RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Atp1b4Q99ME6 356 aa13.21□□□□□ -0.29
Trim17-201ENSMUST00000047697 Mlh3A0A1Y7VMP7 1443 aa13.21□□□□□ -0.29
Trim17-201ENSMUST00000047697 Map3k5O35099 1380 aa13.21□□□□□ -0.29
Trim17-201ENSMUST00000047697 Arhgef11Q68FM7 1552 aa13.21□□□□□ -0.29
Trim17-201ENSMUST00000047697 Kdm2bQ6P1G2 1309 aa13.21□□□□□ -0.29
Trim17-201ENSMUST00000047697 Vsig10D3YX43 558 aa13.21□□□□□ -0.3
Trim17-201ENSMUST00000047697 Ksr2Q3UVC0 959 aa13.21□□□□□ -0.3
Trim17-201ENSMUST00000047697 TnikP83510 1323 aa13.2□□□□□ -0.3
Trim17-201ENSMUST00000047697 Mfap1aC0HKD8 439 aaKnown RBP13.2□□□□□ -0.3
Trim17-201ENSMUST00000047697 Mfap1bC0HKD9 439 aaKnown RBP13.2□□□□□ -0.3
Trim17-201ENSMUST00000047697 Usp40Q8BWR4 1235 aa13.2□□□□□ -0.3
Trim17-201ENSMUST00000047697 Arhgap5P97393 1501 aa13.2□□□□□ -0.3
Trim17-201ENSMUST00000047697 Sall3Q62255 1320 aa13.2□□□□□ -0.3
Trim17-201ENSMUST00000047697 Plcb2A3KGF7 1181 aa13.19□□□□□ -0.3
Trim17-201ENSMUST00000047697 Kif3bQ61771 747 aa13.19□□□□□ -0.3
Trim17-201ENSMUST00000047697 AU015836B2RUM3 263 aa13.19□□□□□ -0.3
Trim17-201ENSMUST00000047697 Ipo4Q8VI75 1082 aa13.19□□□□□ -0.3
Trim17-201ENSMUST00000047697 Ak9G3UYQ4 1894 aa13.19□□□□□ -0.3
Trim17-201ENSMUST00000047697 Ssh2Q5SW75 1423 aa13.19□□□□□ -0.3
Trim17-201ENSMUST00000047697 DekQ7TNV0 380 aaKnown RBP13.19□□□□□ -0.3
Trim17-201ENSMUST00000047697 Ralbp1Q62172 648 aa13.18□□□□□ -0.3
Trim17-201ENSMUST00000047697 Znf330Q922H9 316 aa13.18□□□□□ -0.3
Trim17-201ENSMUST00000047697 U2af1Q9D883 239 aaKnown RBP13.18□□□□□ -0.3
Trim17-201ENSMUST00000047697 Stag3O70576 1240 aa13.18□□□□□ -0.3
Trim17-201ENSMUST00000047697 Trim58Q5NCC9 485 aa13.17□□□□□ -0.3
Trim17-201ENSMUST00000047697 Caskin1Q6P9K8 1431 aa13.16□□□□□ -0.3
Trim17-201ENSMUST00000047697 Kif21bQ9QXL1 1668 aa13.16□□□□□ -0.3
Trim17-201ENSMUST00000047697 Atxn3Q9CVD2 355 aa13.16□□□□□ -0.3
Trim17-201ENSMUST00000047697 Tnpo1Q8BFY9 898 aaKnown RBP13.16□□□□□ -0.3
Trim17-201ENSMUST00000047697 Gas2l2Q5SSG4 860 aa13.15□□□□□ -0.3
Trim17-201ENSMUST00000047697 Fgd1P52734 960 aa13.15□□□□□ -0.3
Trim17-201ENSMUST00000047697 Trappc8E9PWG2 1437 aa13.15□□□□□ -0.3
Trim17-201ENSMUST00000047697 Neo1P97798 1493 aa13.14□□□□□ -0.31
Trim17-201ENSMUST00000047697 Abca16E9PWJ7 1678 aa13.14□□□□□ -0.31
Trim17-201ENSMUST00000047697 PtprgQ05909 1442 aa13.14□□□□□ -0.31
Trim17-201ENSMUST00000047697 GsdmaQ9EST1 446 aa13.14□□□□□ -0.31
Trim17-201ENSMUST00000047697 Kiaa1551Q5DTW7 1521 aa13.13□□□□□ -0.31
Trim17-201ENSMUST00000047697 Ppp1r9bQ6R891 817 aaKnown RBP13.13□□□□□ -0.31
Trim17-201ENSMUST00000047697 Cdc42bpaQ3UU96 1719 aa13.13□□□□□ -0.31
Trim17-201ENSMUST00000047697 Apaf1O88879 1249 aa13.12□□□□□ -0.31
Trim17-201ENSMUST00000047697 Ylpm1Q9R0I7 1386 aaKnown RBP13.12□□□□□ -0.31
Trim17-201ENSMUST00000047697 Senp3Q9EP97 568 aaKnown RBP13.12□□□□□ -0.31
Trim17-201ENSMUST00000047697 Exosc9Q9JHI7 438 aaKnown RBP13.12□□□□□ -0.31
Trim17-201ENSMUST00000047697 Dot1lQ6XZL8 1540 aa13.12□□□□□ -0.31
Trim17-201ENSMUST00000047697 Kdm5cP41230 1554 aa13.12□□□□□ -0.31
Trim17-201ENSMUST00000047697 Tex14Q7M6U3 1450 aa13.12□□□□□ -0.31
Trim17-201ENSMUST00000047697 Mapkbp1Q6NS57 1503 aa13.11□□□□□ -0.31
Trim17-201ENSMUST00000047697 Ppp2r3aB2RXC8 1150 aa13.1□□□□□ -0.31
Trim17-201ENSMUST00000047697 Tsen2Q6P7W5 460 aa13.1□□□□□ -0.31
Trim17-201ENSMUST00000047697 Nsd2Q8BVE8 1365 aa13.1□□□□□ -0.31
Trim17-201ENSMUST00000047697 Pknox2Q8BG99 474 aa13.1□□□□□ -0.31
Trim17-201ENSMUST00000047697 Nup160Q9Z0W3 1402 aaKnown RBP13.1□□□□□ -0.31
Trim17-201ENSMUST00000047697 Lrrc9Q8CDN9 1456 aa13.1□□□□□ -0.31
Trim17-201ENSMUST00000047697 Rabep1O35551 862 aa13.09□□□□□ -0.31
Trim17-201ENSMUST00000047697 Map7O88735 730 aa13.09□□□□□ -0.31
Trim17-201ENSMUST00000047697 IqubQ8CDK3 788 aa13.09□□□□□ -0.31
Trim17-201ENSMUST00000047697 Sptbn5F6UCX4 1208 aa13.09□□□□□ -0.31
Trim17-201ENSMUST00000047697 Ccar1Q8CH18 1146 aaKnown RBP13.09□□□□□ -0.31
Trim17-201ENSMUST00000047697 Prdm16A2A935 1275 aa13.08□□□□□ -0.32
Trim17-201ENSMUST00000047697 Trim44Q9QXA7 346 aa13.08□□□□□ -0.32
Trim17-201ENSMUST00000047697 Arid3cA6PWV5 409 aa13.08□□□□□ -0.32
Trim17-201ENSMUST00000047697 Tmco5bQ80X59 307 aa13.08□□□□□ -0.32
Trim17-201ENSMUST00000047697 Stk26Q99JT2 416 aa13.08□□□□□ -0.32
Trim17-201ENSMUST00000047697 Duxf3A0A0N4SV92 674 aa13.07□□□□□ -0.32
Trim17-201ENSMUST00000047697 Znf692Q3U381 531 aa13.07□□□□□ -0.32
Trim17-201ENSMUST00000047697 Rlbp1Q9Z275 317 aa13.07□□□□□ -0.32
Trim17-201ENSMUST00000047697 Atf7ipQ7TT18 1306 aa13.06□□□□□ -0.32
Trim17-201ENSMUST00000047697 Rfx1P48377 963 aa13.06□□□□□ -0.32
Trim17-201ENSMUST00000047697 GorabQ8BRM2 368 aa13.06□□□□□ -0.32
Trim17-201ENSMUST00000047697 Tarbp1E9Q368 1579 aa13.06□□□□□ -0.32
Trim17-201ENSMUST00000047697 Gm16486A0A1D5RMD1 1434 aa13.06□□□□□ -0.32
Trim17-201ENSMUST00000047697 Uspl1Q3ULM6 1089 aa13.06□□□□□ -0.32
Trim17-201ENSMUST00000047697 Trpm2Q91YD4 1506 aa13.06□□□□□ -0.32
Trim17-201ENSMUST00000047697 Plch2A2AP18 1501 aa13.06□□□□□ -0.32
Trim17-201ENSMUST00000047697 Stard8Q8K031 1019 aa13.06□□□□□ -0.32
Trim17-201ENSMUST00000047697 ErbinQ80TH2 1402 aa13.05□□□□□ -0.32
Trim17-201ENSMUST00000047697 Puf60Q3UEB3 564 aaKnown RBP13.05□□□□□ -0.32
Trim17-201ENSMUST00000047697 Fmn2Q9JL04 1578 aa13.05□□□□□ -0.32
Trim17-201ENSMUST00000047697 Fancd2Q80V62 1450 aa13.05□□□□□ -0.32
Trim17-201ENSMUST00000047697 Pdcl3Q8BVF2 240 aa13.04□□□□□ -0.32
Trim17-201ENSMUST00000047697 Ccdc60Q8C4J0 545 aa13.04□□□□□ -0.32
Trim17-201ENSMUST00000047697 Adgrl2Q8JZZ7 1487 aa13.04□□□□□ -0.32
Trim17-201ENSMUST00000047697 SlkO54988 1233 aa13.04□□□□□ -0.32
Trim17-201ENSMUST00000047697 Nutm1Q8BHP2 1126 aa13.04□□□□□ -0.32
Trim17-201ENSMUST00000047697 Sbno1Q689Z5 1390 aa13.04□□□□□ -0.32
Trim17-201ENSMUST00000047697 Mroh2aD3Z750 1679 aa13.03□□□□□ -0.32
Trim17-201ENSMUST00000047697 Ttc41Q692V3 1318 aa13.03□□□□□ -0.32
Trim17-201ENSMUST00000047697 Abcc2Q8VI47 1543 aa13.02□□□□□ -0.32
Trim17-201ENSMUST00000047697 Taok2Q6ZQ29 1240 aa13.02□□□□□ -0.33
Trim17-201ENSMUST00000047697 KnstrnQ9D9Z1 312 aaKnown RBP13.02□□□□□ -0.33
Trim17-201ENSMUST00000047697 Lemd3Q9WU40 921 aa13.02□□□□□ -0.33
Trim17-201ENSMUST00000047697 Usp19Q3UJD6 1360 aa13.02□□□□□ -0.33
Trim17-201ENSMUST00000047697 Gapvd1Q6PAR5 1458 aa13.02□□□□□ -0.33
Trim17-201ENSMUST00000047697 Eif4g3Q80XI3 1579 aaKnown RBP13.01□□□□□ -0.33
Trim17-201ENSMUST00000047697 Atl3Q91YH5 541 aa13.01□□□□□ -0.33
Trim17-201ENSMUST00000047697 Pnmal2G3X9N3 661 aa13.01□□□□□ -0.33
Trim17-201ENSMUST00000047697 Rtn4Q99P72 1162 aaKnown RBP13□□□□□ -0.33
Trim17-201ENSMUST00000047697 Iqgap1Q9JKF1 1657 aaKnown RBP13□□□□□ -0.33
Trim17-201ENSMUST00000047697 Nectin2P32507 530 aa13□□□□□ -0.33
Trim17-201ENSMUST00000047697 Ssh1Q76I79 1042 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms