RNA–Protein interactions for RNA: snR13

snR13, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR13, Length 124 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR13	snR13	MRPL28	P36527	147 aa		0.73	□□□□□ -2.29
snR13	snR13	MRPL17	P36528	281 aa		0.73	□□□□□ -2.29
snR13	snR13	EAF6	P47128	113 aa		0.73	□□□□□ -2.29
snR13	snR13	RPL37A	P49166	88 aa	Known RBP	0.73	□□□□□ -2.29
snR13	snR13	PRM8	P53174	237 aa		0.73	□□□□□ -2.29
snR13	snR13	POP3	P53833	195 aa	Predicted RBP	0.73	□□□□□ -2.29
snR13	snR13	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.73	□□□□□ -2.29	not detected
snR13	snR13	SWP1	Q02795	286 aa		0.73	□□□□□ -2.29
snR13	snR13	GAS3	Q03655	524 aa		0.73	□□□□□ -2.29
snR13	snR13	YNL146C-A	Q3E7Z1	64 aa		0.73	□□□□□ -2.29
snR13	snR13	SPT3	P06844	337 aa		0.72	□□□□□ -2.29
snR13	snR13	CUS2	P53830	285 aa	Predicted RBP	0.72	□□□□□ -2.29
snR13	snR13	FSF1	Q12029	327 aa	Known RBP	0.72	□□□□□ -2.29
snR13	snR13	TIM9	O74700	87 aa		0.71	□□□□□ -2.3
snR13	snR13	URA6	P15700	204 aa		0.71	□□□□□ -2.3
snR13	snR13	MSN4	P33749	630 aa		0.71	□□□□□ -2.3
snR13	snR13	SRY1	P36007	326 aa		0.71	□□□□□ -2.3
snR13	snR13	YBR209W	P38311	105 aa		0.71	□□□□□ -2.3
snR13	snR13	COX15	P40086	486 aa		0.71	□□□□□ -2.3
snR13	snR13	FMC1	P40491	155 aa		0.71	□□□□□ -2.3
snR13	snR13	LIA1	P47120	325 aa	Known RBP	0.71	□□□□□ -2.3
snR13	snR13	KNH1	P50112	268 aa		0.71	□□□□□ -2.3
snR13	snR13	TDA8	Q6B2U8	126 aa		0.71	□□□□□ -2.3
snR13	snR13	INO80	P53115	1489 aa		0.7	□□□□□ -2.3
snR13	snR13	YCR016W	P25617	290 aa	Known RBP	0.7	□□□□□ -2.3
snR13	snR13	SKG1	P36169	355 aa		0.7	□□□□□ -2.3
snR13	snR13	GVP36	P40531	326 aa	Known RBP	0.7	□□□□□ -2.3
snR13	snR13	PET117	Q02771	107 aa		0.7	□□□□□ -2.3
snR13	snR13	GPM2	Q12008	311 aa		0.7	□□□□□ -2.3
snR13	snR13	ATG40	Q99325	256 aa		0.7	□□□□□ -2.3
snR13	snR13	CFT1	Q06632	1357 aa	Known RBP	0.7	□□□□□ -2.3
snR13	snR13	CDC28	P00546	298 aa	Known RBP	0.69	□□□□□ -2.3
snR13	snR13	SIR2	P06700	562 aa		0.69	□□□□□ -2.3
snR13	snR13	AQY2	P0CD90	149 aa		0.69	□□□□□ -2.3
snR13	snR13	MATALPHA1	P0CY06	175 aa		0.69	□□□□□ -2.3
snR13	snR13	HMLALPHA1	P0CY07	175 aa		0.69	□□□□□ -2.3
snR13	snR13	NSP1	P14907	823 aa	Known RBP	0.69	□□□□□ -2.3
snR13	snR13	KDX1	P36005	433 aa		0.69	□□□□□ -2.3
snR13	snR13	YEL067C	P39978	195 aa		0.69	□□□□□ -2.3
snR13	snR13	RPC17	P47076	161 aa		0.69	□□□□□ -2.3
snR13	snR13	FYV6	P53913	173 aa		0.69	□□□□□ -2.3
snR13	snR13	CDC123	Q05791	360 aa		0.69	□□□□□ -2.3
snR13	snR13	MCP1	Q12106	302 aa		0.69	□□□□□ -2.3
snR13	snR13	PBN1	P25580	416 aa		0.68	□□□□□ -2.3
snR13	snR13	SEC17	P32602	292 aa		0.68	□□□□□ -2.3
snR13	snR13	YBR285W	P38354	144 aa		0.68	□□□□□ -2.3
snR13	snR13	PRE6	P40303	254 aa	Known RBP	0.68	□□□□□ -2.3
snR13	snR13	HUA1	P40325	198 aa		0.68	□□□□□ -2.3
snR13	snR13	BXI1	P48558	297 aa		0.68	□□□□□ -2.3
snR13	snR13	BRR6	P53062	197 aa		0.68	□□□□□ -2.3
snR13	snR13	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.68	□□□□□ -2.3	not detected
snR13	snR13	YMR007W	Q03675	126 aa		0.68	□□□□□ -2.3
snR13	snR13	YLR283W	Q05867	314 aa		0.68	□□□□□ -2.3
snR13	snR13	YLR236C	A0A023PZG4	107 aa		0.67	□□□□□ -2.3
snR13	snR13	DBF2	P22204	572 aa		0.67	□□□□□ -2.3
snR13	snR13	TCA17	P32613	152 aa		0.67	□□□□□ -2.3
snR13	snR13	SSO1	P32867	290 aa		0.67	□□□□□ -2.3
snR13	snR13	APS1	P35181	156 aa		0.67	□□□□□ -2.3
snR13	snR13	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	not detected
snR13	snR13	UTP30	P36144	274 aa	Known RBP	0.67	□□□□□ -2.3
snR13	snR13	OPY1	P38271	328 aa		0.67	□□□□□ -2.3
snR13	snR13	FAR7	P43592	221 aa		0.67	□□□□□ -2.3
snR13	snR13	ARO8	P53090	500 aa	Known RBP	0.67	□□□□□ -2.3
snR13	snR13	CUE4	Q04201	117 aa	Predicted RBP	0.67	□□□□□ -2.3
snR13	snR13	YER188C-A	P0C0V2	99 aa		0.66	□□□□□ -2.3
snR13	snR13	SIP3	P38717	1229 aa		0.66	□□□□□ -2.3
snR13	snR13	SOK1	P40317	901 aa		0.66	□□□□□ -2.3
snR13	snR13	YAE1	P47118	141 aa	Predicted RBP	0.66	□□□□□ -2.3
snR13	snR13	RPL37B	P51402	88 aa	Known RBP	0.66	□□□□□ -2.3
snR13	snR13	RCE1	Q03530	315 aa		0.66	□□□□□ -2.3
snR13	snR13	RHO1	P06780	209 aa	Known RBP	0.65	□□□□□ -2.31
snR13	snR13	YHR212W-A	P0CX91	67 aa		0.65	□□□□□ -2.31
snR13	snR13	SEC11	P15367	167 aa		0.65	□□□□□ -2.31
snR13	snR13	BET1	P22804	142 aa		0.65	□□□□□ -2.31
snR13	snR13	AST2	P39945	430 aa	Known RBP	0.65	□□□□□ -2.31
snR13	snR13	RMD6	P39975	231 aa		0.65	□□□□□ -2.31
snR13	snR13	EDC3	P39998	551 aa	Known RBP	0.65	□□□□□ -2.31
snR13	snR13	MIC26	P50087	233 aa		0.65	□□□□□ -2.31
snR13	snR13	ALG13	P53178	202 aa		0.65	□□□□□ -2.31
snR13	snR13	YDR274C	P87283	123 aa		0.65	□□□□□ -2.31
snR13	snR13	RRN5	Q02983	363 aa		0.65	□□□□□ -2.31
snR13	snR13	RAD28	Q12021	506 aa		0.65	□□□□□ -2.31
snR13	snR13	URA5	P13298	226 aa	Known RBP	0.64	□□□□□ -2.31
snR13	snR13	KSS1	P14681	368 aa		0.64	□□□□□ -2.31
snR13	snR13	VMA6	P32366	345 aa	Known RBP	0.64	□□□□□ -2.31
snR13	snR13	MIC12	P38341	106 aa		0.64	□□□□□ -2.31
snR13	snR13	VMA22	P38784	181 aa		0.64	□□□□□ -2.31
snR13	snR13	FLX1	P40464	311 aa		0.64	□□□□□ -2.31
snR13	snR13	YDR249C	Q03787	373 aa		0.64	□□□□□ -2.31
snR13	snR13	YHR007C-A	Q07074	71 aa		0.64	□□□□□ -2.31
snR13	snR13	RPL28	P02406	149 aa	Known RBP	0.63	□□□□□ -2.31
snR13	snR13	YMR31	P19955	123 aa		0.63	□□□□□ -2.31
snR13	snR13	AIM36	Q03798	255 aa		0.63	□□□□□ -2.31
snR13	snR13	THP2	O13539	261 aa	Known RBP	0.62	□□□□□ -2.31
snR13	snR13	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
snR13	snR13	PTM1	P32857	523 aa		0.62	□□□□□ -2.31
snR13	snR13	YNL247W	P53852	767 aa	Known RBP	0.62	□□□□□ -2.31
snR13	snR13	CWC27	Q02770	301 aa		0.62	□□□□□ -2.31
snR13	snR13	YHR214C-E	Q8TGK0	99 aa		0.62	□□□□□ -2.31
snR13	snR13	RPL27A	P0C2H6	136 aa	Known RBP	0.61	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms