RNA–Protein interactions for RNA: ENSMUST00000028003.8

Lmx1a-201, Transcript of LIM homeobox transcription factor 1-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lmx1a, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1a-201ENSMUST00000028003 Myo5cE9Q1F5 1742 aa11.42□□□□□ -0.58
Lmx1a-201ENSMUST00000028003 CltcQ68FD5 1675 aaKnown RBP11.42□□□□□ -0.58
Lmx1a-201ENSMUST00000028003 Naip5Q9R016 1403 aa11.41□□□□□ -0.58
Lmx1a-201ENSMUST00000028003 UacaQ8CGB3 1411 aa11.41□□□□□ -0.58
Lmx1a-201ENSMUST00000028003 Topaz1E5FYH1 1653 aa11.41□□□□□ -0.58
Lmx1a-201ENSMUST00000028003 4930407I10RikD3Z5T8 1512 aa11.4□□□□□ -0.58
Lmx1a-201ENSMUST00000028003 Armcx1Q9CX83 456 aa11.4□□□□□ -0.58
Lmx1a-201ENSMUST00000028003 3425401B19RikD3Z1D3 1412 aa11.4□□□□□ -0.58
Lmx1a-201ENSMUST00000028003 Vps8Q0P5W1 1427 aa11.39□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Afap1Q80YS6 731 aa11.39□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Rrp7aQ9D1C9 280 aaKnown RBP11.39□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 MyclP10166 368 aa11.39□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Spag9Q58A65 1321 aaKnown RBP11.38□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Abcc6Q9R1S7 1498 aa11.38□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Dip2aQ8BWT5 1523 aa11.38□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Usp54Q8BL06 1588 aaKnown RBP11.38□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 CanxP35564 591 aaKnown RBP11.36□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Zbtb7cQ8VCZ7 619 aa11.36□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Kif3bQ61771 747 aa11.35□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Rbm10Q99KG3 930 aaKnown RBP11.35□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Ssh2Q5SW75 1423 aa11.35□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 ShprhQ7TPQ3 1674 aa11.35□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Hfm1D3Z4R1 1434 aa11.34□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Scaf1Q5U4C3 1256 aaKnown RBP11.34□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Lmtk3Q5XJV6 1424 aa11.34□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Mrs2Q5NCE8 434 aa11.34□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Sin3aQ60520 1274 aaKnown RBP11.34□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Clstn2Q9ER65 966 aa11.34□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Kif1bQ60575 1816 aaKnown RBP11.34□□□□□ -0.59
Lmx1a-201ENSMUST00000028003 Cabp1Q9JLK7 227 aa11.33□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 GphnQ8BUV3 769 aaKnown RBP11.33□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Chrna2Q91X60 512 aa11.33□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Phlpp1Q8CHE4 1687 aa11.32□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Rimbp3Q3V0F0 1606 aa11.32□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Ncoa1P70365 1447 aa11.32□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Akap12Q9WTQ5 1684 aa11.31□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Anp32bQ9EST5 272 aaKnown RBP11.31□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Smg6P61406 1418 aaKnown RBP11.31□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Gm13697A2AK42 830 aa11.31□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Prex1Q69ZK0 1650 aa11.31□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Iqsec2Q5DU25 1478 aa11.3□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Robo2Q7TPD3 1470 aa11.3□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Tmem131lQ3U3D7 1597 aa11.29□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Scn4aQ9ER60 1841 aa11.29□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Vgll3P85442 326 aa11.29□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 4930567H17RikQ3V0K5 233 aa11.29□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 IbspQ61711 324 aa11.29□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 TimelessQ9R1X4 1197 aa11.29□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Mia2Q91ZV0 1396 aa11.28□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Chd2E9PZM4 1827 aaKnown RBP11.28□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Ylpm1Q9R0I7 1386 aaKnown RBP11.28□□□□□ -0.6
Lmx1a-201ENSMUST00000028003 Fhad1A6PWD2 1420 aa11.26□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Q8BT18 775 aa11.26□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Sart3Q9JLI8 962 aaKnown RBP11.26□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Lamc1P02468 1607 aaKnown RBP11.26□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Tecpr2Q3UH45 1423 aa11.26□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Nsd2Q8BVE8 1365 aa11.26□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Uggt1Q6P5E4 1551 aa11.26□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Pde4cQ3UEI1 686 aa11.25□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Fbxo41Q6NS60 873 aa11.25□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 AnkarA2RT91 1465 aa11.25□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Ythdc1E9Q5K9 736 aaKnown RBP11.25□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Kcnh8P59111 1102 aa11.25□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 PzpQ61838 1495 aa11.25□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Adgrb3Q80ZF8 1522 aa11.25□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Ltbp4Q8K4G1 1666 aa11.25□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Gemin5Q8BX17 1502 aaKnown RBP11.24□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Ino80Q6ZPV2 1559 aa11.24□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Zfp91Q62511 572 aa11.24□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Tarbp1E9Q368 1579 aa11.23□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Rims2Q9EQZ7 1530 aa11.23□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Asxl1P59598 1514 aa11.22□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 AlkP97793 1621 aa11.22□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Stard8Q8K031 1019 aa11.21□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Scaf11E9PZM7 1456 aaKnown RBP11.21□□□□□ -0.61
Lmx1a-201ENSMUST00000028003 Nup155Q99P88 1391 aaKnown RBP11.2□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Myom3A2ABU4 1439 aa11.2□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Mre11Q61216 706 aa11.2□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Ttc21bQ0HA38 1315 aa11.2□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Dnai1Q8C0M8 701 aa11.2□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Fam50aQ9WV03 339 aaKnown RBP11.19□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 PtprgQ05909 1442 aa11.19□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Wwc2Q6NXJ0 1187 aa11.19□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Ofd1Q80Z25 1017 aa11.19□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Chic2Q9D9G3 165 aa11.19□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Nrxn3Q6P9K9 1571 aa11.18□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Efcab6Q6P1E8 1516 aa11.18□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Skint5A7XUY5 1461 aa11.18□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Med1Q925J9 1575 aa11.17□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Mroh3A0A1D5RM54 893 aa11.17□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Itsn1Q9Z0R4 1714 aa11.17□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Spryd3E9Q9B3 442 aa11.17□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Map4P27546 1125 aaKnown RBP11.17□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Iqgap1Q9JKF1 1657 aaKnown RBP11.16□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Dusp27Q148W8 1138 aa11.16□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Phf14Q9D4H9 881 aa11.15□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Slc4a2P13808 1237 aaKnown RBP11.15□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Iqgap3F8VQ29 1632 aa11.15□□□□□ -0.62
Lmx1a-201ENSMUST00000028003 Gli3Q61602 1583 aa11.14□□□□□ -0.63
Lmx1a-201ENSMUST00000028003 Hspa5P20029 655 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms