RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B COA1P40452 197 aa-0.87□□□□□ -2.55
snR39BsnR39B GCD14P46959 383 aaPredicted RBP-0.87□□□□□ -2.55
snR39BsnR39B YLR413WQ06689 675 aa-0.87□□□□□ -2.55
snR39BsnR39B TAR1Q8TGM6 124 aa-0.87□□□□□ -2.55
snR39BsnR39B TIM9O74700 87 aa-0.88□□□□□ -2.55
snR39BsnR39B YOL013W-AP0C272 63 aaPredicted RBP-0.88□□□□□ -2.55
snR39BsnR39B YLR157W-EP0CF00 54 aa-0.88□□□□□ -2.55
snR39BsnR39B DAL80P26343 269 aa-0.88□□□□□ -2.55
snR39BsnR39B GVP36P40531 326 aaKnown RBP-0.88□□□□□ -2.55
snR39BsnR39B RPS29BP41058 56 aaKnown RBP-0.88□□□□□ -2.55
snR39BsnR39B ILM1P47155 203 aa-0.88□□□□□ -2.55
snR39BsnR39B ABF2Q02486 183 aa-0.88□□□□□ -2.55
snR39BsnR39B SPO19Q03029 223 aa-0.88□□□□□ -2.55
snR39BsnR39B TMA23Q03525 211 aa-0.88□□□□□ -2.55
snR39BsnR39B YML096WQ04489 525 aa-0.88□□□□□ -2.55
snR39BsnR39B YPR117WQ06116 2489 aa-0.89□□□□□ -2.55
snR39BsnR39B RPL43AP0CX25 92 aaKnown RBP-0.89□□□□□ -2.55
snR39BsnR39B RPL43BP0CX26 92 aa-0.89□□□□□ -2.55
snR39BsnR39B MEK1P24719 497 aaPredicted RBP-0.89□□□□□ -2.55
snR39BsnR39B HOM6P31116 359 aaKnown RBP-0.89□□□□□ -2.55
snR39BsnR39B SGE1P33335 543 aa-0.89□□□□□ -2.55
snR39BsnR39B YHL018WP38744 120 aaPredicted RBP-0.89□□□□□ -2.55
snR39BsnR39B YKR005CQ02203 525 aa-0.89□□□□□ -2.55
snR39BsnR39B MET31Q03081 177 aa-0.89□□□□□ -2.55
snR39BsnR39B OST6Q03723 332 aa-0.89□□□□□ -2.55
snR39BsnR39B YDR248CQ03786 193 aa-0.89□□□□□ -2.55
snR39BsnR39B SEI1Q06058 285 aa-0.89□□□□□ -2.55
snR39BsnR39B YPR098CQ06089 161 aa-0.89□□□□□ -2.55
snR39BsnR39B YPR174CQ06616 221 aaPredicted RBP-0.89□□□□□ -2.55
snR39BsnR39B FYV12Q08559 129 aa-0.89□□□□□ -2.55
snR39BsnR39B FIT2Q08906 153 aa-0.89□□□□□ -2.55
snR39BsnR39B TSC3Q3E790 80 aa-0.89□□□□□ -2.55
snR39BsnR39B FAS1P07149 2051 aaKnown RBP-0.89□□□□□ -2.55
snR39BsnR39B GCD2P12754 651 aaPredicted RBP-0.9□□□□□ -2.55
snR39BsnR39B RIB1P38066 345 aa-0.9□□□□□ -2.55
snR39BsnR39B YBR285WP38354 144 aa-0.9□□□□□ -2.55
snR39BsnR39B PRS2P38620 318 aaKnown RBP-0.9□□□□□ -2.55
snR39BsnR39B YJR015WP47090 510 aa-0.9□□□□□ -2.55
snR39BsnR39B DID2P69771 204 aa-0.9□□□□□ -2.55
snR39BsnR39B DAD4P69851 72 aa-0.9□□□□□ -2.55
snR39BsnR39B FIT1Q04433 528 aa-0.9□□□□□ -2.55
snR39BsnR39B ERV41Q04651 352 aa-0.9□□□□□ -2.55
snR39BsnR39B ABP140Q08641 628 aaKnown RBP-0.9□□□□□ -2.55
snR39BsnR39B SNF2P22082 1703 aa-0.9□□□□□ -2.55
snR39BsnR39B HIS1P00498 297 aaKnown RBP-0.91□□□□□ -2.56
snR39BsnR39B MSF1P08425 469 aa-0.91□□□□□ -2.56
snR39BsnR39B YCR001WP25347 104 aa-0.91□□□□□ -2.56
snR39BsnR39B POP4P38336 279 aa-0.91□□□□□ -2.56
snR39BsnR39B SNZ1Q03148 297 aa-0.91□□□□□ -2.56
snR39BsnR39B UPS3Q04006 179 aa-0.91□□□□□ -2.56
snR39BsnR39B LPP1Q04396 274 aa-0.91□□□□□ -2.56
snR39BsnR39B GMC2Q06201 188 aa-0.91□□□□□ -2.56
snR39BsnR39B MCP1Q12106 302 aa-0.91□□□□□ -2.56
snR39BsnR39B SPO13P23624 291 aa-0.92□□□□□ -2.56
snR39BsnR39B ATG22P25568 528 aa-0.92□□□□□ -2.56
snR39BsnR39B SEC17P32602 292 aa-0.92□□□□□ -2.56
snR39BsnR39B YKL075CP36083 450 aa-0.92□□□□□ -2.56
snR39BsnR39B MRPL28P36527 147 aa-0.92□□□□□ -2.56
snR39BsnR39B MRX5P47007 382 aa-0.92□□□□□ -2.56
snR39BsnR39B NUP84P52891 726 aa-0.92□□□□□ -2.56
snR39BsnR39B PNC1P53184 216 aaKnown RBP-0.92□□□□□ -2.56
snR39BsnR39B MPC3P53311 146 aa-0.92□□□□□ -2.56
snR39BsnR39B VPS71Q03433 280 aa-0.92□□□□□ -2.56
snR39BsnR39B YML108WQ03759 105 aa-0.92□□□□□ -2.56
snR39BsnR39B MGR3Q04472 501 aa-0.92□□□□□ -2.56
snR39BsnR39B FMP16Q12497 93 aa-0.92□□□□□ -2.56
snR39BsnR39B COX8P04039 78 aa-0.93□□□□□ -2.56
snR39BsnR39B RPL27AP0C2H6 136 aaKnown RBP-0.93□□□□□ -2.56
snR39BsnR39B YHR127WP38833 243 aaKnown RBP-0.93□□□□□ -2.56
snR39BsnR39B YMD8Q03697 442 aa-0.93□□□□□ -2.56
snR39BsnR39B RNH202Q05635 350 aa-0.93□□□□□ -2.56
snR39BsnR39B UPS1Q05776 175 aa-0.93□□□□□ -2.56
snR39BsnR39B TOR2P32600 2474 aaKnown RBP-0.93□□□□□ -2.56
snR39BsnR39B MAK5P38112 773 aaPredicted RBP-0.94□□□□□ -2.56
snR39BsnR39B LAP3Q01532 483 aaKnown RBP RIP-Chip data-0.94□□□□□ -2.56not detected
snR39BsnR39B RCF1Q03713 159 aa-0.94□□□□□ -2.56
snR39BsnR39B ELP6Q04868 273 aa-0.94□□□□□ -2.56
snR39BsnR39B YFR032C-BQ8TGU2 87 aa-0.94□□□□□ -2.56
snR39BsnR39B YDR157WA0A023PZE8 133 aa-0.95□□□□□ -2.56
snR39BsnR39B COX2P00410 251 aa-0.95□□□□□ -2.56
snR39BsnR39B MGM101P32787 269 aaKnown RBP-0.95□□□□□ -2.56
snR39BsnR39B UTP30P36144 274 aaKnown RBP-0.95□□□□□ -2.56
snR39BsnR39B SKG1P36169 355 aa-0.95□□□□□ -2.56
snR39BsnR39B BFR1P38934 470 aaKnown RBP RIP-Chip data-0.95□□□□□ -2.56not detected
snR39BsnR39B UBC12P52491 188 aa-0.95□□□□□ -2.56
snR39BsnR39B RHO3Q00245 231 aaKnown RBP-0.95□□□□□ -2.56
snR39BsnR39B SPT7P35177 1332 aa-0.95□□□□□ -2.56
snR39BsnR39B OSW5P40219 148 aa-0.96□□□□□ -2.56
snR39BsnR39B YJR149WP47177 404 aa-0.96□□□□□ -2.56
snR39BsnR39B USE1P53146 245 aa-0.96□□□□□ -2.56
snR39BsnR39B THG1P53215 237 aaKnown RBP-0.96□□□□□ -2.56
snR39BsnR39B YDR274CP87283 123 aa-0.96□□□□□ -2.56
snR39BsnR39B PRP11Q07350 266 aaPredicted RBP-0.96□□□□□ -2.56
snR39BsnR39B JLP1Q12358 412 aa-0.96□□□□□ -2.56
snR39BsnR39B PHO85P17157 305 aa-0.97□□□□□ -2.56
snR39BsnR39B DDR48P18899 430 aaKnown RBP-0.97□□□□□ -2.56
snR39BsnR39B SRB4P32569 687 aa-0.97□□□□□ -2.56
snR39BsnR39B PAN3P36102 679 aaPredicted RBP-0.97□□□□□ -2.56
snR39BsnR39B SLM6P38343 150 aa-0.97□□□□□ -2.56
snR39BsnR39B ERG28P40030 148 aa-0.97□□□□□ -2.56
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms