RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	SCO1	P23833	295 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	PPA2	P28239	310 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	EHD3	P28817	500 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	SRP102	P36057	244 aa	Predicted RBP	2.98	□□□□□ -1.93
TPM1	YNL079C	RRF1	P38771	230 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	SMB1	P40018	196 aa	Known RBP	2.98	□□□□□ -1.93
TPM1	YNL079C	RFC4	P40339	323 aa	Known RBP	2.98	□□□□□ -1.93
TPM1	YNL079C	CAT5	P41735	233 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	CUP9	P41817	306 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	VHT1	P53241	593 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	ASI3	P53983	676 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	YDR249C	Q03787	373 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	UTP15	Q04305	513 aa	Known RBP	2.98	□□□□□ -1.93
TPM1	YNL079C	MRX8	Q05473	314 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	GAS2	Q06135	555 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	YPR147C	Q06522	304 aa	Known RBP	2.98	□□□□□ -1.93
TPM1	YNL079C	TMC1	Q08422	150 aa	Predicted RBP	2.98	□□□□□ -1.93
TPM1	YNL079C	YNG1	Q08465	219 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	CSF1	Q12150	2958 aa		2.98	□□□□□ -1.93
TPM1	YNL079C	BEM2	P39960	2167 aa	Known RBP	2.98	□□□□□ -1.93
TPM1	YNL079C	MSW1	P04803	379 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	RPL12A	P0CX53	165 aa	Known RBP	2.97	□□□□□ -1.93
TPM1	YNL079C	RPL12B	P0CX54	165 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	MATALPHA1	P0CY06	175 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	HMLALPHA1	P0CY07	175 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	STE18	P18852	110 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	DAL82	P21705	255 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	KRR1	P25586	316 aa	Predicted RBP	2.97	□□□□□ -1.93
TPM1	YNL079C	YKL063C	P35725	167 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	YER137C	P40083	148 aa	Known RBP	2.97	□□□□□ -1.93
TPM1	YNL079C	SYS1	P41544	203 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	FMP48	P53233	369 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	YLR152C	P54072	576 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	RPL6A	Q02326	176 aa	Known RBP	2.97	□□□□□ -1.93
TPM1	YNL079C	PET191	Q02772	108 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	MIM1	Q08176	113 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	SYC1	Q08553	188 aa	Predicted RBP	2.97	□□□□□ -1.93
TPM1	YNL079C	YOR376W	Q08900	122 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	BBP1	Q12365	385 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	RTR2	Q12378	196 aa		2.97	□□□□□ -1.93
TPM1	YNL079C	YAL064W-B	O13512	126 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	ARG80	P07249	177 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	NAM2	P11325	894 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	MSI1	P13712	422 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	CTA1	P15202	515 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	UTR1	P21373	530 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	MEK1	P24719	497 aa	Predicted RBP	2.96	□□□□□ -1.94
TPM1	YNL079C	CAM1	P29547	415 aa	Known RBP	2.96	□□□□□ -1.94
TPM1	YNL079C	SNC2	P33328	115 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	SSH1	P38353	490 aa	Known RBP	2.96	□□□□□ -1.94
TPM1	YNL079C	DLS1	P40366	167 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	SNX4	P47057	423 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	GPI14	P47088	403 aa	Known RBP	2.96	□□□□□ -1.94
TPM1	YNL079C	PGU1	P47180	361 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	YGR042W	P53227	271 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	GIM3	P53900	129 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	BUD25	P85052	153 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	CTF19	Q02732	369 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	YPL039W	Q03080	316 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	CGI121	Q03705	181 aa	Known RBP	2.96	□□□□□ -1.94
TPM1	YNL079C	VBA1	Q04301	562 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	NNT1	Q05874	261 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	MHR1	Q06630	226 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	HEM25	Q07534	307 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	YLR031W	Q07978	186 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	RDL2	Q08742	149 aa	Known RBP	2.96	□□□□□ -1.94
TPM1	YNL079C	YOR385W	Q08909	290 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	NIP7	Q08962	181 aa	Known RBP	2.96	□□□□□ -1.94
TPM1	YNL079C	AKR2	Q12013	749 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	HMS1	Q12398	434 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	RDI1	Q12434	202 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	IZH2	Q12442	317 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	FMP16	Q12497	93 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	FSH3	Q99369	266 aa		2.96	□□□□□ -1.94
TPM1	YNL079C	TDH2	P00358	332 aa	Known RBP	2.95	□□□□□ -1.94
TPM1	YNL079C	PRB1	P09232	635 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	YHR214C-D	P0CX93	97 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	URA6	P15700	204 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	CKS1	P20486	150 aa	Known RBP	2.95	□□□□□ -1.94
TPM1	YNL079C	HXT2	P23585	541 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	PET18	P25362	215 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	ACB1	P31787	87 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	COS9	P36034	407 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	MRPL4	P36517	319 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	FRM2	P37261	193 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
TPM1	YNL079C	VMA7	P39111	118 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	AVT7	P40501	490 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	TIR3	P40552	269 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	OTU1	P43558	301 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	LCB3	P47013	409 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	LSM1	P47017	172 aa	Known RBP	2.95	□□□□□ -1.94
TPM1	YNL079C	AIM24	P47127	394 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	BXI1	P48558	297 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	YIP5	P53108	310 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	AAH1	P53909	347 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	RVB1	Q03940	463 aa	Known RBP	2.95	□□□□□ -1.94
TPM1	YNL079C	CTS2	Q06350	511 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	GRE1	Q08969	168 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	ATG31	Q12421	196 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms