RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Kif16bB1AVY7 1312 aa11.25□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Ubap1lG3UW59 384 aa11.25□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Rfx1P48377 963 aa11.25□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 BccipQ9CWI3 316 aa11.25□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Krt82Q99M74 516 aa11.25□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Ankrd36D3Z4K0 1415 aa11.24□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Ciz1Q8VEH2 845 aa11.24□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Usp16Q99LG0 825 aa11.24□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Ak7Q9D2H2 614 aa11.24□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Nsd2Q8BVE8 1365 aa11.24□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Gabpb2P81069 414 aa11.24□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Ppm1fQ8CGA0 452 aa11.24□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 A0A1L1SQF0 893 aa11.23□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Dhx16G3X8X0 1044 aaKnown RBP11.23□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Utp3Q9JI13 469 aaKnown RBP11.23□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Fyb1O35601 819 aa11.23□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Rnf20Q5DTM8 973 aa11.23□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Ric3Q8BPM6 367 aa11.23□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Gsdma3Q5Y4Y6 464 aa11.23□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Noc3lQ8VI84 807 aaKnown RBP11.23□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Gnai1B2RSH2 354 aa11.22□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Gnai3Q9DC51 354 aa11.22□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Gsto1O09131 240 aa11.22□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Rec8Q8C5S7 591 aa11.22□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Shroom4Q1W617 1475 aa11.22□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Rabep1O35551 862 aa11.21□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Kif4P33174 1231 aa11.21□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Jph4Q80WT0 628 aa11.21□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Pabpn1Q8CCS6 302 aaKnown RBP11.21□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 PhaxQ9JJT9 385 aaKnown RBP11.21□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Odf2A3KGV1 830 aaKnown RBP11.21□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Bicd2Q921C5 820 aa11.21□□□□□ -0.61
Pdgfra-201ENSMUST00000000476 Phactr2B1AVP0 632 aa11.21□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Ipo7Q9EPL8 1038 aaKnown RBP11.21□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Ccdc30Q8BVF4 654 aa11.21□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Polr1aO35134 1717 aaKnown RBP11.2□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Cplx1P63040 134 aa11.2□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Polr3gQ6NXY9 223 aa11.2□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Ttll5Q8CHB8 1328 aa11.2□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Hmox1P14901 289 aa11.2□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Ftsj3Q9DBE9 838 aaKnown RBP11.2□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Neurod6P48986 337 aa11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Drc7Q6V3W6 876 aa11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Smc3Q9CW03 1217 aaKnown RBP11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Swt1Q9DBQ9 907 aa11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Erc2Q6PH08 957 aa11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Rbm25B2RY56 838 aaKnown RBP11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Gripap1Q8VD04 806 aa11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Rpgrip1lQ8CG73 1264 aa11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Gtf3c3Q3TMP1 882 aa11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Gprasp1Q5U4C1 1347 aa11.19□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Q8C5K5 320 aa11.18□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Atl3Q91YH5 541 aa11.18□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Map7d2A2AG50 781 aa11.18□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Q9D2X8 372 aa11.18□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Ccp110Q7TSH4 1004 aa11.18□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Hook1Q8BIL5 728 aa11.18□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Taok2Q6ZQ29 1240 aa11.17□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 NexnQ7TPW1 607 aa11.17□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Ccdc43Q9CR29 222 aaKnown RBP11.17□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 CrcpO35427 148 aa11.17□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 PnisrA2AJT4 805 aaKnown RBP11.17□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Vps8Q0P5W1 1427 aa11.17□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Pank1Q8K4K6 548 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 FanciQ8K368 1330 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Iqgap2Q3UQ44 1575 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 FosbP13346 338 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Puf60Q3UEB3 564 aaKnown RBP11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Cetn4Q8K4K1 168 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Plekhh1Q80TI1 1356 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Nectin2P32507 530 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Gpatch3Q8BIY1 525 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Hmgn5Q9JL35 406 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Sv2bQ8BG39 683 aa11.16□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Cfdp1O88271 295 aaKnown RBP11.15□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Chmp4cQ9D7F7 232 aa11.15□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Cyp46a1Q9WVK8 500 aa11.15□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Ccdc34Q3UI66 367 aa11.15□□□□□ -0.62
Pdgfra-201ENSMUST00000000476 Arid4aF8VPQ2 1261 aaKnown RBP11.14□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Pde4cQ3UEI1 686 aa11.14□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Nutm1Q8BHP2 1126 aa11.14□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Ift140E9PY46 1464 aa11.14□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 BcanQ61361 883 aa11.14□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Cchcr1Q8K2I2 770 aa11.14□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Prkrip1Q9CWV6 186 aaKnown RBP11.14□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Mad1l1Q9WTX8 717 aaKnown RBP11.14□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Arhgap5P97393 1501 aa11.14□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Prdm16A2A935 1275 aa11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Kif3aP28741 701 aa11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Zpr1Q62384 459 aa11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Taf3Q5HZG4 932 aa11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Fam193aQ8CGI1 1231 aaKnown RBP11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Chrna2Q91X60 512 aa11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Atp2b2Q9R0K7 1198 aa11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Bcl2l13P59017 434 aa11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Cc2d2aQ8CFW7 1633 aa11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Ccdc171E9Q1U1 1324 aa11.13□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Mphosph10Q810V0 681 aaKnown RBP11.12□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 TatQ8QZR1 454 aa11.12□□□□□ -0.63
Pdgfra-201ENSMUST00000000476 Hnrnpul1Q8VDM6 859 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 75.5 ms