RNA–Protein interactions for RNA: ENSMUST00000044163.9

Cnot4-201, Transcript of CCR4-NOT transcription complex subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cnot4, Length 3,337 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot4-201ENSMUST00000044163 Kank1E9Q238 1360 aa8.41□□□□□ -1.06
Cnot4-201ENSMUST00000044163 PtprtQ99M80 1454 aa8.41□□□□□ -1.06
Cnot4-201ENSMUST00000044163 MyclP10166 368 aa8.41□□□□□ -1.06
Cnot4-201ENSMUST00000044163 Hdac5Q9Z2V6 1113 aa8.41□□□□□ -1.06
Cnot4-201ENSMUST00000044163 Myo5cE9Q1F5 1742 aa8.4□□□□□ -1.06
Cnot4-201ENSMUST00000044163 Tex14Q7M6U3 1450 aa8.4□□□□□ -1.06
Cnot4-201ENSMUST00000044163 Wdr43Q6ZQL4 677 aaKnown RBP8.4□□□□□ -1.06
Cnot4-201ENSMUST00000044163 Znf518aB2RRF6 1478 aaKnown RBP8.4□□□□□ -1.06
Cnot4-201ENSMUST00000044163 Erbb3Q61526 1339 aa8.39□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Pank3Q8R2W9 370 aa8.39□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Ttbk1Q6PCN3 1308 aa8.39□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Styxl1Q9DAR2 321 aa8.39□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Mroh3A0A1D5RM54 893 aa8.39□□□□□ -1.07
Cnot4-201ENSMUST00000044163 ArsiQ32KI9 573 aa8.39□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Topbp1Q6ZQF0 1515 aa8.38□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Zscan21Q07231 555 aa8.38□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Q7TT23 1179 aa8.38□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Supt16hQ920B9 1047 aa8.38□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Gm16486A0A1D5RMD1 1434 aa8.38□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Mink1Q9JM52 1308 aa8.38□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Iqgap3F8VQ29 1632 aa8.38□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Arid4bA2CG63 1314 aaKnown RBP8.38□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Trpm1Q2TV84 1622 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Abca6Q8K441 1624 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Abca8aQ8K442 1620 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Ttc21bQ0HA38 1315 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Sall3Q62255 1320 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Zscan10Q3URR7 782 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Ecm2Q5FW85 670 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Inpp5dQ9ES52 1191 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Sox12Q04890 314 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Zfp444Q3TDV8 331 aaKnown RBP8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Liat1Q810M6 228 aa8.37□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Mak16Q8BGS0 296 aaKnown RBP8.36□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Rims1Q99NE5 1463 aa8.36□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Cep152A2AUM9 1736 aaKnown RBP8.35□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Itsn2Q9Z0R6 1659 aa8.35□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Clasp1Q80TV8 1535 aaKnown RBP8.35□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Kif3bQ61771 747 aa8.35□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Tmf1B9EKI3 1091 aa8.34□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Zbtb4Q5F293 982 aa8.34□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Srcin1Q9QWI6 1250 aa8.34□□□□□ -1.07
Cnot4-201ENSMUST00000044163 AatkQ80YE4 1365 aa8.34□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Anp32bQ9EST5 272 aaKnown RBP8.34□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Adgrb3Q80ZF8 1522 aa8.34□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Prex1Q69ZK0 1650 aa8.34□□□□□ -1.07
Cnot4-201ENSMUST00000044163 Ttc41Q692V3 1318 aa8.34□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Depdc5P61460 1591 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Tecpr2Q3UH45 1423 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 WdpcpQ8C456 722 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Atf7ipQ7TT18 1306 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Myo3aQ8K3H5 1613 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Prdm10Q3UTQ7 1184 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Lemd3Q9WU40 921 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Nphp4P59240 1425 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 ErbinQ80TH2 1402 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Col17a1Q07563 1470 aa8.33□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Ppp2r1aQ76MZ3 589 aa8.32□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Atp10aO54827 1508 aa8.32□□□□□ -1.08
Cnot4-201ENSMUST00000044163 DnmbpQ6TXD4 1580 aa8.32□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Kcnh8P59111 1102 aa8.32□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Fam184bQ0KK56 942 aa8.32□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Myom2Q14BI5 1463 aa8.32□□□□□ -1.08
Cnot4-201ENSMUST00000044163 AglF8VPN4 1532 aa8.32□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Egfem1Q8C088 590 aa8.32□□□□□ -1.08
Cnot4-201ENSMUST00000044163 TnikP83510 1323 aa8.31□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Efcab6Q6P1E8 1516 aa8.31□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Rab3gap2Q8BMG7 1366 aa8.31□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Erich6D3Z6S9 713 aa8.31□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Ifnlr1Q8CGK5 535 aa8.31□□□□□ -1.08
Cnot4-201ENSMUST00000044163 OvosQ3UU35 1456 aa8.3□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Cdk5rap2Q8K389 1822 aa8.3□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Ehbp1l1Q99MS7 1716 aa8.3□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Akap12Q9WTQ5 1684 aa8.3□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Talpid3E9PV87 1520 aa8.3□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Upf2A2AT37 1269 aaKnown RBP8.3□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Arid3cA6PWV5 409 aa8.3□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Kdm2aP59997 1161 aa8.3□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Stard8Q8K031 1019 aa8.3□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Rtl5Q5DTT4 599 aa8.29□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Ino80Q6ZPV2 1559 aa8.29□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Cdc42bpgQ80UW5 1551 aa8.29□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Gprasp1Q5U4C1 1347 aa8.29□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Gm20521D3Z5F7 333 aa8.29□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Pak3Q61036 559 aa8.29□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Sipa1l1Q8C0T5 1782 aa8.29□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Esx1O88933 382 aa8.28□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Gtf2e1Q9D0D5 440 aa8.28□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Uggt1Q6P5E4 1551 aa8.28□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Usp40Q8BWR4 1235 aa8.28□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Myom1Q62234 1667 aaKnown RBP8.28□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Kif16bB1AVY7 1312 aa8.28□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Prdm2A2A7B5 1709 aaKnown RBP8.28□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Prkrip1Q9CWV6 186 aaKnown RBP8.28□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Gli2Q0VGT2 1544 aa8.27□□□□□ -1.08
Cnot4-201ENSMUST00000044163 Tcerg1Q8CGF7 1100 aaKnown RBP8.27□□□□□ -1.09
Cnot4-201ENSMUST00000044163 Stk24Q99KH8 431 aa8.27□□□□□ -1.09
Cnot4-201ENSMUST00000044163 Kdm5aQ3UXZ9 1690 aa8.27□□□□□ -1.09
Cnot4-201ENSMUST00000044163 Ptch1Q61115 1434 aa8.27□□□□□ -1.09
Cnot4-201ENSMUST00000044163 Kiaa0556Q8C753 1610 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 59.4 ms