RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Calr4Q3TQS0 420 aa11.48□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 AatkQ80YE4 1365 aa11.48□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Adgrl3Q80TS3 1537 aa11.47□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Myo3aQ8K3H5 1613 aa11.47□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Iqgap3F8VQ29 1632 aa11.46□□□□□ -0.57
Ptchd1-201ENSMUST00000038665 Rad21Q61550 635 aaKnown RBP11.46□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Usp40Q8BWR4 1235 aa11.46□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Uggt2E9Q4X2 1504 aa11.45□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Ofd1Q80Z25 1017 aa11.45□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Srpk2O54781 681 aaKnown RBP11.45□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Tubgcp6G5E8P0 1769 aa11.44□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 AU022751B1B0V2 589 aa11.44□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Zscan10Q3URR7 782 aa11.44□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Dnajc5gQ8C632 165 aa11.44□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Topbp1Q6ZQF0 1515 aa11.43□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Clasp1Q80TV8 1535 aaKnown RBP11.43□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 RereQ80TZ9 1558 aa11.43□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 AdgbG3UZ78 1657 aa11.42□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Zranb1Q7M760 708 aa11.42□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Ttbk1Q6PCN3 1308 aa11.42□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Kcnh8P59111 1102 aa11.41□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 L3mbtl2P59178 703 aa11.41□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Atp10aO54827 1508 aa11.41□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Cfap65Q3V0B4 1847 aa11.41□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Abca8aQ8K442 1620 aa11.41□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Puf60Q3UEB3 564 aaKnown RBP11.41□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Gtf2e1Q9D0D5 440 aa11.41□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 AglF8VPN4 1532 aa11.41□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Stk26Q99JT2 416 aa11.4□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Adgrb3Q80ZF8 1522 aa11.4□□□□□ -0.58
Ptchd1-201ENSMUST00000038665 Atp1b4Q99ME6 356 aa11.39□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Tmf1B9EKI3 1091 aa11.39□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Afap1Q80YS6 731 aa11.39□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Fam184bQ0KK56 942 aa11.39□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Setd1aE9PYH6 1716 aa11.38□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Esx1O88933 382 aa11.38□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Nolc1E9Q5C9 702 aaKnown RBP11.38□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Cdc42bpgQ80UW5 1551 aa11.37□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Rims1Q99NE5 1463 aa11.37□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Zfp444Q3TDV8 331 aaKnown RBP11.37□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Pola1P33609 1465 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Gm16486A0A1D5RMD1 1434 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Erbb3Q61526 1339 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 CenpbP27790 599 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Zscan21Q07231 555 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Ecm2Q5FW85 670 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Ppp2r1aQ76MZ3 589 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Cul9Q80TT8 1865 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Ehbp1l1Q99MS7 1716 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Plch2A2AP18 1501 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Dcaf11Q91VU6 549 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Cdk5rap2Q8K389 1822 aa11.36□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Kif7B7ZNG0 1348 aa11.35□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Stag3O70576 1240 aa11.35□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Slc4a3P16283 1227 aa11.35□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Prdm2A2A7B5 1709 aaKnown RBP11.35□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 CrbnQ8C7D2 445 aa11.35□□□□□ -0.59
Ptchd1-201ENSMUST00000038665 Asxl2Q8BZ32 1370 aa11.33□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Fam71e1A1L3C1 212 aa11.33□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Cep152A2AUM9 1736 aaKnown RBP11.33□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Ppp4r2Q0VGB7 417 aa11.32□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Shq1Q7TMX5 569 aa11.32□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Trpm1Q2TV84 1622 aa11.32□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Anp32bQ9EST5 272 aaKnown RBP11.32□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Hdac5Q9Z2V6 1113 aa11.32□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Knl1Q66JQ7 1612 aa11.32□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Ino80Q6ZPV2 1559 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Nphp4P59240 1425 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Sbno1Q689Z5 1390 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Lrrc7Q80TE7 1490 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Akap12Q9WTQ5 1684 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Efcab6Q6P1E8 1516 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Mak16Q8BGS0 296 aaKnown RBP11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Q9D9H8 365 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Skint5A7XUY5 1461 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Ttc37F8VPK0 1563 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Itsn2Q9Z0R6 1659 aa11.31□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Mink1Q9JM52 1308 aa11.3□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Myom2Q14BI5 1463 aa11.3□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Prrc2bQ7TPM1 1486 aaKnown RBP11.3□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Tex14Q7M6U3 1450 aa11.3□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Talpid3E9PV87 1520 aa11.29□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Tcerg1Q8CGF7 1100 aaKnown RBP11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 PtprmP28828 1452 aa11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Zmym4A2A791 1549 aaKnown RBP11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Mroh1E0CZ22 1640 aa11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Kiaa0556Q8C753 1610 aa11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Neurod2Q62414 383 aa11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Qser1A2BIE1 1698 aa11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Rab3gap2Q8BMG7 1366 aa11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Tecpr2Q3UH45 1423 aa11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Nlrp6Q91WS2 869 aa11.28□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Cep170bQ80U49 1574 aa11.27□□□□□ -0.6
Ptchd1-201ENSMUST00000038665 Hecw2Q6I6G8 1578 aa11.27□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 P2rx7Q9Z1M0 595 aa11.27□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Ahdc1Q6PAL7 1594 aaKnown RBP11.26□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Myom1Q62234 1667 aaKnown RBP11.26□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Apbb1Q9QXJ1 710 aa11.26□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 Synj2Q9D2G5 1434 aa11.26□□□□□ -0.61
Ptchd1-201ENSMUST00000038665 PalldQ9ET54 1408 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms