RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C MNS1P32906 549 aa7.79□□□□□ -1.16
SEC61YLR378C YOX1P34161 385 aa7.79□□□□□ -1.16
SEC61YLR378C PRS3P38689 320 aaKnown RBP7.79□□□□□ -1.16
SEC61YLR378C MRL1Q06815 381 aa7.79□□□□□ -1.16
SEC61YLR378C ALG6Q12001 544 aaKnown RBP7.79□□□□□ -1.16
SEC61YLR378C YOR192C-CQ3E736 78 aa7.79□□□□□ -1.16
SEC61YLR378C HUG1Q6Q5K6 68 aa7.79□□□□□ -1.16
SEC61YLR378C COQ2P32378 372 aa7.78□□□□□ -1.16
SEC61YLR378C RPD3P32561 433 aa7.78□□□□□ -1.16
SEC61YLR378C EMP24P32803 203 aaKnown RBP7.78□□□□□ -1.16
SEC61YLR378C SRY1P36007 326 aa7.78□□□□□ -1.16
SEC61YLR378C RMD6P39975 231 aa7.78□□□□□ -1.16
SEC61YLR378C TOK1P40310 691 aa7.78□□□□□ -1.16
SEC61YLR378C GLR1P41921 483 aaKnown RBP7.78□□□□□ -1.16
SEC61YLR378C BUL1P48524 976 aa7.78□□□□□ -1.16
SEC61YLR378C MRPL22P53881 309 aa7.78□□□□□ -1.16
SEC61YLR378C HSK3P69852 69 aa7.78□□□□□ -1.16
SEC61YLR378C API2Q04413 109 aa7.78□□□□□ -1.16
SEC61YLR378C RIM9Q04734 239 aa7.78□□□□□ -1.16
SEC61YLR378C ERP1Q05359 219 aaKnown RBP7.78□□□□□ -1.16
SEC61YLR378C BER1Q06688 274 aaKnown RBP7.78□□□□□ -1.16
SEC61YLR378C SWT1Q12104 458 aa7.78□□□□□ -1.16
SEC61YLR378C YLR108CQ12259 485 aa7.78□□□□□ -1.16
SEC61YLR378C DGK1Q12382 290 aa7.78□□□□□ -1.16
SEC61YLR378C ERG2P32352 222 aa7.78□□□□□ -1.16
SEC61YLR378C YEA6P39953 335 aa7.78□□□□□ -1.16
SEC61YLR378C YGL117WP53133 265 aa7.78□□□□□ -1.16
SEC61YLR378C SKO1Q02100 647 aa7.78□□□□□ -1.16
SEC61YLR378C YDR415CQ04033 374 aaPredicted RBP7.78□□□□□ -1.16
SEC61YLR378C PAM18Q07914 168 aa7.78□□□□□ -1.16
SEC61YLR378C YOR292CQ08743 309 aa7.78□□□□□ -1.16
SEC61YLR378C AGX1P43567 385 aa7.77□□□□□ -1.17
SEC61YLR378C GON7P46984 123 aa7.77□□□□□ -1.17
SEC61YLR378C YJR012CP47087 207 aa7.77□□□□□ -1.17
SEC61YLR378C YIF1P53845 314 aaKnown RBP7.77□□□□□ -1.17
SEC61YLR378C ISU1Q03020 165 aa7.77□□□□□ -1.17
SEC61YLR378C YMR279CQ03263 540 aa7.77□□□□□ -1.17
SEC61YLR378C YFH1Q07540 174 aa7.77□□□□□ -1.17
SEC61YLR378C UBI4P0CG63 381 aaKnown RBP7.76□□□□□ -1.17
SEC61YLR378C ECM25P32525 599 aa7.76□□□□□ -1.17
SEC61YLR378C YKL107WP34251 309 aa7.76□□□□□ -1.17
SEC61YLR378C ECM31P38122 312 aa7.76□□□□□ -1.17
SEC61YLR378C PHO23P50947 330 aa7.76□□□□□ -1.17
SEC61YLR378C GAT3Q07928 141 aa7.76□□□□□ -1.17
SEC61YLR378C ATP14Q12349 124 aa7.76□□□□□ -1.17
SEC61YLR378C LSB5P25369 354 aa7.75□□□□□ -1.17
SEC61YLR378C YGP1P38616 354 aaKnown RBP7.75□□□□□ -1.17
SEC61YLR378C PCL7P40186 285 aa7.75□□□□□ -1.17
SEC61YLR378C HED1Q03937 162 aa7.75□□□□□ -1.17
SEC61YLR378C ECM18Q04623 453 aa7.75□□□□□ -1.17
SEC61YLR378C ASM4Q05166 528 aa7.75□□□□□ -1.17
SEC61YLR378C HRD1Q08109 551 aa7.75□□□□□ -1.17
SEC61YLR378C YOL118CQ08259 102 aa7.75□□□□□ -1.17
SEC61YLR378C RFM1Q12192 310 aa7.75□□□□□ -1.17
SEC61YLR378C ZRC1P20107 442 aa7.74□□□□□ -1.17
SEC61YLR378C YER121WP40076 114 aa7.74□□□□□ -1.17
SEC61YLR378C EMC5P40540 141 aa7.74□□□□□ -1.17
SEC61YLR378C XPT1P47165 209 aa7.74□□□□□ -1.17
SEC61YLR378C SED1Q01589 338 aa7.74□□□□□ -1.17
SEC61YLR378C EST3Q03096 181 aa7.74□□□□□ -1.17
SEC61YLR378C CAC2Q04199 468 aa7.74□□□□□ -1.17
SEC61YLR378C YMR090WQ04304 227 aaKnown RBP7.74□□□□□ -1.17
SEC61YLR378C YDR114CQ04597 100 aa7.74□□□□□ -1.17
SEC61YLR378C YBR056W-AI2HB52 66 aa7.73□□□□□ -1.17
SEC61YLR378C RPL39P04650 51 aa7.73□□□□□ -1.17
SEC61YLR378C GDH1P07262 454 aaKnown RBP7.73□□□□□ -1.17
SEC61YLR378C SHM2P37291 469 aaKnown RBP7.73□□□□□ -1.17
SEC61YLR378C YEA4P40004 342 aa7.73□□□□□ -1.17
SEC61YLR378C AIR1P40507 360 aaKnown RBP7.73□□□□□ -1.17
SEC61YLR378C BNA2P47125 453 aa7.73□□□□□ -1.17
SEC61YLR378C MSO1P53604 210 aaKnown RBP7.73□□□□□ -1.17
SEC61YLR378C CWC25P53854 179 aaKnown RBP7.73□□□□□ -1.17
SEC61YLR378C YNL046WP53956 172 aa7.73□□□□□ -1.17
SEC61YLR378C GMC1Q04399 608 aa7.73□□□□□ -1.17
SEC61YLR378C WTM2Q12206 467 aa7.73□□□□□ -1.17
SEC61YLR378C DAL80P26343 269 aa7.72□□□□□ -1.17
SEC61YLR378C ISC10P32645 267 aa7.72□□□□□ -1.17
SEC61YLR378C CPR5P35176 225 aa7.72□□□□□ -1.17
SEC61YLR378C SLM6P38343 150 aa7.72□□□□□ -1.17
SEC61YLR378C IKI1P38874 309 aa7.72□□□□□ -1.17
SEC61YLR378C INN1P53901 409 aa7.72□□□□□ -1.17
SEC61YLR378C YTH1Q06102 208 aaPredicted RBP7.72□□□□□ -1.17
SEC61YLR378C AIM45Q12480 344 aaKnown RBP7.72□□□□□ -1.17
SEC61YLR378C AGC1Q12482 902 aa7.72□□□□□ -1.17
SEC61YLR378C ERV1P27882 189 aa7.71□□□□□ -1.17
SEC61YLR378C SPC29P33419 253 aa7.71□□□□□ -1.17
SEC61YLR378C YKL162CP36052 402 aa7.71□□□□□ -1.17
SEC61YLR378C SHG1P38337 142 aa7.71□□□□□ -1.17
SEC61YLR378C ECM14P38836 430 aa7.71□□□□□ -1.17
SEC61YLR378C YHR138CP38841 114 aaPredicted RBP7.71□□□□□ -1.17
SEC61YLR378C TTI2P47168 421 aa7.71□□□□□ -1.17
SEC61YLR378C SNN1P48232 102 aa7.71□□□□□ -1.17
SEC61YLR378C YCL001W-AP87012 153 aa7.71□□□□□ -1.17
SEC61YLR378C RPL21AQ02753 160 aaKnown RBP7.71□□□□□ -1.17
SEC61YLR378C MRPS17Q03246 237 aaPredicted RBP7.71□□□□□ -1.17
SEC61YLR378C LPP1Q04396 274 aa7.71□□□□□ -1.17
SEC61YLR378C RPL21BQ12672 160 aaKnown RBP7.71□□□□□ -1.17
SEC61YLR378C YHR213W-AQ8TGT4 77 aa7.71□□□□□ -1.17
SEC61YLR378C GAR1P28007 205 aaKnown RBP7.7□□□□□ -1.18
SEC61YLR378C SRB6P32570 121 aa7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms