RNA–Protein interactions for RNA: ENSMUST00000033407.12

Cttn-201, Transcript of Src substrate cortactin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cttn, Length 2,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cttn-201ENSMUST00000033407 Kif21bQ9QXL1 1668 aa15.58■□□□□ 0.09
Cttn-201ENSMUST00000033407 Supt16hQ920B9 1047 aa15.58■□□□□ 0.09
Cttn-201ENSMUST00000033407 Cypt2Q6P924 180 aa15.57■□□□□ 0.08
Cttn-201ENSMUST00000033407 Fhad1A6PWD2 1420 aa15.57■□□□□ 0.08
Cttn-201ENSMUST00000033407 ShprhQ7TPQ3 1674 aa15.57■□□□□ 0.08
Cttn-201ENSMUST00000033407 Akap12Q9WTQ5 1684 aa15.56■□□□□ 0.08
Cttn-201ENSMUST00000033407 Nyap1Q6PFX7 833 aa15.56■□□□□ 0.08
Cttn-201ENSMUST00000033407 Fnbp4Q6ZQ03 1031 aa15.56■□□□□ 0.08
Cttn-201ENSMUST00000033407 Pik3c2aQ61194 1686 aa15.55■□□□□ 0.08
Cttn-201ENSMUST00000033407 Plekhh2Q8C115 1491 aa15.55■□□□□ 0.08
Cttn-201ENSMUST00000033407 3425401B19RikD3Z1D3 1412 aa15.55■□□□□ 0.08
Cttn-201ENSMUST00000033407 Ssh2Q5SW75 1423 aa15.55■□□□□ 0.08
Cttn-201ENSMUST00000033407 Adgrl1Q80TR1 1466 aa15.54■□□□□ 0.08
Cttn-201ENSMUST00000033407 Setd1aE9PYH6 1716 aa15.54■□□□□ 0.08
Cttn-201ENSMUST00000033407 Thsd7aQ69ZU6 1645 aa15.54■□□□□ 0.08
Cttn-201ENSMUST00000033407 Brinp3Q499E0 766 aa15.53■□□□□ 0.08
Cttn-201ENSMUST00000033407 Eif2ak4Q9QZ05 1648 aa15.53■□□□□ 0.08
Cttn-201ENSMUST00000033407 Col18a1P39061 1774 aa15.53■□□□□ 0.08
Cttn-201ENSMUST00000033407 Il16O54824 1322 aa15.52■□□□□ 0.07
Cttn-201ENSMUST00000033407 Arap3Q8R5G7 1538 aa15.51■□□□□ 0.07
Cttn-201ENSMUST00000033407 Itsn1Q9Z0R4 1714 aa15.51■□□□□ 0.07
Cttn-201ENSMUST00000033407 Gimap5Q8BWF2 308 aa15.5■□□□□ 0.07
Cttn-201ENSMUST00000033407 Washc2Q6PGL7 1334 aa15.5■□□□□ 0.07
Cttn-201ENSMUST00000033407 Kif13aQ9EQW7 1749 aa15.48■□□□□ 0.07
Cttn-201ENSMUST00000033407 Kif1bQ60575 1816 aaKnown RBP15.48■□□□□ 0.07
Cttn-201ENSMUST00000033407 Pde4cQ3UEI1 686 aa15.48■□□□□ 0.07
Cttn-201ENSMUST00000033407 Txndc2Q6P902 515 aa15.47■□□□□ 0.07
Cttn-201ENSMUST00000033407 Wdr43Q6ZQL4 677 aaKnown RBP15.47■□□□□ 0.07
Cttn-201ENSMUST00000033407 Lamc1P02468 1607 aaKnown RBP15.47■□□□□ 0.07
Cttn-201ENSMUST00000033407 Ankrd36D3Z4K0 1415 aa15.46■□□□□ 0.07
Cttn-201ENSMUST00000033407 Smg6P61406 1418 aaKnown RBP15.46■□□□□ 0.07
Cttn-201ENSMUST00000033407 Ccer2J3QPU5 274 aa15.46■□□□□ 0.06
Cttn-201ENSMUST00000033407 Slc5a4bQ91ZP4 660 aa15.46■□□□□ 0.06
Cttn-201ENSMUST00000033407 Cabp1Q9JLK7 227 aa15.46■□□□□ 0.06
Cttn-201ENSMUST00000033407 Skint5A7XUY5 1461 aa15.46■□□□□ 0.06
Cttn-201ENSMUST00000033407 Ppp4r2Q0VGB7 417 aa15.45■□□□□ 0.06
Cttn-201ENSMUST00000033407 Tmem131lQ3U3D7 1597 aa15.45■□□□□ 0.06
Cttn-201ENSMUST00000033407 Naip7Q9JIB3 1402 aa15.44■□□□□ 0.06
Cttn-201ENSMUST00000033407 Zranb1Q7M760 708 aa15.44■□□□□ 0.06
Cttn-201ENSMUST00000033407 PalldQ9ET54 1408 aa15.44■□□□□ 0.06
Cttn-201ENSMUST00000033407 Zbtb7cQ8VCZ7 619 aa15.44■□□□□ 0.06
Cttn-201ENSMUST00000033407 Fam50aQ9WV03 339 aaKnown RBP15.43■□□□□ 0.06
Cttn-201ENSMUST00000033407 Myo3aQ8K3H5 1613 aa15.42■□□□□ 0.06
Cttn-201ENSMUST00000033407 Ttc21bQ0HA38 1315 aa15.41■□□□□ 0.06
Cttn-201ENSMUST00000033407 PtprvP70289 1705 aa15.41■□□□□ 0.06
Cttn-201ENSMUST00000033407 Nhsl1Q8CAF4 1587 aa15.4■□□□□ 0.06
Cttn-201ENSMUST00000033407 Cntnap1O54991 1385 aa15.4■□□□□ 0.06
Cttn-201ENSMUST00000033407 AnkarA2RT91 1465 aa15.4■□□□□ 0.06
Cttn-201ENSMUST00000033407 Ino80Q6ZPV2 1559 aa15.4■□□□□ 0.06
Cttn-201ENSMUST00000033407 Hspa5P20029 655 aaKnown RBP15.4■□□□□ 0.06
Cttn-201ENSMUST00000033407 Ehbp1l1Q99MS7 1716 aa15.39■□□□□ 0.05
Cttn-201ENSMUST00000033407 Sema6bO54951 886 aa15.39■□□□□ 0.05
Cttn-201ENSMUST00000033407 Siglec1Q62230 1695 aa15.38■□□□□ 0.05
Cttn-201ENSMUST00000033407 Ttll13A4Q9F6 804 aa15.38■□□□□ 0.05
Cttn-201ENSMUST00000033407 Slc24a1Q91WD8 1130 aa15.38■□□□□ 0.05
Cttn-201ENSMUST00000033407 Qtrt2B8ZXI1 415 aa15.37■□□□□ 0.05
Cttn-201ENSMUST00000033407 IghaA0A0A6YXW6 389 aa15.36■□□□□ 0.05
Cttn-201ENSMUST00000033407 Mia2Q91ZV0 1396 aa15.36■□□□□ 0.05
Cttn-201ENSMUST00000033407 Ylpm1Q9R0I7 1386 aaKnown RBP15.36■□□□□ 0.05
Cttn-201ENSMUST00000033407 Efcab6Q6P1E8 1516 aa15.36■□□□□ 0.05
Cttn-201ENSMUST00000033407 Tns3Q5SSZ5 1440 aa15.35■□□□□ 0.05
Cttn-201ENSMUST00000033407 Psme1P97371 249 aa15.35■□□□□ 0.05
Cttn-201ENSMUST00000033407 Tecpr2Q3UH45 1423 aa15.35■□□□□ 0.05
Cttn-201ENSMUST00000033407 Slain2Q8CI08 581 aa15.35■□□□□ 0.05
Cttn-201ENSMUST00000033407 PplQ9R269 1755 aa15.35■□□□□ 0.05
Cttn-201ENSMUST00000033407 Uggt1Q6P5E4 1551 aa15.33■□□□□ 0.04
Cttn-201ENSMUST00000033407 Ccdc27Q3V036 639 aa15.32■□□□□ 0.04
Cttn-201ENSMUST00000033407 Gm13695A2AK44 830 aa15.31■□□□□ 0.04
Cttn-201ENSMUST00000033407 Evi5lH3BKQ3 813 aa15.3■□□□□ 0.04
Cttn-201ENSMUST00000033407 Slit3Q9WVB4 1523 aa15.3■□□□□ 0.04
Cttn-201ENSMUST00000033407 Dapk1Q80YE7 1442 aa15.3■□□□□ 0.04
Cttn-201ENSMUST00000033407 Eif5bQ05D44 1216 aaKnown RBP15.3■□□□□ 0.04
Cttn-201ENSMUST00000033407 Nwd1A6H603 1563 aa15.3■□□□□ 0.04
Cttn-201ENSMUST00000033407 Upf2A2AT37 1269 aaKnown RBP15.3■□□□□ 0.04
Cttn-201ENSMUST00000033407 Hdac5Q9Z2V6 1113 aa15.29■□□□□ 0.04
Cttn-201ENSMUST00000033407 Atp7aQ64430 1491 aa15.29■□□□□ 0.04
Cttn-201ENSMUST00000033407 Pak3Q61036 559 aa15.28■□□□□ 0.04
Cttn-201ENSMUST00000033407 Liat1Q810M6 228 aa15.28■□□□□ 0.04
Cttn-201ENSMUST00000033407 Chic2Q9D9G3 165 aa15.28■□□□□ 0.04
Cttn-201ENSMUST00000033407 Unc13bQ9Z1N9 1602 aa15.27■□□□□ 0.04
Cttn-201ENSMUST00000033407 Sin3aQ60520 1274 aaKnown RBP15.27■□□□□ 0.04
Cttn-201ENSMUST00000033407 Ccdc9Q8VC31 543 aaKnown RBP15.27■□□□□ 0.04
Cttn-201ENSMUST00000033407 Clstn2Q9ER65 966 aa15.27■□□□□ 0.04
Cttn-201ENSMUST00000033407 Tarbp1E9Q368 1579 aa15.27■□□□□ 0.03
Cttn-201ENSMUST00000033407 Amer1Q7TS75 1132 aa15.27■□□□□ 0.03
Cttn-201ENSMUST00000033407 P3h3Q8CG70 732 aa15.27■□□□□ 0.03
Cttn-201ENSMUST00000033407 MypopQ8R4U1 393 aa15.27■□□□□ 0.03
Cttn-201ENSMUST00000033407 Lrp6O88572 1613 aa15.26■□□□□ 0.03
Cttn-201ENSMUST00000033407 Myom3A2ABU4 1439 aa15.26■□□□□ 0.03
Cttn-201ENSMUST00000033407 Prdm2A2A7B5 1709 aaKnown RBP15.26■□□□□ 0.03
Cttn-201ENSMUST00000033407 Nsd2Q8BVE8 1365 aa15.25■□□□□ 0.03
Cttn-201ENSMUST00000033407 Prrc2bQ7TPM1 1486 aaKnown RBP15.25■□□□□ 0.03
Cttn-201ENSMUST00000033407 Col22a1E9Q7P1 1613 aa15.24■□□□□ 0.03
Cttn-201ENSMUST00000033407 Arhgef28P97433 1693 aa15.24■□□□□ 0.03
Cttn-201ENSMUST00000033407 Dmrt2Q8BG36 561 aa15.24■□□□□ 0.03
Cttn-201ENSMUST00000033407 Zfp142G5E869 1843 aa15.24■□□□□ 0.03
Cttn-201ENSMUST00000033407 Ildr2B5TVM2 661 aa15.23■□□□□ 0.03
Cttn-201ENSMUST00000033407 Abcc10Q8R4P9 1501 aa15.23■□□□□ 0.03
Cttn-201ENSMUST00000033407 Ybx3Q9JKB3 361 aaKnown RBP15.23■□□□□ 0.03
Cttn-201ENSMUST00000033407 Atf3Q60765 181 aa15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms