RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 CenpbP27790 599 aa28.06■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Gm156Q58A37 223 aa28.06■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Col17a1Q07563 1470 aa28.06■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Cdk5rap2Q8K389 1822 aa28.05■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Dip2cE9PWR4 1557 aa28.05■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Ino80Q6ZPV2 1559 aa28.05■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Myom2Q14BI5 1463 aa28.04■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Erich6D3Z6S9 713 aa28.04■■■□□ 2.08
Cdx1-201ENSMUST00000025521 PrxO55103 1391 aa28.02■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Ptch1Q61115 1434 aa28.02■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Sall3Q62255 1320 aa28.01■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Sipa1l1Q8C0T5 1782 aa28.01■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Anp32bQ9EST5 272 aaKnown RBP27.99■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Srcin1Q9QWI6 1250 aa27.99■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Calr4Q3TQS0 420 aa27.99■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Stard8Q8K031 1019 aa27.99■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Myo3aQ8K3H5 1613 aa27.98■■■□□ 2.07
Cdx1-201ENSMUST00000025521 DnmbpQ6TXD4 1580 aa27.98■■■□□ 2.07
Cdx1-201ENSMUST00000025521 AatkQ80YE4 1365 aa27.97■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Adamts7Q68SA9 1657 aa27.97■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Talpid3E9PV87 1520 aa27.96■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Adgrl3Q80TS3 1537 aa27.96■■■□□ 2.07
Cdx1-201ENSMUST00000025521 SafbD3YXK2 937 aaKnown RBP27.94■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Plxnc1Q9QZC2 1574 aa27.93■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Nphp4P59240 1425 aa27.93■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Pank3Q8R2W9 370 aa27.93■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Gm16486A0A1D5RMD1 1434 aa27.93■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Tmf1B9EKI3 1091 aa27.92■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Uggt1Q6P5E4 1551 aa27.92■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Tex14Q7M6U3 1450 aa27.89■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Kdm2aP59997 1161 aa27.88■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Zscan10Q3URR7 782 aa27.88■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Stk24Q99KH8 431 aa27.87■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Kdm5aQ3UXZ9 1690 aa27.87■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Gm20521D3Z5F7 333 aa27.86■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Rpgrip1lQ8CG73 1264 aa27.86■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Ttc37F8VPK0 1563 aa27.85■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Zscan21Q07231 555 aa27.85■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Gm38655A0A286YDK6 273 aa27.84■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Ofd1Q80Z25 1017 aa27.84■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Inpp5dQ9ES52 1191 aa27.84■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Knl1Q66JQ7 1612 aa27.84■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Zbtb4Q5F293 982 aa27.83■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Mroh1E0CZ22 1640 aa27.83■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Hecw2Q6I6G8 1578 aa27.82■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Ift172Q6VH22 1749 aa27.82■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Srpk2O54781 681 aaKnown RBP27.82■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Gtf2e1Q9D0D5 440 aa27.81■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Synj2Q9D2G5 1434 aa27.8■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Ttbk1Q6PCN3 1308 aa27.79■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Fam184bQ0KK56 942 aa27.79■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Myom1Q62234 1667 aaKnown RBP27.78■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Os9Q8K2C7 672 aa27.77■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Cfap65Q3V0B4 1847 aa27.77■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Slc4a1apE9PX68 744 aa27.76■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Eif5bQ05D44 1216 aaKnown RBP27.76■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Usp40Q8BWR4 1235 aa27.76■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Yeats2Q3TUF7 1407 aa27.75■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Fan1Q69ZT1 1020 aa27.73■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Mak16Q8BGS0 296 aaKnown RBP27.73■■■□□ 2.03
Cdx1-201ENSMUST00000025521 MaddQ80U28 1577 aa27.71■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Rab3gap2Q8BMG7 1366 aa27.7■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Q7TT23 1179 aa27.7■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Anp32aO35381 247 aa27.69■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Atf7ipQ7TT18 1306 aa27.69■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Skint5A7XUY5 1461 aa27.69■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Puf60Q3UEB3 564 aaKnown RBP27.68■■■□□ 2.02
Cdx1-201ENSMUST00000025521 PalldQ9ET54 1408 aa27.68■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Slc52a2Q9D8F3 450 aa27.66■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Kank1E9Q238 1360 aa27.66■■■□□ 2.02
Cdx1-201ENSMUST00000025521 AU022751B1B0V2 589 aa27.65■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Lrrc7Q80TE7 1490 aa27.65■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Ppp2r1aQ76MZ3 589 aa27.65■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Ahdc1Q6PAL7 1594 aaKnown RBP27.64■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Eif2ak4Q9QZ05 1648 aa27.63■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Gprasp1Q5U4C1 1347 aa27.63■■■□□ 2.01
Cdx1-201ENSMUST00000025521 L3mbtl2P59178 703 aa27.6■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Rsph4aQ8BYM7 716 aa27.6■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Qser1A2BIE1 1698 aa27.58■■■□□ 2.01
Cdx1-201ENSMUST00000025521 P3h3Q8CG70 732 aa27.58■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Hfm1D3Z4R1 1434 aa27.58■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Zfp444Q3TDV8 331 aaKnown RBP27.58■■■□□ 2
Cdx1-201ENSMUST00000025521 InsrP15208 1372 aa27.58■■■□□ 2
Cdx1-201ENSMUST00000025521 Upf2A2AT37 1269 aaKnown RBP27.57■■■□□ 2
Cdx1-201ENSMUST00000025521 KdrP35918 1367 aa27.56■■■□□ 2
Cdx1-201ENSMUST00000025521 Kif7B7ZNG0 1348 aa27.52■■■□□ 2
Cdx1-201ENSMUST00000025521 Prrc2bQ7TPM1 1486 aaKnown RBP27.51■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Ppp1r18Q8BQ30 594 aa27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Ttc41Q692V3 1318 aa27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Kif13aQ9EQW7 1749 aa27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Arhgap23Q69ZH9 1483 aa27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Wdr43Q6ZQL4 677 aaKnown RBP27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 PtprmP28828 1452 aa27.49■■□□□ 1.99
Cdx1-201ENSMUST00000025521 CltcQ68FD5 1675 aaKnown RBP27.49■■□□□ 1.99
Cdx1-201ENSMUST00000025521 RictorQ6QI06 1708 aa27.49■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Mink1Q9JM52 1308 aa27.48■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Itsn1Q9Z0R4 1714 aa27.48■■□□□ 1.99
Cdx1-201ENSMUST00000025521 IqubQ8CDK3 788 aa27.48■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Erbb3Q61526 1339 aa27.47■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Stag3O70576 1240 aa27.46■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms