RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Kdm2bQ6P1G2 1309 aa13.28□□□□□ -0.28
Clip3-201ENSMUST00000014065 Mapk8ip3Q9ESN9 1337 aa13.28□□□□□ -0.28
Clip3-201ENSMUST00000014065 Cluap1Q8R3P7 413 aa13.28□□□□□ -0.28
Clip3-201ENSMUST00000014065 Ssh2Q5SW75 1423 aa13.28□□□□□ -0.28
Clip3-201ENSMUST00000014065 Rab3gap2Q8BMG7 1366 aa13.28□□□□□ -0.28
Clip3-201ENSMUST00000014065 Mink1Q9JM52 1308 aa13.28□□□□□ -0.28
Clip3-201ENSMUST00000014065 Smc5Q8CG46 1101 aaKnown RBP13.28□□□□□ -0.28
Clip3-201ENSMUST00000014065 Map3k5O35099 1380 aa13.27□□□□□ -0.28
Clip3-201ENSMUST00000014065 Gas2l2Q5SSG4 860 aa13.27□□□□□ -0.28
Clip3-201ENSMUST00000014065 Gtf2e1Q9D0D5 440 aa13.27□□□□□ -0.28
Clip3-201ENSMUST00000014065 KarsQ99MN1 595 aaKnown RBP13.27□□□□□ -0.29
Clip3-201ENSMUST00000014065 Ccdc183A2AJB1 534 aa13.26□□□□□ -0.29
Clip3-201ENSMUST00000014065 Kif21bQ9QXL1 1668 aa13.26□□□□□ -0.29
Clip3-201ENSMUST00000014065 DroshaQ5HZJ0 1373 aaKnown RBP13.25□□□□□ -0.29
Clip3-201ENSMUST00000014065 Mlh3A0A1Y7VMP7 1443 aa13.25□□□□□ -0.29
Clip3-201ENSMUST00000014065 Trappc8E9PWG2 1437 aa13.25□□□□□ -0.29
Clip3-201ENSMUST00000014065 TnikP83510 1323 aa13.25□□□□□ -0.29
Clip3-201ENSMUST00000014065 Atxn3Q9CVD2 355 aa13.24□□□□□ -0.29
Clip3-201ENSMUST00000014065 Kiaa1551Q5DTW7 1521 aa13.24□□□□□ -0.29
Clip3-201ENSMUST00000014065 Arhgap5P97393 1501 aa13.23□□□□□ -0.29
Clip3-201ENSMUST00000014065 Usp40Q8BWR4 1235 aa13.23□□□□□ -0.29
Clip3-201ENSMUST00000014065 Dot1lQ6XZL8 1540 aa13.23□□□□□ -0.29
Clip3-201ENSMUST00000014065 Ksr2Q3UVC0 959 aa13.22□□□□□ -0.29
Clip3-201ENSMUST00000014065 Kif3bQ61771 747 aa13.22□□□□□ -0.29
Clip3-201ENSMUST00000014065 PtprgQ05909 1442 aa13.22□□□□□ -0.29
Clip3-201ENSMUST00000014065 Neo1P97798 1493 aa13.22□□□□□ -0.29
Clip3-201ENSMUST00000014065 Htatsf1Q8BGC0 757 aa13.21□□□□□ -0.29
Clip3-201ENSMUST00000014065 Kdm5cP41230 1554 aa13.21□□□□□ -0.29
Clip3-201ENSMUST00000014065 Dnttip2Q8R2M2 758 aaKnown RBP13.21□□□□□ -0.29
Clip3-201ENSMUST00000014065 Znf330Q922H9 316 aa13.21□□□□□ -0.29
Clip3-201ENSMUST00000014065 Rusc2Q80U22 1514 aa13.21□□□□□ -0.3
Clip3-201ENSMUST00000014065 Senp3Q9EP97 568 aaKnown RBP13.2□□□□□ -0.3
Clip3-201ENSMUST00000014065 Dnmt1P13864 1620 aaKnown RBP13.2□□□□□ -0.3
Clip3-201ENSMUST00000014065 Mapkbp1Q6NS57 1503 aa13.2□□□□□ -0.3
Clip3-201ENSMUST00000014065 Caskin1Q6P9K8 1431 aa13.2□□□□□ -0.3
Clip3-201ENSMUST00000014065 Mfap1aC0HKD8 439 aaKnown RBP13.19□□□□□ -0.3
Clip3-201ENSMUST00000014065 Mfap1bC0HKD9 439 aaKnown RBP13.19□□□□□ -0.3
Clip3-201ENSMUST00000014065 Eif4g3Q80XI3 1579 aaKnown RBP13.19□□□□□ -0.3
Clip3-201ENSMUST00000014065 Mroh2aD3Z750 1679 aa13.19□□□□□ -0.3
Clip3-201ENSMUST00000014065 Apaf1O88879 1249 aa13.19□□□□□ -0.3
Clip3-201ENSMUST00000014065 Ipo4Q8VI75 1082 aa13.18□□□□□ -0.3
Clip3-201ENSMUST00000014065 Atp1b4Q99ME6 356 aa13.18□□□□□ -0.3
Clip3-201ENSMUST00000014065 Vsig10D3YX43 558 aa13.18□□□□□ -0.3
Clip3-201ENSMUST00000014065 Fgd1P52734 960 aa13.18□□□□□ -0.3
Clip3-201ENSMUST00000014065 U2af1Q9D883 239 aaKnown RBP13.18□□□□□ -0.3
Clip3-201ENSMUST00000014065 Tex14Q7M6U3 1450 aa13.18□□□□□ -0.3
Clip3-201ENSMUST00000014065 Stag3O70576 1240 aa13.18□□□□□ -0.3
Clip3-201ENSMUST00000014065 Tnpo1Q8BFY9 898 aaKnown RBP13.18□□□□□ -0.3
Clip3-201ENSMUST00000014065 Trpm2Q91YD4 1506 aa13.17□□□□□ -0.3
Clip3-201ENSMUST00000014065 Tarbp1E9Q368 1579 aa13.17□□□□□ -0.3
Clip3-201ENSMUST00000014065 Lrrc9Q8CDN9 1456 aa13.17□□□□□ -0.3
Clip3-201ENSMUST00000014065 Trim58Q5NCC9 485 aa13.16□□□□□ -0.3
Clip3-201ENSMUST00000014065 Ralbp1Q62172 648 aa13.16□□□□□ -0.3
Clip3-201ENSMUST00000014065 Ppp1r9bQ6R891 817 aaKnown RBP13.16□□□□□ -0.3
Clip3-201ENSMUST00000014065 Rlbp1Q9Z275 317 aa13.15□□□□□ -0.3
Clip3-201ENSMUST00000014065 Plcb2A3KGF7 1181 aa13.15□□□□□ -0.31
Clip3-201ENSMUST00000014065 Znf692Q3U381 531 aa13.14□□□□□ -0.31
Clip3-201ENSMUST00000014065 Duxf3A0A0N4SV92 674 aa13.14□□□□□ -0.31
Clip3-201ENSMUST00000014065 GsdmaQ9EST1 446 aa13.14□□□□□ -0.31
Clip3-201ENSMUST00000014065 DekQ7TNV0 380 aaKnown RBP13.13□□□□□ -0.31
Clip3-201ENSMUST00000014065 Plch2A2AP18 1501 aa13.13□□□□□ -0.31
Clip3-201ENSMUST00000014065 Gm16486A0A1D5RMD1 1434 aa13.13□□□□□ -0.31
Clip3-201ENSMUST00000014065 AU015836B2RUM3 263 aa13.13□□□□□ -0.31
Clip3-201ENSMUST00000014065 Pnmal2G3X9N3 661 aa13.12□□□□□ -0.31
Clip3-201ENSMUST00000014065 Arid3cA6PWV5 409 aa13.12□□□□□ -0.31
Clip3-201ENSMUST00000014065 Iqgap1Q9JKF1 1657 aaKnown RBP13.11□□□□□ -0.31
Clip3-201ENSMUST00000014065 Ppp2r3aB2RXC8 1150 aa13.11□□□□□ -0.31
Clip3-201ENSMUST00000014065 Uspl1Q3ULM6 1089 aa13.11□□□□□ -0.31
Clip3-201ENSMUST00000014065 Tsen2Q6P7W5 460 aa13.11□□□□□ -0.31
Clip3-201ENSMUST00000014065 Rrbp1Q99PL5 1605 aaKnown RBP13.11□□□□□ -0.31
Clip3-201ENSMUST00000014065 Fmn2Q9JL04 1578 aa13.11□□□□□ -0.31
Clip3-201ENSMUST00000014065 Usp19Q3UJD6 1360 aa13.1□□□□□ -0.31
Clip3-201ENSMUST00000014065 Nutm1Q8BHP2 1126 aa13.1□□□□□ -0.31
Clip3-201ENSMUST00000014065 Stk26Q99JT2 416 aa13.1□□□□□ -0.31
Clip3-201ENSMUST00000014065 Fancd2Q80V62 1450 aa13.1□□□□□ -0.31
Clip3-201ENSMUST00000014065 Sptbn5F6UCX4 1208 aa13.1□□□□□ -0.31
Clip3-201ENSMUST00000014065 Exosc9Q9JHI7 438 aaKnown RBP13.1□□□□□ -0.31
Clip3-201ENSMUST00000014065 Gapvd1Q6PAR5 1458 aa13.09□□□□□ -0.31
Clip3-201ENSMUST00000014065 Adgrl2Q8JZZ7 1487 aa13.09□□□□□ -0.31
Clip3-201ENSMUST00000014065 Atf7ipQ7TT18 1306 aa13.09□□□□□ -0.31
Clip3-201ENSMUST00000014065 Prdm16A2A935 1275 aa13.09□□□□□ -0.31
Clip3-201ENSMUST00000014065 Ppp1r3fQ9JIG4 799 aa13.09□□□□□ -0.31
Clip3-201ENSMUST00000014065 Edc4Q3UJB9 1406 aaKnown RBP13.08□□□□□ -0.32
Clip3-201ENSMUST00000014065 Nsd2Q8BVE8 1365 aa13.08□□□□□ -0.32
Clip3-201ENSMUST00000014065 Ylpm1Q9R0I7 1386 aaKnown RBP13.08□□□□□ -0.32
Clip3-201ENSMUST00000014065 Rfx1P48377 963 aa13.08□□□□□ -0.32
Clip3-201ENSMUST00000014065 Tmco5bQ80X59 307 aa13.08□□□□□ -0.32
Clip3-201ENSMUST00000014065 Puf60Q3UEB3 564 aaKnown RBP13.08□□□□□ -0.32
Clip3-201ENSMUST00000014065 Ttc41Q692V3 1318 aa13.07□□□□□ -0.32
Clip3-201ENSMUST00000014065 Rabep1O35551 862 aa13.07□□□□□ -0.32
Clip3-201ENSMUST00000014065 Pknox2Q8BG99 474 aa13.07□□□□□ -0.32
Clip3-201ENSMUST00000014065 Fam208aQ69ZR9 1610 aaKnown RBP13.07□□□□□ -0.32
Clip3-201ENSMUST00000014065 Sbno1Q689Z5 1390 aa13.06□□□□□ -0.32
Clip3-201ENSMUST00000014065 Ccar1Q8CH18 1146 aaKnown RBP13.06□□□□□ -0.32
Clip3-201ENSMUST00000014065 GorabQ8BRM2 368 aa13.06□□□□□ -0.32
Clip3-201ENSMUST00000014065 ErbinQ80TH2 1402 aa13.05□□□□□ -0.32
Clip3-201ENSMUST00000014065 Kiaa1107Q80TK0 1369 aa13.05□□□□□ -0.32
Clip3-201ENSMUST00000014065 IqubQ8CDK3 788 aa13.05□□□□□ -0.32
Clip3-201ENSMUST00000014065 Nectin2P32507 530 aa13.05□□□□□ -0.32
Clip3-201ENSMUST00000014065 Zranb1Q7M760 708 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms