RNA–Protein interactions for RNA: ENSMUST00000064098.13

Ldb3-204, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-204ENSMUST00000064098 Ehbp1l1Q99MS7 1716 aa16.96■□□□□ 0.31
Ldb3-204ENSMUST00000064098 4930407I10RikD3Z5T8 1512 aa16.96■□□□□ 0.31
Ldb3-204ENSMUST00000064098 Tulp4Q9JIL5 1547 aa16.95■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Mroh1E0CZ22 1640 aa16.94■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Polr3aB2RXC6 1390 aa16.94■□□□□ 0.3
Ldb3-204ENSMUST00000064098 AU022751B1B0V2 589 aa16.93■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Mbd5B1AYB6 1498 aa16.93■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Prrc2bQ7TPM1 1486 aaKnown RBP16.93■□□□□ 0.3
Ldb3-204ENSMUST00000064098 PtprmP28828 1452 aa16.92■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Itsn1Q9Z0R4 1714 aa16.92■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Naip7Q9JIB3 1402 aa16.92■□□□□ 0.3
Ldb3-204ENSMUST00000064098 ClspnQ80YR7 1315 aa16.92■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Mug2P28666 1451 aa16.92■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Cpsf1Q9EPU4 1441 aaKnown RBP16.91■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Kif13aQ9EQW7 1749 aa16.91■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Iqgap1Q9JKF1 1657 aaKnown RBP16.91■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Kdm2aP59997 1161 aa16.9■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Bcl9Q9D219 1425 aa16.9■□□□□ 0.3
Ldb3-204ENSMUST00000064098 Dapk1Q80YE7 1442 aa16.88■□□□□ 0.29
Ldb3-204ENSMUST00000064098 Rims1Q99NE5 1463 aa16.88■□□□□ 0.29
Ldb3-204ENSMUST00000064098 Cdk13Q69ZA1 1511 aaKnown RBP16.88■□□□□ 0.29
Ldb3-204ENSMUST00000064098 Chd2E9PZM4 1827 aaKnown RBP16.87■□□□□ 0.29
Ldb3-204ENSMUST00000064098 Rundc1Q0VDN7 615 aa16.86■□□□□ 0.29
Ldb3-204ENSMUST00000064098 P3h3Q8CG70 732 aa16.86■□□□□ 0.29
Ldb3-204ENSMUST00000064098 Txndc2Q6P902 515 aa16.86■□□□□ 0.29
Ldb3-204ENSMUST00000064098 GphnQ8BUV3 769 aaKnown RBP16.85■□□□□ 0.29
Ldb3-204ENSMUST00000064098 Srpk2O54781 681 aaKnown RBP16.84■□□□□ 0.29
Ldb3-204ENSMUST00000064098 Kdm5aQ3UXZ9 1690 aa16.83■□□□□ 0.29
Ldb3-204ENSMUST00000064098 Gm20521D3Z5F7 333 aa16.83■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Fan1Q69ZT1 1020 aa16.83■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Card11Q8CIS0 1159 aa16.82■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Os9Q8K2C7 672 aa16.82■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Myo3aQ8K3H5 1613 aa16.82■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Psme1P97371 249 aa16.81■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Atp1b4Q99ME6 356 aa16.81■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Plxnc1Q9QZC2 1574 aa16.81■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Brwd3A2AHJ4 1799 aa16.8■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Sin3aQ60520 1274 aaKnown RBP16.8■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Topaz1E5FYH1 1653 aa16.8■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Shq1Q7TMX5 569 aa16.79■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Slc52a2Q9D8F3 450 aa16.79■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Cep152A2AUM9 1736 aaKnown RBP16.79■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Arid4bA2CG63 1314 aaKnown RBP16.79■□□□□ 0.28
Ldb3-204ENSMUST00000064098 RalgapbQ8BQZ4 1484 aa16.79■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Myom1Q62234 1667 aaKnown RBP16.78■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Puf60Q3UEB3 564 aaKnown RBP16.77■□□□□ 0.28
Ldb3-204ENSMUST00000064098 Q9D9H8 365 aa16.77■□□□□ 0.28
Ldb3-204ENSMUST00000064098 IghaA0A0A6YXW6 389 aa16.77■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Gemin5Q8BX17 1502 aaKnown RBP16.77■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Gm13695A2AK44 830 aa16.76■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Zc3h13E9Q784 1729 aaKnown RBP16.76■□□□□ 0.27
Ldb3-204ENSMUST00000064098 PplQ9R269 1755 aa16.75■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Asxl2Q8BZ32 1370 aa16.75■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Cdk5rap2Q8K389 1822 aa16.73■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Usp40Q8BWR4 1235 aa16.72■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Arhgef28P97433 1693 aa16.71■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Zbtb4Q5F293 982 aa16.71■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Srcin1Q9QWI6 1250 aa16.71■□□□□ 0.27
Ldb3-204ENSMUST00000064098 Cwc22Q8C5N3 908 aaKnown RBP16.7■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Stk26Q99JT2 416 aa16.69■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Scaf11E9PZM7 1456 aaKnown RBP16.69■□□□□ 0.26
Ldb3-204ENSMUST00000064098 PalldQ9ET54 1408 aa16.69■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Setd1aE9PYH6 1716 aa16.68■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Eif2ak4Q9QZ05 1648 aa16.68■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Gtf2e1Q9D0D5 440 aa16.68■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Stard8Q8K031 1019 aa16.67■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Lrrc7Q80TE7 1490 aa16.67■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Rock2P70336 1388 aa16.67■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Nphp4P59240 1425 aa16.66■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Dip2aQ8BWT5 1523 aa16.66■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Rimbp3Q3V0F0 1606 aa16.66■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Slit3Q9WVB4 1523 aa16.65■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Cyb5rlB1AS42 316 aa16.65■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Stag3O70576 1240 aa16.65■□□□□ 0.26
Ldb3-204ENSMUST00000064098 Utp14aQ640M1 767 aaKnown RBP16.65■□□□□ 0.26
Ldb3-204ENSMUST00000064098 IqubQ8CDK3 788 aa16.64■□□□□ 0.25
Ldb3-204ENSMUST00000064098 Sipa1l1Q8C0T5 1782 aa16.63■□□□□ 0.25
Ldb3-204ENSMUST00000064098 Mapk8ip2Q9ERE9 830 aa16.63■□□□□ 0.25
Ldb3-204ENSMUST00000064098 Ncoa1P70365 1447 aa16.63■□□□□ 0.25
Ldb3-204ENSMUST00000064098 MaddQ80U28 1577 aa16.62■□□□□ 0.25
Ldb3-204ENSMUST00000064098 Lmtk3Q5XJV6 1424 aa16.62■□□□□ 0.25
Ldb3-204ENSMUST00000064098 DnmbpQ6TXD4 1580 aa16.62■□□□□ 0.25
Ldb3-204ENSMUST00000064098 PzpQ61838 1495 aa16.62■□□□□ 0.25
Ldb3-204ENSMUST00000064098 Rims2Q9EQZ7 1530 aa16.62■□□□□ 0.25
Ldb3-204ENSMUST00000064098 Cep170bQ80U49 1574 aa16.59■□□□□ 0.25
Ldb3-204ENSMUST00000064098 HnrnpmQ9D0E1 729 aaKnown RBP16.58■□□□□ 0.25
Ldb3-204ENSMUST00000064098 Pik3r4Q8VD65 1358 aa16.58■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Scn4aQ9ER60 1841 aa16.57■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Pip4k2bQ80XI4 416 aa16.57■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Pola1P33609 1465 aa16.57■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Phlpp1Q8CHE4 1687 aa16.57■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Ift172Q6VH22 1749 aa16.55■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Plekhg1F6S200 1446 aa16.55■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Slc24a1Q91WD8 1130 aa16.54■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Plekhg5Q66T02 1073 aa16.53■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Atp2b2Q9R0K7 1198 aa16.53■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Mink1Q9JM52 1308 aa16.53■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Myt1Q8CFC2 1127 aa16.53■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Arap3Q8R5G7 1538 aa16.52■□□□□ 0.24
Ldb3-204ENSMUST00000064098 Rapgef3Q8VCC8 918 aa16.52■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms