RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W AAH1P53909 347 aa1.96□□□□□ -2.1
SEC16YPL085W TVP18Q04767 167 aa1.96□□□□□ -2.1
SEC16YPL085W YDL177CQ12257 170 aa1.96□□□□□ -2.1
SEC16YPL085W MCT1Q12283 360 aa1.96□□□□□ -2.1
SEC16YPL085W PMD1P32634 1753 aa1.96□□□□□ -2.1
SEC16YPL085W PUT3P25502 979 aaPredicted RBP1.96□□□□□ -2.1
SEC16YPL085W YHR180WP38868 163 aa1.96□□□□□ -2.1
SEC16YPL085W PEX7P39108 375 aa1.96□□□□□ -2.1
SEC16YPL085W VPS28Q02767 242 aa1.96□□□□□ -2.1
SEC16YPL085W MET31Q03081 177 aa1.96□□□□□ -2.1
SEC16YPL085W TMA23Q03525 211 aa1.96□□□□□ -2.1
SEC16YPL085W TY1A-DR2Q03964 440 aaKnown RBP1.96□□□□□ -2.1
SEC16YPL085W RRG7Q08774 242 aaPredicted RBP1.96□□□□□ -2.1
SEC16YPL085W HAL9Q12180 1030 aa1.96□□□□□ -2.1
SEC16YPL085W Q0182Q9ZZW1 134 aa1.96□□□□□ -2.1
SEC16YPL085W MSK1P32048 576 aa1.95□□□□□ -2.1
SEC16YPL085W PHD1P36093 366 aa1.95□□□□□ -2.1
SEC16YPL085W SSH1P38353 490 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W TIF34P40217 347 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W YGR149WP48236 432 aa1.95□□□□□ -2.1
SEC16YPL085W STD1Q02794 444 aa1.95□□□□□ -2.1
SEC16YPL085W DIG1Q03063 452 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W YFT2Q06676 274 aa1.95□□□□□ -2.1
SEC16YPL085W YOP1Q12402 180 aa1.95□□□□□ -2.1
SEC16YPL085W CPT1P17898 393 aa1.95□□□□□ -2.1
SEC16YPL085W YCR061WP25639 631 aa1.95□□□□□ -2.1
SEC16YPL085W ERG2P32352 222 aa1.95□□□□□ -2.1
SEC16YPL085W MIX23P38162 196 aa1.95□□□□□ -2.1
SEC16YPL085W CDS1P38221 457 aa1.95□□□□□ -2.1
SEC16YPL085W YER079WP40052 210 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W SFH1Q06168 426 aa1.95□□□□□ -2.1
SEC16YPL085W YPL257WQ08974 193 aa1.95□□□□□ -2.1
SEC16YPL085W ATX2Q12067 313 aa1.95□□□□□ -2.1
SEC16YPL085W RKI1Q12189 258 aa1.95□□□□□ -2.1
SEC16YPL085W BMT6Q12291 365 aa1.95□□□□□ -2.1
SEC16YPL085W YLR365WQ7LIF2 110 aa1.95□□□□□ -2.1
SEC16YPL085W AAC1P04710 309 aa1.95□□□□□ -2.1
SEC16YPL085W DST1P07273 309 aa1.95□□□□□ -2.1
SEC16YPL085W HSP12P22943 109 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W MRP49P32388 137 aa1.95□□□□□ -2.1
SEC16YPL085W SDH4P37298 181 aa1.95□□□□□ -2.1
SEC16YPL085W PRS4P38063 326 aaPredicted RBP1.95□□□□□ -2.1
SEC16YPL085W MOH1P38191 138 aa1.95□□□□□ -2.1
SEC16YPL085W SNF11P38956 169 aa1.95□□□□□ -2.1
SEC16YPL085W VNX1P42839 908 aa1.95□□□□□ -2.1
SEC16YPL085W CIS3P47001 227 aa1.95□□□□□ -2.1
SEC16YPL085W GPI14P47088 403 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W YGL159WP53110 370 aa1.95□□□□□ -2.1
SEC16YPL085W YGL039WP53183 348 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W OCA2P53949 197 aa1.95□□□□□ -2.1
SEC16YPL085W SYM1Q06563 197 aa1.95□□□□□ -2.1
SEC16YPL085W YOL073CQ08232 322 aa1.95□□□□□ -2.1
SEC16YPL085W MMT2Q08970 484 aa1.95□□□□□ -2.1
SEC16YPL085W YLR118CQ12354 227 aa1.95□□□□□ -2.1
SEC16YPL085W ADH2P00331 348 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W MDH2P22133 377 aa1.95□□□□□ -2.1
SEC16YPL085W YBL010CP32788 280 aa1.95□□□□□ -2.1
SEC16YPL085W SLM6P38343 150 aa1.95□□□□□ -2.1
SEC16YPL085W FYV4P38783 130 aaPredicted RBP1.95□□□□□ -2.1
SEC16YPL085W LTP1P40347 161 aa1.95□□□□□ -2.1
SEC16YPL085W FMC1P40491 155 aa1.95□□□□□ -2.1
SEC16YPL085W YPS6P40583 537 aa1.95□□□□□ -2.1
SEC16YPL085W YJL118WP47022 219 aa1.95□□□□□ -2.1
SEC16YPL085W APC9Q12107 265 aa1.95□□□□□ -2.1
SEC16YPL085W BSC1Q12140 328 aa1.95□□□□□ -2.1
SEC16YPL085W YLR342W-AQ3E810 57 aa1.95□□□□□ -2.1
SEC16YPL085W NAG1Q8TGN9 163 aa1.95□□□□□ -2.1
SEC16YPL085W RPL20AP0CX23 172 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W RPL20BP0CX24 172 aaPredicted RBP1.95□□□□□ -2.1
SEC16YPL085W RPL3P14126 387 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W CTA1P15202 515 aa1.95□□□□□ -2.1
SEC16YPL085W RPL24BP24000 155 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W YOX1P34161 385 aa1.95□□□□□ -2.1
SEC16YPL085W YKL187CP34231 750 aa1.95□□□□□ -2.1
SEC16YPL085W MEP2P41948 499 aa1.95□□□□□ -2.1
SEC16YPL085W TAF4P50105 388 aa1.95□□□□□ -2.1
SEC16YPL085W YGL118CP53132 145 aa1.95□□□□□ -2.1
SEC16YPL085W YGL114WP53134 725 aa1.95□□□□□ -2.1
SEC16YPL085W ERV25P54837 211 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W PAL1Q05518 499 aaKnown RBP1.95□□□□□ -2.1
SEC16YPL085W RRG8Q06109 277 aa1.95□□□□□ -2.1
SEC16YPL085W CDC21P06785 304 aa1.94□□□□□ -2.1
SEC16YPL085W SCO1P23833 295 aa1.94□□□□□ -2.1
SEC16YPL085W ERG4P25340 473 aa1.94□□□□□ -2.1
SEC16YPL085W NFS1P25374 497 aa1.94□□□□□ -2.1
SEC16YPL085W MRPL9P31334 269 aa1.94□□□□□ -2.1
SEC16YPL085W TAE1P38340 232 aa1.94□□□□□ -2.1
SEC16YPL085W GEP4P38812 185 aa1.94□□□□□ -2.1
SEC16YPL085W REE1P40893 198 aa1.94□□□□□ -2.1
SEC16YPL085W GPI2P46961 280 aa1.94□□□□□ -2.1
SEC16YPL085W GWT1P47026 490 aa1.94□□□□□ -2.1
SEC16YPL085W VHT1P53241 593 aa1.94□□□□□ -2.1
SEC16YPL085W EOS1P53938 366 aa1.94□□□□□ -2.1
SEC16YPL085W RNH201P53942 307 aa1.94□□□□□ -2.1
SEC16YPL085W GRX5Q02784 150 aa1.94□□□□□ -2.1
SEC16YPL085W UTP15Q04305 513 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W YPL264CQ08980 353 aa1.94□□□□□ -2.1
SEC16YPL085W YPL247CQ12523 523 aa1.94□□□□□ -2.1
SEC16YPL085W RPL9AP05738 191 aaKnown RBP1.94□□□□□ -2.1
SEC16YPL085W MRPL33P20084 86 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms