RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 AatkQ80YE4 1365 aa12.49□□□□□ -0.41
Cldn1-201ENSMUST00000023154 Adgrb3Q80ZF8 1522 aa12.48□□□□□ -0.41
Cldn1-201ENSMUST00000023154 Trpm1Q2TV84 1622 aa12.48□□□□□ -0.41
Cldn1-201ENSMUST00000023154 Myo3aQ8K3H5 1613 aa12.48□□□□□ -0.41
Cldn1-201ENSMUST00000023154 Hdac5Q9Z2V6 1113 aa12.47□□□□□ -0.41
Cldn1-201ENSMUST00000023154 Cep152A2AUM9 1736 aaKnown RBP12.46□□□□□ -0.41
Cldn1-201ENSMUST00000023154 PrxO55103 1391 aa12.46□□□□□ -0.41
Cldn1-201ENSMUST00000023154 Cdk5rap2Q8K389 1822 aa12.46□□□□□ -0.42
Cldn1-201ENSMUST00000023154 NrdcQ8BHG1 1161 aa12.45□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Pola1P33609 1465 aa12.45□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Ttc37F8VPK0 1563 aa12.45□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Rims1Q99NE5 1463 aa12.45□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Pank3Q8R2W9 370 aa12.45□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Ino80Q6ZPV2 1559 aa12.45□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Cfap65Q3V0B4 1847 aa12.45□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Srcin1Q9QWI6 1250 aa12.45□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Akap12Q9WTQ5 1684 aa12.44□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Ppp1r18Q8BQ30 594 aa12.44□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Os9Q8K2C7 672 aa12.43□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Gm20521D3Z5F7 333 aa12.43□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Eif5bQ05D44 1216 aaKnown RBP12.43□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Inpp5dQ9ES52 1191 aa12.43□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Fan1Q69ZT1 1020 aa12.43□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Efcab6Q6P1E8 1516 aa12.42□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Tecpr2Q3UH45 1423 aa12.42□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Rpgrip1lQ8CG73 1264 aa12.41□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Itsn2Q9Z0R6 1659 aa12.41□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Hecw2Q6I6G8 1578 aa12.4□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Knl1Q66JQ7 1612 aa12.4□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Myom2Q14BI5 1463 aa12.4□□□□□ -0.42
Cldn1-201ENSMUST00000023154 AU022751B1B0V2 589 aa12.4□□□□□ -0.42
Cldn1-201ENSMUST00000023154 Sipa1l1Q8C0T5 1782 aa12.4□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Srpk2O54781 681 aaKnown RBP12.39□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Slc4a1apE9PX68 744 aa12.39□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Usp40Q8BWR4 1235 aa12.39□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Q7TT23 1179 aa12.39□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Talpid3E9PV87 1520 aa12.39□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Sbno1Q689Z5 1390 aa12.38□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Zscan10Q3URR7 782 aa12.38□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Gm16486A0A1D5RMD1 1434 aa12.37□□□□□ -0.43
Cldn1-201ENSMUST00000023154 P3h3Q8CG70 732 aa12.37□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Synj2Q9D2G5 1434 aa12.37□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Adamts7Q68SA9 1657 aa12.37□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Mroh1E0CZ22 1640 aa12.36□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Nphp4P59240 1425 aa12.36□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Tmf1B9EKI3 1091 aa12.36□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Gtf2e1Q9D0D5 440 aa12.36□□□□□ -0.43
Cldn1-201ENSMUST00000023154 DnmbpQ6TXD4 1580 aa12.36□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Myom1Q62234 1667 aaKnown RBP12.36□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Puf60Q3UEB3 564 aaKnown RBP12.35□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Plxnc1Q9QZC2 1574 aa12.35□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Calr4Q3TQS0 420 aa12.34□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Qser1A2BIE1 1698 aa12.34□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Skint5A7XUY5 1461 aa12.34□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Fam184bQ0KK56 942 aa12.33□□□□□ -0.43
Cldn1-201ENSMUST00000023154 Ttbk1Q6PCN3 1308 aa12.33□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Uggt1Q6P5E4 1551 aa12.33□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Ofd1Q80Z25 1017 aa12.33□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Ahdc1Q6PAL7 1594 aaKnown RBP12.32□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Kdm5aQ3UXZ9 1690 aa12.31□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Afap1Q80YS6 731 aa12.31□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Lrrc7Q80TE7 1490 aa12.31□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Ift172Q6VH22 1749 aa12.31□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Fam71e1A1L3C1 212 aa12.31□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Tex14Q7M6U3 1450 aa12.31□□□□□ -0.44
Cldn1-201ENSMUST00000023154 PtprmP28828 1452 aa12.3□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Zscan21Q07231 555 aa12.3□□□□□ -0.44
Cldn1-201ENSMUST00000023154 CltcQ68FD5 1675 aaKnown RBP12.3□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Kif13aQ9EQW7 1749 aa12.29□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Prrc2bQ7TPM1 1486 aaKnown RBP12.29□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Hfm1D3Z4R1 1434 aa12.29□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Stard8Q8K031 1019 aa12.29□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Cnga1P29974 684 aa12.28□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Ppp2r1aQ76MZ3 589 aa12.28□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Anp32bQ9EST5 272 aaKnown RBP12.28□□□□□ -0.44
Cldn1-201ENSMUST00000023154 PalldQ9ET54 1408 aa12.28□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Zmym4A2A791 1549 aaKnown RBP12.28□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Dnajc5gQ8C632 165 aa12.28□□□□□ -0.44
Cldn1-201ENSMUST00000023154 L3mbtl2P59178 703 aa12.27□□□□□ -0.44
Cldn1-201ENSMUST00000023154 Stag3O70576 1240 aa12.27□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Prdm10Q3UTQ7 1184 aa12.26□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Itsn1Q9Z0R4 1714 aa12.26□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Arhgap23Q69ZH9 1483 aa12.26□□□□□ -0.45
Cldn1-201ENSMUST00000023154 NpatQ8BMA5 1420 aa12.26□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Kif7B7ZNG0 1348 aa12.25□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Rab3gap2Q8BMG7 1366 aa12.25□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Zfp444Q3TDV8 331 aaKnown RBP12.25□□□□□ -0.45
Cldn1-201ENSMUST00000023154 MaddQ80U28 1577 aa12.24□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Dcaf11Q91VU6 549 aa12.24□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Stk26Q99JT2 416 aa12.24□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Mak16Q8BGS0 296 aaKnown RBP12.24□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Esx1O88933 382 aa12.23□□□□□ -0.45
Cldn1-201ENSMUST00000023154 RictorQ6QI06 1708 aa12.23□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Cep170bQ80U49 1574 aa12.23□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Slc52a2Q9D8F3 450 aa12.23□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Anp32aO35381 247 aa12.23□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Atp1b4Q99ME6 356 aa12.23□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Erbb3Q61526 1339 aa12.23□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Shq1Q7TMX5 569 aa12.22□□□□□ -0.45
Cldn1-201ENSMUST00000023154 Ercc6l2Q9JIM3 1537 aa12.22□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms