RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C MAK3Q03503 176 aa8.4□□□□□ -1.06
SSN3YPL042C TMA10Q06177 86 aa8.4□□□□□ -1.06
SSN3YPL042C LDS2Q08218 356 aa8.4□□□□□ -1.06
SSN3YPL042C YGL194C-AQ2V2P6 80 aa8.4□□□□□ -1.06
SSN3YPL042C YBR298C-AQ8TGK4 73 aa8.4□□□□□ -1.06
SSN3YPL042C CHO1P08456 276 aa8.4□□□□□ -1.07
SSN3YPL042C YCL002CP25565 263 aa8.4□□□□□ -1.07
SSN3YPL042C LSM4P40070 187 aaKnown RBP8.4□□□□□ -1.07
SSN3YPL042C YDL186WP48568 277 aa8.4□□□□□ -1.07
SSN3YPL042C SMX3P54999 86 aaPredicted RBP8.4□□□□□ -1.07
SSN3YPL042C DIG2Q03373 323 aaKnown RBP8.4□□□□□ -1.07
SSN3YPL042C PCL9Q12477 304 aa8.4□□□□□ -1.07
SSN3YPL042C PRM4Q12498 284 aa8.4□□□□□ -1.07
SSN3YPL042C CPR1P14832 162 aaKnown RBP8.39□□□□□ -1.07
SSN3YPL042C SLM6P38343 150 aa8.39□□□□□ -1.07
SSN3YPL042C ARO9P38840 513 aaPredicted RBP8.39□□□□□ -1.07
SSN3YPL042C PGA1P53896 198 aa8.39□□□□□ -1.07
SSN3YPL042C LRS4Q04087 347 aaKnown RBP8.39□□□□□ -1.07
SSN3YPL042C TSA2Q04120 196 aa8.39□□□□□ -1.07
SSN3YPL042C SEI1Q06058 285 aa8.39□□□□□ -1.07
SSN3YPL042C PEX27Q08580 376 aa8.39□□□□□ -1.07
SSN3YPL042C TAD3Q9URQ3 322 aa8.39□□□□□ -1.07
SSN3YPL042C RAS1P01119 309 aa8.38□□□□□ -1.07
SSN3YPL042C STE4P18851 423 aa8.38□□□□□ -1.07
SSN3YPL042C ARO7P32178 256 aa8.38□□□□□ -1.07
SSN3YPL042C KTI12P34253 313 aaKnown RBP8.38□□□□□ -1.07
SSN3YPL042C YKR041WP36134 250 aa8.38□□□□□ -1.07
SSN3YPL042C CUP9P41817 306 aa8.38□□□□□ -1.07
SSN3YPL042C AVT4P50944 713 aa8.38□□□□□ -1.07
SSN3YPL042C CGI121Q03705 181 aaKnown RBP8.38□□□□□ -1.07
SSN3YPL042C COQ11Q05892 277 aa8.38□□□□□ -1.07
SSN3YPL042C WTM2Q12206 467 aa8.38□□□□□ -1.07
SSN3YPL042C RPL28P02406 149 aaKnown RBP8.37□□□□□ -1.07
SSN3YPL042C YLL053CP0CD98 152 aa8.37□□□□□ -1.07
SSN3YPL042C ARF1P11076 181 aaKnown RBP8.37□□□□□ -1.07
SSN3YPL042C MRP49P32388 137 aa8.37□□□□□ -1.07
SSN3YPL042C REC114P32841 428 aa8.37□□□□□ -1.07
SSN3YPL042C RPP1P38786 293 aa8.37□□□□□ -1.07
SSN3YPL042C YIL060WP40519 144 aa8.37□□□□□ -1.07
SSN3YPL042C YIR035CP40579 254 aa8.37□□□□□ -1.07
SSN3YPL042C PHO23P50947 330 aa8.37□□□□□ -1.07
SSN3YPL042C YLR346CQ06139 101 aa8.37□□□□□ -1.07
SSN3YPL042C ENB1Q08299 606 aa8.37□□□□□ -1.07
SSN3YPL042C MCP1Q12106 302 aa8.37□□□□□ -1.07
SSN3YPL042C YDL177CQ12257 170 aa8.37□□□□□ -1.07
SSN3YPL042C RAX2Q12465 1220 aa8.37□□□□□ -1.07
SSN3YPL042C YBR182C-AQ8TGU6 64 aa8.37□□□□□ -1.07
SSN3YPL042C DIF1O13577 133 aa8.37□□□□□ -1.07
SSN3YPL042C FCY2P17064 533 aa8.37□□□□□ -1.07
SSN3YPL042C HSP150P32478 413 aa8.37□□□□□ -1.07
SSN3YPL042C GPX1P36014 167 aa8.37□□□□□ -1.07
SSN3YPL042C UTP30P36144 274 aaKnown RBP8.37□□□□□ -1.07
SSN3YPL042C DOG2P38773 246 aa8.37□□□□□ -1.07
SSN3YPL042C YNL208WP40159 199 aaKnown RBP8.37□□□□□ -1.07
SSN3YPL042C YTH1Q06102 208 aaPredicted RBP8.37□□□□□ -1.07
SSN3YPL042C RPL40AP0CH08 128 aaKnown RBP8.36□□□□□ -1.07
SSN3YPL042C RPL40BP0CH09 128 aaKnown RBP8.36□□□□□ -1.07
SSN3YPL042C PRE2P30656 287 aaKnown RBP8.36□□□□□ -1.07
SSN3YPL042C TRS65P32893 560 aa8.36□□□□□ -1.07
SSN3YPL042C PRY2P36110 329 aa8.36□□□□□ -1.07
SSN3YPL042C GPX2P38143 162 aa8.36□□□□□ -1.07
SSN3YPL042C SHE1P38200 338 aa8.36□□□□□ -1.07
SSN3YPL042C YPC1P38298 316 aa8.36□□□□□ -1.07
SSN3YPL042C YFR054CP43622 192 aa8.36□□□□□ -1.07
SSN3YPL042C ALG13P53178 202 aa8.36□□□□□ -1.07
SSN3YPL042C SCW11P53189 542 aa8.36□□□□□ -1.07
SSN3YPL042C CUZ1P53899 274 aa8.36□□□□□ -1.07
SSN3YPL042C AIM36Q03798 255 aa8.36□□□□□ -1.07
SSN3YPL042C MDM32Q12171 622 aa8.36□□□□□ -1.07
SSN3YPL042C GPM1P00950 247 aaKnown RBP8.35□□□□□ -1.07
SSN3YPL042C RPS18AP0CX55 146 aaKnown RBP8.35□□□□□ -1.07
SSN3YPL042C RPS18BP0CX56 146 aaPredicted RBP8.35□□□□□ -1.07
SSN3YPL042C PCL1P24867 279 aa8.35□□□□□ -1.07
SSN3YPL042C HOM6P31116 359 aaKnown RBP8.35□□□□□ -1.07
SSN3YPL042C SPS18P32572 300 aa8.35□□□□□ -1.07
SSN3YPL042C NSE4P43124 402 aa8.35□□□□□ -1.07
SSN3YPL042C TDA6Q06466 467 aa8.35□□□□□ -1.07
SSN3YPL042C YPR014CQ6B0W2 109 aa8.35□□□□□ -1.07
SSN3YPL042C IRA1P18963 3092 aa8.34□□□□□ -1.07
SSN3YPL042C VAR1P02381 398 aa8.34□□□□□ -1.07
SSN3YPL042C MAG1P22134 296 aaKnown RBP8.34□□□□□ -1.07
SSN3YPL042C ELO2P25358 347 aa8.34□□□□□ -1.07
SSN3YPL042C SFK1P35735 353 aa8.34□□□□□ -1.07
SSN3YPL042C PAN3P36102 679 aaPredicted RBP8.34□□□□□ -1.07
SSN3YPL042C YHR180WP38868 163 aa8.34□□□□□ -1.07
SSN3YPL042C PFS2P42841 465 aaKnown RBP8.34□□□□□ -1.07
SSN3YPL042C UBX6P47049 396 aa8.34□□□□□ -1.07
SSN3YPL042C UBC11P52492 156 aa8.34□□□□□ -1.07
SSN3YPL042C HNT1Q04344 158 aaKnown RBP8.34□□□□□ -1.07
SSN3YPL042C MDM30Q05930 598 aa8.34□□□□□ -1.07
SSN3YPL042C CTR3Q06686 241 aa8.34□□□□□ -1.07
SSN3YPL042C MCH1Q07376 486 aa8.34□□□□□ -1.07
SSN3YPL042C COQ10Q08058 207 aa8.34□□□□□ -1.07
SSN3YPL042C YOR376WQ08900 122 aa8.34□□□□□ -1.07
SSN3YPL042C FEX2Q08991 375 aa8.34□□□□□ -1.07
SSN3YPL042C FRE7Q12333 620 aa8.34□□□□□ -1.07
SSN3YPL042C YLR099W-AQ3E798 87 aa8.34□□□□□ -1.07
SSN3YPL042C RIP1P08067 215 aa8.34□□□□□ -1.08
SSN3YPL042C MSK1P32048 576 aa8.34□□□□□ -1.08
SSN3YPL042C HIS7P33734 552 aaKnown RBP8.34□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms