RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C ARR2Q06597 130 aa2.27□□□□□ -2.05
WHI3YNL197C RDS3Q06835 107 aaPredicted RBP2.27□□□□□ -2.05
WHI3YNL197C GRE1Q08969 168 aa2.27□□□□□ -2.05
WHI3YNL197C ADH3P07246 375 aaKnown RBP2.27□□□□□ -2.05
WHI3YNL197C MRS1P07266 363 aa2.27□□□□□ -2.05
WHI3YNL197C ATP7P30902 174 aa2.27□□□□□ -2.05
WHI3YNL197C PRM10P42946 383 aa2.27□□□□□ -2.05
WHI3YNL197C SNX4P47057 423 aa2.27□□□□□ -2.05
WHI3YNL197C YGR026WP53217 278 aa2.27□□□□□ -2.05
WHI3YNL197C DIA1P54005 336 aa2.27□□□□□ -2.05
WHI3YNL197C GAS3Q03655 524 aa2.27□□□□□ -2.05
WHI3YNL197C YOL160WQ08321 113 aa2.27□□□□□ -2.05
WHI3YNL197C YPR096CO13587 100 aa2.26□□□□□ -2.05
WHI3YNL197C PTM1P32857 523 aa2.26□□□□□ -2.05
WHI3YNL197C POP4P38336 279 aa2.26□□□□□ -2.05
WHI3YNL197C YHL026CP38740 315 aa2.26□□□□□ -2.05
WHI3YNL197C COS6P53344 381 aa2.26□□□□□ -2.05
WHI3YNL197C COG5P53951 403 aa2.26□□□□□ -2.05
WHI3YNL197C SLM2P53955 656 aa2.26□□□□□ -2.05
WHI3YNL197C ARO80Q04052 950 aa2.26□□□□□ -2.05
WHI3YNL197C YLR156WP0CE96 114 aa2.25□□□□□ -2.05
WHI3YNL197C YLR159WP0CE97 114 aa2.25□□□□□ -2.05
WHI3YNL197C YLR161WP0CE98 114 aa2.25□□□□□ -2.05
WHI3YNL197C TRM5P38793 499 aa2.25□□□□□ -2.05
WHI3YNL197C YER034WP40022 185 aaKnown RBP2.25□□□□□ -2.05
WHI3YNL197C YIL001WP40560 513 aa2.25□□□□□ -2.05
WHI3YNL197C AIM25P47140 327 aa2.25□□□□□ -2.05
WHI3YNL197C YDR249CQ03787 373 aa2.25□□□□□ -2.05
WHI3YNL197C GPM2Q12008 311 aa2.25□□□□□ -2.05
WHI3YNL197C MCP1Q12106 302 aa2.25□□□□□ -2.05
WHI3YNL197C CLB6P32943 380 aa2.25□□□□□ -2.05
WHI3YNL197C MIX17Q03667 156 aa2.25□□□□□ -2.05
WHI3YNL197C SPG3Q04398 127 aaPredicted RBP2.25□□□□□ -2.05
WHI3YNL197C CDC8P00572 216 aa2.24□□□□□ -2.05
WHI3YNL197C ATG22P25568 528 aa2.24□□□□□ -2.05
WHI3YNL197C DSK2P48510 373 aa2.24□□□□□ -2.05
WHI3YNL197C HOP2P53187 214 aa2.24□□□□□ -2.05
WHI3YNL197C SUE1Q06524 206 aa2.24□□□□□ -2.05
WHI3YNL197C YPL162CQ12042 273 aa2.24□□□□□ -2.05
WHI3YNL197C YFR032C-BQ8TGU2 87 aa2.24□□□□□ -2.05
WHI3YNL197C RPL35AP0CX84 120 aaKnown RBP2.23□□□□□ -2.05
WHI3YNL197C RPL35BP0CX85 120 aaKnown RBP2.23□□□□□ -2.05
WHI3YNL197C MAG1P22134 296 aaKnown RBP2.23□□□□□ -2.05
WHI3YNL197C VMA11P32842 164 aa2.23□□□□□ -2.05
WHI3YNL197C YHR180WP38868 163 aa2.23□□□□□ -2.05
WHI3YNL197C AST2P39945 430 aaKnown RBP2.23□□□□□ -2.05
WHI3YNL197C MNN5P46982 586 aa2.23□□□□□ -2.05
WHI3YNL197C UBC12P52491 188 aa2.23□□□□□ -2.05
WHI3YNL197C RPL25P04456 142 aaKnown RBP2.23□□□□□ -2.05
WHI3YNL197C RMD6P39975 231 aa2.23□□□□□ -2.05
WHI3YNL197C PUT1P09368 476 aa2.22□□□□□ -2.05
WHI3YNL197C KSS1P14681 368 aa2.22□□□□□ -2.05
WHI3YNL197C CNB1P25296 175 aa2.22□□□□□ -2.05
WHI3YNL197C HMF1P40037 129 aaKnown RBP2.22□□□□□ -2.05
WHI3YNL197C IKI3Q06706 1349 aaKnown RBP2.22□□□□□ -2.05
WHI3YNL197C QCR6P00127 147 aa2.21□□□□□ -2.05
WHI3YNL197C MSW1P04803 379 aa2.21□□□□□ -2.05
WHI3YNL197C RME1P32338 300 aaKnown RBP2.21□□□□□ -2.05
WHI3YNL197C EGD2P38879 174 aaKnown RBP2.21□□□□□ -2.05
WHI3YNL197C AIF1P52923 378 aa2.21□□□□□ -2.05
WHI3YNL197C YNL184CP53876 108 aa2.21□□□□□ -2.05
WHI3YNL197C SWP1Q02795 286 aa2.21□□□□□ -2.05
WHI3YNL197C SNO1Q03144 224 aa2.21□□□□□ -2.05
WHI3YNL197C NEJ1Q06148 342 aa2.21□□□□□ -2.05
WHI3YNL197C MDM32Q12171 622 aa2.21□□□□□ -2.05
WHI3YNL197C RPB3P16370 318 aaKnown RBP2.21□□□□□ -2.06
WHI3YNL197C MEI4P29467 408 aa2.21□□□□□ -2.06
WHI3YNL197C POG1P40473 351 aa2.21□□□□□ -2.06
WHI3YNL197C ICE2P40499 491 aa2.21□□□□□ -2.06
WHI3YNL197C NRK1P53915 240 aa2.21□□□□□ -2.06
WHI3YNL197C GIM5Q04493 163 aa2.21□□□□□ -2.06
WHI3YNL197C NOC4Q06512 552 aaPredicted RBP2.21□□□□□ -2.06
WHI3YNL197C ATP15P21306 62 aa2.2□□□□□ -2.06
WHI3YNL197C YOR062CP36025 268 aa2.2□□□□□ -2.06
WHI3YNL197C YKR041WP36134 250 aa2.2□□□□□ -2.06
WHI3YNL197C MRPL17P36528 281 aa2.2□□□□□ -2.06
WHI3YNL197C FMP23P38231 175 aa2.2□□□□□ -2.06
WHI3YNL197C SEC72P39742 193 aaKnown RBP2.2□□□□□ -2.06
WHI3YNL197C EMC6Q12431 108 aa2.2□□□□□ -2.06
WHI3YNL197C MHT1Q12525 324 aa2.2□□□□□ -2.06
WHI3YNL197C YIL177CP40434 1758 aa2.2□□□□□ -2.06
WHI3YNL197C YJL225CP40889 1758 aa2.2□□□□□ -2.06
WHI3YNL197C SIR2P06700 562 aa2.19□□□□□ -2.06
WHI3YNL197C UTR5P32630 166 aa2.19□□□□□ -2.06
WHI3YNL197C YIP3P53633 176 aa2.19□□□□□ -2.06
WHI3YNL197C TSC3Q3E790 80 aa2.19□□□□□ -2.06
WHI3YNL197C IGO2Q9P305 131 aa2.19□□□□□ -2.06
WHI3YNL197C ARP3P47117 449 aaKnown RBP2.19□□□□□ -2.06
WHI3YNL197C CGI121Q03705 181 aaKnown RBP2.19□□□□□ -2.06
WHI3YNL197C YOL024WQ08172 172 aa2.19□□□□□ -2.06
WHI3YNL197C TIM9O74700 87 aa2.18□□□□□ -2.06
WHI3YNL197C GCY1P14065 312 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
WHI3YNL197C BET1P22804 142 aa2.18□□□□□ -2.06
WHI3YNL197C CAF4P36130 643 aa2.18□□□□□ -2.06
WHI3YNL197C SHG1P38337 142 aa2.18□□□□□ -2.06
WHI3YNL197C RTC4P53850 401 aa2.18□□□□□ -2.06
WHI3YNL197C MRPS8Q03799 155 aa2.18□□□□□ -2.06
WHI3YNL197C GRX8Q05926 109 aa2.18□□□□□ -2.06
WHI3YNL197C SMD2Q06217 110 aaKnown RBP2.18□□□□□ -2.06
WHI3YNL197C ATO3Q12359 275 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 115.4 ms