RNA–Protein interactions for RNA: ENSMUST00000022330.8

Ldb3-203, Transcript of LIM domain-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ldb3, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-203ENSMUST00000022330 Rims1Q99NE5 1463 aa17.12■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Hfm1D3Z4R1 1434 aa17.11■□□□□ 0.33
Ldb3-203ENSMUST00000022330 AatkQ80YE4 1365 aa17.11■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Stk24Q99KH8 431 aa17.11■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Arhgap23Q69ZH9 1483 aa17.1■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Plxnc1Q9QZC2 1574 aa17.1■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Adamtsl3G3UXC7 1706 aa17.09■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Rock2P70336 1388 aa17.09■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Setd1aE9PYH6 1716 aa17.09■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Mroh1E0CZ22 1640 aa17.09■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Ahdc1Q6PAL7 1594 aaKnown RBP17.08■□□□□ 0.33
Ldb3-203ENSMUST00000022330 Skint5A7XUY5 1461 aa17.08■□□□□ 0.32
Ldb3-203ENSMUST00000022330 Afap1Q80YS6 731 aa17.07■□□□□ 0.32
Ldb3-203ENSMUST00000022330 Myo3aQ8K3H5 1613 aa17.04■□□□□ 0.32
Ldb3-203ENSMUST00000022330 Cdk5rap2Q8K389 1822 aa17.03■□□□□ 0.32
Ldb3-203ENSMUST00000022330 Dnajc5gQ8C632 165 aa17.02■□□□□ 0.32
Ldb3-203ENSMUST00000022330 Myom1Q62234 1667 aaKnown RBP17.02■□□□□ 0.32
Ldb3-203ENSMUST00000022330 Plekhg5Q66T02 1073 aa17.01■□□□□ 0.31
Ldb3-203ENSMUST00000022330 Mapk8ip2Q9ERE9 830 aa17■□□□□ 0.31
Ldb3-203ENSMUST00000022330 Kif13aQ9EQW7 1749 aa16.99■□□□□ 0.31
Ldb3-203ENSMUST00000022330 Pola1P33609 1465 aa16.99■□□□□ 0.31
Ldb3-203ENSMUST00000022330 Itsn1Q9Z0R4 1714 aa16.99■□□□□ 0.31
Ldb3-203ENSMUST00000022330 Sipa1l1Q8C0T5 1782 aa16.98■□□□□ 0.31
Ldb3-203ENSMUST00000022330 Med14A2ABV5 1459 aaKnown RBP16.97■□□□□ 0.31
Ldb3-203ENSMUST00000022330 Srpk2O54781 681 aaKnown RBP16.97■□□□□ 0.31
Ldb3-203ENSMUST00000022330 Kdm2aP59997 1161 aa16.97■□□□□ 0.31
Ldb3-203ENSMUST00000022330 DnmbpQ6TXD4 1580 aa16.96■□□□□ 0.31
Ldb3-203ENSMUST00000022330 Itsn2Q9Z0R6 1659 aa16.96■□□□□ 0.31
Ldb3-203ENSMUST00000022330 PtprmP28828 1452 aa16.96■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Prrc2bQ7TPM1 1486 aaKnown RBP16.96■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Alpk3Q924C5 1678 aa16.95■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Gm20521D3Z5F7 333 aa16.95■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Os9Q8K2C7 672 aa16.95■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Kdm5aQ3UXZ9 1690 aa16.95■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Stard8Q8K031 1019 aa16.94■□□□□ 0.3
Ldb3-203ENSMUST00000022330 AU022751B1B0V2 589 aa16.94■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Nphp4P59240 1425 aa16.93■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Smg6P61406 1418 aaKnown RBP16.93■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Nop58Q6DFW4 536 aaKnown RBP16.93■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Plppr3Q7TPB0 716 aa16.93■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Naip7Q9JIB3 1402 aa16.93■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Srcin1Q9QWI6 1250 aa16.92■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Ercc6l2Q9JIM3 1537 aa16.91■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Slc52a2Q9D8F3 450 aa16.91■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Tubgcp6G5E8P0 1769 aa16.91■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Zc3h13E9Q784 1729 aaKnown RBP16.91■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Fan1Q69ZT1 1020 aa16.9■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Ift172Q6VH22 1749 aa16.9■□□□□ 0.3
Ldb3-203ENSMUST00000022330 Lrrc7Q80TE7 1490 aa16.89■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Safb2Q80YR5 991 aaKnown RBP16.88■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Arhgef28P97433 1693 aa16.88■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Eif2ak4Q9QZ05 1648 aa16.88■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Chd2E9PZM4 1827 aaKnown RBP16.87■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Puf60Q3UEB3 564 aaKnown RBP16.87■□□□□ 0.29
Ldb3-203ENSMUST00000022330 PalldQ9ET54 1408 aa16.87■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Dip2bQ3UH60 1574 aa16.87■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Gtf2e1Q9D0D5 440 aa16.86■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Sbno1Q689Z5 1390 aa16.86■□□□□ 0.29
Ldb3-203ENSMUST00000022330 MaddQ80U28 1577 aa16.86■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Usp40Q8BWR4 1235 aa16.85■□□□□ 0.29
Ldb3-203ENSMUST00000022330 PplQ9R269 1755 aa16.85■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Zbtb4Q5F293 982 aa16.85■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Gemin5Q8BX17 1502 aaKnown RBP16.85■□□□□ 0.29
Ldb3-203ENSMUST00000022330 Gm13695A2AK44 830 aa16.83■□□□□ 0.28
Ldb3-203ENSMUST00000022330 Arid4bA2CG63 1314 aaKnown RBP16.82■□□□□ 0.28
Ldb3-203ENSMUST00000022330 Dip2aQ8BWT5 1523 aa16.79■□□□□ 0.28
Ldb3-203ENSMUST00000022330 Slc24a1Q91WD8 1130 aa16.79■□□□□ 0.28
Ldb3-203ENSMUST00000022330 Shq1Q7TMX5 569 aa16.77■□□□□ 0.28
Ldb3-203ENSMUST00000022330 IqubQ8CDK3 788 aa16.77■□□□□ 0.28
Ldb3-203ENSMUST00000022330 PrxO55103 1391 aa16.77■□□□□ 0.28
Ldb3-203ENSMUST00000022330 Atp1b4Q99ME6 356 aa16.77■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Bcl9Q9D219 1425 aa16.75■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Stag3O70576 1240 aa16.74■□□□□ 0.27
Ldb3-203ENSMUST00000022330 4930407I10RikD3Z5T8 1512 aa16.74■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Tmf1B9EKI3 1091 aa16.73■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Gm16486A0A1D5RMD1 1434 aa16.73■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Plekhg1F6S200 1446 aa16.73■□□□□ 0.27
Ldb3-203ENSMUST00000022330 P3h3Q8CG70 732 aa16.72■□□□□ 0.27
Ldb3-203ENSMUST00000022330 InsrP15208 1372 aa16.72■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Pank3Q8R2W9 370 aa16.72■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Q9D9H8 365 aa16.72■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Slit3Q9WVB4 1523 aa16.71■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Stra8P70278 393 aa16.71■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Txndc2Q6P902 515 aa16.71■□□□□ 0.27
Ldb3-203ENSMUST00000022330 Cep170bQ80U49 1574 aa16.7■□□□□ 0.26
Ldb3-203ENSMUST00000022330 CenpjQ569L8 1344 aa16.7■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Slc4a1apE9PX68 744 aa16.69■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Psme1P97371 249 aa16.69■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Fam184bQ0KK56 942 aa16.68■□□□□ 0.26
Ldb3-203ENSMUST00000022330 MlecQ6ZQI3 291 aaKnown RBP16.68■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Exoc6Q8R313 802 aa16.68■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Zscan10Q3URR7 782 aa16.68■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Lmtk3Q5XJV6 1424 aa16.67■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Abca14E9Q8F8 1683 aa16.67■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Stk26Q99JT2 416 aa16.67■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Inpp5dQ9ES52 1191 aa16.67■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Topaz1E5FYH1 1653 aa16.66■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Mrs2Q5NCE8 434 aa16.65■□□□□ 0.26
Ldb3-203ENSMUST00000022330 PzpQ61838 1495 aa16.65■□□□□ 0.26
Ldb3-203ENSMUST00000022330 Nwd1A6H603 1563 aa16.65■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 84.9 ms