RNA–Protein interactions for RNA: YMR091C

NPL6, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene NPL6, Length 1,308 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL6	YMR091C	MIG1	P27705	504 aa		4.24	□□□□□ -1.73
NPL6	YMR091C	VPS51	P36116	164 aa		4.24	□□□□□ -1.73
NPL6	YMR091C	SKG1	P36169	355 aa		4.24	□□□□□ -1.73
NPL6	YMR091C	POG1	P40473	351 aa		4.24	□□□□□ -1.73
NPL6	YMR091C	ERG10	P41338	398 aa	Known RBP	4.24	□□□□□ -1.73
NPL6	YMR091C	YGR050C	P53231	118 aa		4.24	□□□□□ -1.73
NPL6	YMR091C	SSU72	P53538	206 aa	Predicted RBP	4.24	□□□□□ -1.73
NPL6	YMR091C	MAG1	P22134	296 aa	Known RBP	4.23	□□□□□ -1.73
NPL6	YMR091C	HMF1	P40037	129 aa	Known RBP	4.23	□□□□□ -1.73
NPL6	YMR091C	YOL160W	Q08321	113 aa		4.23	□□□□□ -1.73
NPL6	YMR091C	GRE1	Q08969	168 aa		4.23	□□□□□ -1.73
NPL6	YMR091C	AKR2	Q12013	749 aa		4.23	□□□□□ -1.73
NPL6	YMR091C	USB1	Q12208	290 aa	Known RBP	4.23	□□□□□ -1.73
NPL6	YMR091C	RPL9A	P05738	191 aa	Known RBP	4.22	□□□□□ -1.73
NPL6	YMR091C	NOP1	P15646	327 aa	Known RBP	4.22	□□□□□ -1.73
NPL6	YMR091C	RPL9B	P51401	191 aa	Known RBP	4.22	□□□□□ -1.73
NPL6	YMR091C	COG5	P53951	403 aa		4.22	□□□□□ -1.73
NPL6	YMR091C	IGO2	Q9P305	131 aa		4.22	□□□□□ -1.73
NPL6	YMR091C	YPR096C	O13587	100 aa		4.21	□□□□□ -1.73
NPL6	YMR091C	PUT1	P09368	476 aa		4.21	□□□□□ -1.73
NPL6	YMR091C	PDS1	P40316	373 aa	Predicted RBP	4.21	□□□□□ -1.73
NPL6	YMR091C	NOC4	Q06512	552 aa	Predicted RBP	4.21	□□□□□ -1.73
NPL6	YMR091C	YPL162C	Q12042	273 aa		4.21	□□□□□ -1.73
NPL6	YMR091C	PSF1	Q12488	208 aa		4.21	□□□□□ -1.73
NPL6	YMR091C	FKS1	P38631	1876 aa	Known RBP	4.21	□□□□□ -1.74
NPL6	YMR091C	CDC8	P00572	216 aa		4.21	□□□□□ -1.74
NPL6	YMR091C	SPO73	P40031	143 aa		4.21	□□□□□ -1.74
NPL6	YMR091C	CAB4	P53332	305 aa		4.21	□□□□□ -1.74
NPL6	YMR091C	SNO1	Q03144	224 aa		4.21	□□□□□ -1.74
NPL6	YMR091C	YLR036C	Q07986	203 aa		4.21	□□□□□ -1.74
NPL6	YMR091C	FAB1	P34756	2278 aa		4.2	□□□□□ -1.74
NPL6	YMR091C	SIR2	P06700	562 aa		4.2	□□□□□ -1.74
NPL6	YMR091C	YLR156W	P0CE96	114 aa		4.2	□□□□□ -1.74
NPL6	YMR091C	YLR159W	P0CE97	114 aa		4.2	□□□□□ -1.74
NPL6	YMR091C	YLR161W	P0CE98	114 aa		4.2	□□□□□ -1.74
NPL6	YMR091C	ARC19	P33204	171 aa	Known RBP	4.2	□□□□□ -1.74
NPL6	YMR091C	YHL026C	P38740	315 aa		4.2	□□□□□ -1.74
NPL6	YMR091C	YJL144W	P47009	104 aa		4.2	□□□□□ -1.74
NPL6	YMR091C	NRK1	P53915	240 aa		4.2	□□□□□ -1.74
NPL6	YMR091C	FUS2	Q05670	677 aa		4.2	□□□□□ -1.74
NPL6	YMR091C	IKI3	Q06706	1349 aa	Known RBP	4.19	□□□□□ -1.74
NPL6	YMR091C	RPL26A	P05743	127 aa	Known RBP	4.19	□□□□□ -1.74
NPL6	YMR091C	RPL35A	P0CX84	120 aa	Known RBP	4.19	□□□□□ -1.74
NPL6	YMR091C	RPL35B	P0CX85	120 aa	Known RBP	4.19	□□□□□ -1.74
NPL6	YMR091C	TAH1	P25638	111 aa	Predicted RBP	4.19	□□□□□ -1.74
NPL6	YMR091C	RME1	P32338	300 aa	Known RBP	4.19	□□□□□ -1.74
NPL6	YMR091C	SCM4	P32564	187 aa		4.19	□□□□□ -1.74
NPL6	YMR091C	SMD3	P43321	101 aa	Known RBP	4.19	□□□□□ -1.74
NPL6	YMR091C	RPL26B	P53221	127 aa	Known RBP	4.19	□□□□□ -1.74
NPL6	YMR091C	APJ1	P53940	528 aa		4.19	□□□□□ -1.74
NPL6	YMR091C	PRM15	Q03262	622 aa		4.19	□□□□□ -1.74
NPL6	YMR091C	GGA1	Q06336	557 aa		4.19	□□□□□ -1.74
NPL6	YMR091C	YOL024W	Q08172	172 aa		4.19	□□□□□ -1.74
NPL6	YMR091C	REP2	P03872	296 aa		4.18	□□□□□ -1.74
NPL6	YMR091C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
NPL6	YMR091C	GRX2	P17695	143 aa	Known RBP	4.18	□□□□□ -1.74
NPL6	YMR091C	TRR1	P29509	319 aa	Known RBP	4.18	□□□□□ -1.74
NPL6	YMR091C	UTP30	P36144	274 aa	Known RBP	4.18	□□□□□ -1.74
NPL6	YMR091C	SDH4	P37298	181 aa		4.18	□□□□□ -1.74
NPL6	YMR091C	CTR2	P38865	189 aa		4.18	□□□□□ -1.74
NPL6	YMR091C	SRP14	P38985	146 aa		4.18	□□□□□ -1.74
NPL6	YMR091C	YIP3	P53633	176 aa		4.18	□□□□□ -1.74
NPL6	YMR091C	ARO80	Q04052	950 aa		4.18	□□□□□ -1.74
NPL6	YMR091C	GRX8	Q05926	109 aa		4.18	□□□□□ -1.74
NPL6	YMR091C	MSW1	P04803	379 aa		4.17	□□□□□ -1.74
NPL6	YMR091C	SEC17	P32602	292 aa		4.17	□□□□□ -1.74
NPL6	YMR091C	SNX4	P47057	423 aa		4.17	□□□□□ -1.74
NPL6	YMR091C	DSK2	P48510	373 aa		4.17	□□□□□ -1.74
NPL6	YMR091C	BET1	P22804	142 aa		4.16	□□□□□ -1.74
NPL6	YMR091C	TRX3	P25372	127 aa		4.16	□□□□□ -1.74
NPL6	YMR091C	GLE2	P40066	365 aa		4.16	□□□□□ -1.74
NPL6	YMR091C	MRPL49	P40858	161 aa	Predicted RBP	4.16	□□□□□ -1.74
NPL6	YMR091C	YNL184C	P53876	108 aa		4.16	□□□□□ -1.74
NPL6	YMR091C	TRM12	Q04235	462 aa		4.16	□□□□□ -1.74
NPL6	YMR091C	MHT1	Q12525	324 aa		4.16	□□□□□ -1.74
NPL6	YMR091C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.16	□□□□□ -1.74
NPL6	YMR091C	YFR032C-B	Q8TGU2	87 aa		4.16	□□□□□ -1.74
NPL6	YMR091C	YDR249C	Q03787	373 aa		4.15	□□□□□ -1.75
NPL6	YMR091C	SMD2	Q06217	110 aa	Known RBP	4.15	□□□□□ -1.75
NPL6	YMR091C	RDS3	Q06835	107 aa	Predicted RBP	4.15	□□□□□ -1.75
NPL6	YMR091C	SNF4	P12904	322 aa		4.14	□□□□□ -1.75
NPL6	YMR091C	URA5	P13298	226 aa	Known RBP	4.14	□□□□□ -1.75
NPL6	YMR091C	MNN5	P46982	586 aa		4.14	□□□□□ -1.75
NPL6	YMR091C	MCP1	Q12106	302 aa		4.14	□□□□□ -1.75
NPL6	YMR091C	MBF1	O14467	151 aa	Known RBP	4.13	□□□□□ -1.75
NPL6	YMR091C	AIF1	P52923	378 aa		4.13	□□□□□ -1.75
NPL6	YMR091C	SLM2	P53955	656 aa		4.13	□□□□□ -1.75
NPL6	YMR091C	SWP1	Q02795	286 aa		4.13	□□□□□ -1.75
NPL6	YMR091C	SUE1	Q06524	206 aa		4.13	□□□□□ -1.75
NPL6	YMR091C	ARR2	Q06597	130 aa		4.13	□□□□□ -1.75
NPL6	YMR091C	RIO1	Q12196	484 aa	Known RBP	4.13	□□□□□ -1.75
NPL6	YMR091C	TSC3	Q3E790	80 aa		4.13	□□□□□ -1.75
NPL6	YMR091C	YIL177C	P40434	1758 aa		4.12	□□□□□ -1.75
NPL6	YMR091C	YJL225C	P40889	1758 aa		4.12	□□□□□ -1.75
NPL6	YMR091C	RPB3	P16370	318 aa	Known RBP	4.12	□□□□□ -1.75
NPL6	YMR091C	CKS1	P20486	150 aa	Known RBP	4.12	□□□□□ -1.75
NPL6	YMR091C	SCO1	P23833	295 aa		4.12	□□□□□ -1.75
NPL6	YMR091C	CNB1	P25296	175 aa		4.12	□□□□□ -1.75
NPL6	YMR091C	MED6	P38782	295 aa		4.12	□□□□□ -1.75
NPL6	YMR091C	YJR146W	P47174	117 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 37 ms