RNA–Protein interactions for RNA: YLR048W

RPS0B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS0B, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS0B	YLR048W	COS8	P38723	381 aa		3.6	□□□□□ -1.83
RPS0B	YLR048W	LSM4	P40070	187 aa	Known RBP	3.6	□□□□□ -1.83
RPS0B	YLR048W	FMP32	P43557	207 aa		3.6	□□□□□ -1.83
RPS0B	YLR048W	YFH7	P43591	353 aa		3.6	□□□□□ -1.83
RPS0B	YLR048W	LSM1	P47017	172 aa	Known RBP	3.6	□□□□□ -1.83
RPS0B	YLR048W	YNL010W	P53981	241 aa	Known RBP	3.6	□□□□□ -1.83
RPS0B	YLR048W	BRX1	Q08235	291 aa	Known RBP	3.6	□□□□□ -1.83
RPS0B	YLR048W	BBP1	Q12365	385 aa		3.6	□□□□□ -1.83
RPS0B	YLR048W	GEP5	Q12393	293 aa		3.6	□□□□□ -1.83
RPS0B	YLR048W	NOT5	Q12514	560 aa	Predicted RBP	3.6	□□□□□ -1.83
RPS0B	YLR048W	PET20	Q99373	253 aa		3.6	□□□□□ -1.83
RPS0B	YLR048W	YCR090C	P25654	182 aa	Known RBP	3.59	□□□□□ -1.83
RPS0B	YLR048W	SRP102	P36057	244 aa	Predicted RBP	3.59	□□□□□ -1.83
RPS0B	YLR048W	NVJ1	P38881	321 aa		3.59	□□□□□ -1.83
RPS0B	YLR048W	EDC3	P39998	551 aa	Known RBP	3.59	□□□□□ -1.83
RPS0B	YLR048W	FIS1	P40515	155 aa		3.59	□□□□□ -1.83
RPS0B	YLR048W	SBH2	P52871	88 aa		3.59	□□□□□ -1.83
RPS0B	YLR048W	ALG9	P53868	555 aa	Known RBP	3.59	□□□□□ -1.83
RPS0B	YLR048W	TSA2	Q04120	196 aa		3.59	□□□□□ -1.83
RPS0B	YLR048W	PIN3	Q06449	215 aa		3.59	□□□□□ -1.83
RPS0B	YLR048W	RIO1	Q12196	484 aa	Known RBP	3.59	□□□□□ -1.83
RPS0B	YLR048W	YPR170W-B	P0C5R9	85 aa		3.58	□□□□□ -1.84
RPS0B	YLR048W	RPS24A	P0CX31	135 aa	Known RBP	3.58	□□□□□ -1.84
RPS0B	YLR048W	RPS24B	P0CX32	135 aa	Known RBP	3.58	□□□□□ -1.84
RPS0B	YLR048W	CNB1	P25296	175 aa		3.58	□□□□□ -1.84
RPS0B	YLR048W	YAR068W	P39564	161 aa		3.58	□□□□□ -1.84
RPS0B	YLR048W	AST2	P39945	430 aa	Known RBP	3.58	□□□□□ -1.84
RPS0B	YLR048W	PRE5	P40302	234 aa	Known RBP	3.58	□□□□□ -1.84
RPS0B	YLR048W	YFL012W	P43580	148 aa		3.58	□□□□□ -1.84
RPS0B	YLR048W	YFR045W	P43617	309 aa		3.58	□□□□□ -1.84
RPS0B	YLR048W	MIG2	P53035	382 aa		3.58	□□□□□ -1.84
RPS0B	YLR048W	GAS3	Q03655	524 aa		3.58	□□□□□ -1.84
RPS0B	YLR048W	PEX11	Q12462	236 aa		3.58	□□□□□ -1.84
RPS0B	YLR048W	MBF1	O14467	151 aa	Known RBP	3.57	□□□□□ -1.84
RPS0B	YLR048W	CMD1	P06787	147 aa	Known RBP	3.57	□□□□□ -1.84
RPS0B	YLR048W	SGA1	P08019	549 aa		3.57	□□□□□ -1.84
RPS0B	YLR048W	SEC14	P24280	304 aa	Known RBP	3.57	□□□□□ -1.84
RPS0B	YLR048W	ATG22	P25568	528 aa		3.57	□□□□□ -1.84
RPS0B	YLR048W	AHC2	P25649	128 aa		3.57	□□□□□ -1.84
RPS0B	YLR048W	UTH1	P36135	365 aa		3.57	□□□□□ -1.84
RPS0B	YLR048W	GLE2	P40066	365 aa		3.57	□□□□□ -1.84
RPS0B	YLR048W	HST4	P53688	370 aa		3.57	□□□□□ -1.84
RPS0B	YLR048W	FCF1	Q05498	189 aa	Predicted RBP	3.57	□□□□□ -1.84
RPS0B	YLR048W	SUE1	Q06524	206 aa		3.57	□□□□□ -1.84
RPS0B	YLR048W	RDI1	Q12434	202 aa		3.57	□□□□□ -1.84
RPS0B	YLR048W	ADH3	P07246	375 aa	Known RBP	3.56	□□□□□ -1.84
RPS0B	YLR048W	POP4	P38336	279 aa		3.56	□□□□□ -1.84
RPS0B	YLR048W	YGP1	P38616	354 aa	Known RBP	3.56	□□□□□ -1.84
RPS0B	YLR048W	RSM25	P40496	264 aa		3.56	□□□□□ -1.84
RPS0B	YLR048W	OST2	P46964	130 aa		3.56	□□□□□ -1.84
RPS0B	YLR048W	AIM34	Q03673	198 aa		3.56	□□□□□ -1.84
RPS0B	YLR048W	PLP1	Q04004	230 aa		3.56	□□□□□ -1.84
RPS0B	YLR048W	YPL162C	Q12042	273 aa		3.56	□□□□□ -1.84
RPS0B	YLR048W	SCO1	P23833	295 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	SEC17	P32602	292 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	KDX1	P36005	433 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	UTP30	P36144	274 aa	Known RBP	3.55	□□□□□ -1.84
RPS0B	YLR048W	SKG1	P36169	355 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	SNM1	P40993	198 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	COS6	P53344	381 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	YDC1	Q02896	317 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	RSM10	Q03201	203 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	HPT1	Q04178	221 aa	Known RBP	3.55	□□□□□ -1.84
RPS0B	YLR048W	ATG39	Q06159	398 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	SHH4	Q06236	168 aa		3.55	□□□□□ -1.84
RPS0B	YLR048W	RAD10	P06838	210 aa		3.54	□□□□□ -1.84
RPS0B	YLR048W	MRPS9	P38120	278 aa		3.54	□□□□□ -1.84
RPS0B	YLR048W	PFS2	P42841	465 aa	Known RBP	3.54	□□□□□ -1.84
RPS0B	YLR048W	ARO8	P53090	500 aa	Known RBP	3.54	□□□□□ -1.84
RPS0B	YLR048W	NQM1	P53228	333 aa	Predicted RBP	3.54	□□□□□ -1.84
RPS0B	YLR048W	MAK3	Q03503	176 aa		3.54	□□□□□ -1.84
RPS0B	YLR048W	DYN3	Q04949	312 aa		3.54	□□□□□ -1.84
RPS0B	YLR048W	YFR032C-B	Q8TGU2	87 aa		3.54	□□□□□ -1.84
RPS0B	YLR048W	YHR125W	P38831	101 aa		3.53	□□□□□ -1.84
RPS0B	YLR048W	SOK1	P40317	901 aa		3.53	□□□□□ -1.84
RPS0B	YLR048W	ECO1	P43605	281 aa		3.53	□□□□□ -1.84
RPS0B	YLR048W	ARP3	P47117	449 aa	Known RBP	3.53	□□□□□ -1.84
RPS0B	YLR048W	YDR249C	Q03787	373 aa		3.53	□□□□□ -1.84
RPS0B	YLR048W	HNT1	Q04344	158 aa	Known RBP	3.53	□□□□□ -1.84
RPS0B	YLR048W	YLR031W	Q07978	186 aa		3.53	□□□□□ -1.84
RPS0B	YLR048W	MHT1	Q12525	324 aa		3.53	□□□□□ -1.84
RPS0B	YLR048W	YLR156W	P0CE96	114 aa		3.52	□□□□□ -1.85
RPS0B	YLR048W	YLR159W	P0CE97	114 aa		3.52	□□□□□ -1.85
RPS0B	YLR048W	YLR161W	P0CE98	114 aa		3.52	□□□□□ -1.85
RPS0B	YLR048W	PET9	P18239	318 aa	Known RBP	3.52	□□□□□ -1.85
RPS0B	YLR048W	ICE2	P40499	491 aa		3.52	□□□□□ -1.85
RPS0B	YLR048W	ARC15	P40518	154 aa	RIP-Chip data	3.52	□□□□□ -1.85	not detected
RPS0B	YLR048W	HSK3	P69852	69 aa		3.52	□□□□□ -1.85
RPS0B	YLR048W	GPI17	Q04080	534 aa		3.52	□□□□□ -1.85
RPS0B	YLR048W	SPC2	Q04969	178 aa		3.52	□□□□□ -1.85
RPS0B	YLR048W	YPR127W	Q06494	345 aa		3.52	□□□□□ -1.85
RPS0B	YLR048W	HIS3	P06633	220 aa		3.51	□□□□□ -1.85
RPS0B	YLR048W	RPB3	P16370	318 aa	Known RBP	3.51	□□□□□ -1.85
RPS0B	YLR048W	BET1	P22804	142 aa		3.51	□□□□□ -1.85
RPS0B	YLR048W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
RPS0B	YLR048W	TKL2	P33315	681 aa		3.51	□□□□□ -1.85
RPS0B	YLR048W	YKL102C	P34249	101 aa		3.51	□□□□□ -1.85
RPS0B	YLR048W	TVP38	P36164	337 aa		3.51	□□□□□ -1.85
RPS0B	YLR048W	GON7	P46984	123 aa		3.51	□□□□□ -1.85
RPS0B	YLR048W	MOG1	P47123	218 aa		3.51	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms