RNA–Protein interactions for RNA: ENSMUST00000006476.5

Upk1a-201, Transcript of Uroplakin-1a, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk1a, Length 1,421 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1a-201ENSMUST00000006476 Ercc6l2Q9JIM3 1537 aa20.95■□□□□ 0.94
Upk1a-201ENSMUST00000006476 Kif13aQ9EQW7 1749 aa20.95■□□□□ 0.94
Upk1a-201ENSMUST00000006476 Plxnc1Q9QZC2 1574 aa20.95■□□□□ 0.94
Upk1a-201ENSMUST00000006476 Rims1Q99NE5 1463 aa20.94■□□□□ 0.94
Upk1a-201ENSMUST00000006476 Chd2E9PZM4 1827 aaKnown RBP20.93■□□□□ 0.94
Upk1a-201ENSMUST00000006476 4930407I10RikD3Z5T8 1512 aa20.93■□□□□ 0.94
Upk1a-201ENSMUST00000006476 Cep152A2AUM9 1736 aaKnown RBP20.92■□□□□ 0.94
Upk1a-201ENSMUST00000006476 Mug2P28666 1451 aa20.91■□□□□ 0.94
Upk1a-201ENSMUST00000006476 Naip7Q9JIB3 1402 aa20.91■□□□□ 0.94
Upk1a-201ENSMUST00000006476 MyclP10166 368 aa20.89■□□□□ 0.94
Upk1a-201ENSMUST00000006476 PtprmP28828 1452 aa20.89■□□□□ 0.93
Upk1a-201ENSMUST00000006476 Prrc2bQ7TPM1 1486 aaKnown RBP20.89■□□□□ 0.93
Upk1a-201ENSMUST00000006476 Neurod1Q60867 357 aa20.88■□□□□ 0.93
Upk1a-201ENSMUST00000006476 Gemin5Q8BX17 1502 aaKnown RBP20.88■□□□□ 0.93
Upk1a-201ENSMUST00000006476 Ifit1bl1D3Z6F0 470 aa20.87■□□□□ 0.93
Upk1a-201ENSMUST00000006476 Zc3h13E9Q784 1729 aaKnown RBP20.86■□□□□ 0.93
Upk1a-201ENSMUST00000006476 Grwd1Q810D6 446 aaKnown RBP20.86■□□□□ 0.93
Upk1a-201ENSMUST00000006476 Myom1Q62234 1667 aaKnown RBP20.85■□□□□ 0.93
Upk1a-201ENSMUST00000006476 Dapk1Q80YE7 1442 aa20.84■□□□□ 0.93
Upk1a-201ENSMUST00000006476 RalgapbQ8BQZ4 1484 aa20.83■□□□□ 0.92
Upk1a-201ENSMUST00000006476 Topaz1E5FYH1 1653 aa20.83■□□□□ 0.92
Upk1a-201ENSMUST00000006476 PplQ9R269 1755 aa20.82■□□□□ 0.92
Upk1a-201ENSMUST00000006476 GphnQ8BUV3 769 aaKnown RBP20.8■□□□□ 0.92
Upk1a-201ENSMUST00000006476 Eif2ak4Q9QZ05 1648 aa20.8■□□□□ 0.92
Upk1a-201ENSMUST00000006476 Brwd3A2AHJ4 1799 aa20.8■□□□□ 0.92
Upk1a-201ENSMUST00000006476 AU022751B1B0V2 589 aa20.79■□□□□ 0.92
Upk1a-201ENSMUST00000006476 Lmtk3Q5XJV6 1424 aa20.79■□□□□ 0.92
Upk1a-201ENSMUST00000006476 Myo3aQ8K3H5 1613 aa20.79■□□□□ 0.92
Upk1a-201ENSMUST00000006476 Slc52a2Q9D8F3 450 aa20.78■□□□□ 0.92
Upk1a-201ENSMUST00000006476 Srpk2O54781 681 aaKnown RBP20.75■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Cdk5rap2Q8K389 1822 aa20.75■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Rundc1Q0VDN7 615 aa20.74■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Ppargc1bQ8VHJ7 1014 aa20.74■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Arhgef28P97433 1693 aa20.74■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Card11Q8CIS0 1159 aa20.73■□□□□ 0.91
Upk1a-201ENSMUST00000006476 MaddQ80U28 1577 aa20.73■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Kdm2aP59997 1161 aa20.72■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Txndc2Q6P902 515 aa20.72■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Setd1aE9PYH6 1716 aa20.72■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Dip2aQ8BWT5 1523 aa20.71■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Gm20521D3Z5F7 333 aa20.71■□□□□ 0.91
Upk1a-201ENSMUST00000006476 Stard8Q8K031 1019 aa20.71■□□□□ 0.91
Upk1a-201ENSMUST00000006476 PalldQ9ET54 1408 aa20.7■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Cwc22Q8C5N3 908 aaKnown RBP20.7■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Os9Q8K2C7 672 aa20.7■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Sipa1l1Q8C0T5 1782 aa20.69■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Psme1P97371 249 aa20.68■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Rimbp3Q3V0F0 1606 aa20.67■□□□□ 0.9
Upk1a-201ENSMUST00000006476 DnmbpQ6TXD4 1580 aa20.67■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Slit3Q9WVB4 1523 aa20.66■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Fan1Q69ZT1 1020 aa20.66■□□□□ 0.9
Upk1a-201ENSMUST00000006476 P3h3Q8CG70 732 aa20.66■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Aebp2Q9Z248 504 aaKnown RBP20.66■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Nphp4P59240 1425 aa20.65■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Puf60Q3UEB3 564 aaKnown RBP20.65■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Lrrc7Q80TE7 1490 aa20.64■□□□□ 0.9
Upk1a-201ENSMUST00000006476 Shq1Q7TMX5 569 aa20.64■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Rock2P70336 1388 aa20.63■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Atp1b4Q99ME6 356 aa20.62■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Phlpp1Q8CHE4 1687 aa20.62■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Gm13695A2AK44 830 aa20.61■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Arid4bA2CG63 1314 aaKnown RBP20.61■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Rims2Q9EQZ7 1530 aa20.61■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Wdr66E9Q743 1299 aa20.61■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Scaf11E9PZM7 1456 aaKnown RBP20.6■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Pik3r4Q8VD65 1358 aa20.6■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Ift172Q6VH22 1749 aa20.6■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Srcin1Q9QWI6 1250 aa20.6■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Pola1P33609 1465 aa20.6■□□□□ 0.89
Upk1a-201ENSMUST00000006476 PzpQ61838 1495 aa20.6■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Ncoa1P70365 1447 aa20.59■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Q9D9H8 365 aa20.59■□□□□ 0.89
Upk1a-201ENSMUST00000006476 Usp40Q8BWR4 1235 aa20.58■□□□□ 0.88
Upk1a-201ENSMUST00000006476 Plekhg1F6S200 1446 aa20.57■□□□□ 0.88
Upk1a-201ENSMUST00000006476 Arap3Q8R5G7 1538 aa20.57■□□□□ 0.88
Upk1a-201ENSMUST00000006476 IqubQ8CDK3 788 aa20.56■□□□□ 0.88
Upk1a-201ENSMUST00000006476 Gtf2e1Q9D0D5 440 aa20.56■□□□□ 0.88
Upk1a-201ENSMUST00000006476 ClspnQ80YR7 1315 aa20.56■□□□□ 0.88
Upk1a-201ENSMUST00000006476 Sin3aQ60520 1274 aaKnown RBP20.53■□□□□ 0.88
Upk1a-201ENSMUST00000006476 Itsn2Q9Z0R6 1659 aa20.53■□□□□ 0.88
Upk1a-201ENSMUST00000006476 Med1Q925J9 1575 aa20.53■□□□□ 0.88
Upk1a-201ENSMUST00000006476 Cps1Q8C196 1500 aa20.51■□□□□ 0.87
Upk1a-201ENSMUST00000006476 IghaA0A0A6YXW6 389 aa20.51■□□□□ 0.87
Upk1a-201ENSMUST00000006476 Gm16486A0A1D5RMD1 1434 aa20.49■□□□□ 0.87
Upk1a-201ENSMUST00000006476 Asxl2Q8BZ32 1370 aa20.48■□□□□ 0.87
Upk1a-201ENSMUST00000006476 Scn4aQ9ER60 1841 aa20.48■□□□□ 0.87
Upk1a-201ENSMUST00000006476 Nrxn3Q6P9K9 1571 aa20.48■□□□□ 0.87
Upk1a-201ENSMUST00000006476 Stag3O70576 1240 aa20.48■□□□□ 0.87
Upk1a-201ENSMUST00000006476 Utp14aQ640M1 767 aaKnown RBP20.48■□□□□ 0.87
Upk1a-201ENSMUST00000006476 Plekhg5Q66T02 1073 aa20.46■□□□□ 0.87
Upk1a-201ENSMUST00000006476 Cep170bQ80U49 1574 aa20.45■□□□□ 0.86
Upk1a-201ENSMUST00000006476 Stk26Q99JT2 416 aa20.45■□□□□ 0.86
Upk1a-201ENSMUST00000006476 CenpjQ569L8 1344 aa20.42■□□□□ 0.86
Upk1a-201ENSMUST00000006476 Cyb5rlB1AS42 316 aa20.42■□□□□ 0.86
Upk1a-201ENSMUST00000006476 Thsd7aQ69ZU6 1645 aa20.41■□□□□ 0.86
Upk1a-201ENSMUST00000006476 Nwd1A6H603 1563 aa20.4■□□□□ 0.86
Upk1a-201ENSMUST00000006476 Sbno1Q689Z5 1390 aa20.4■□□□□ 0.86
Upk1a-201ENSMUST00000006476 InsrP15208 1372 aa20.39■□□□□ 0.86
Upk1a-201ENSMUST00000006476 Abca14E9Q8F8 1683 aa20.39■□□□□ 0.85
Upk1a-201ENSMUST00000006476 Ltbp4Q8K4G1 1666 aa20.37■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms