RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	YPR195C	Q06594	109 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	SDO1	Q07953	250 aa	Known RBP	0.65	□□□□□ -2.31
PRP16	YKR086W	RNH203	Q12338	110 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	PRP46	Q12417	451 aa	Predicted RBP	0.65	□□□□□ -2.31
PRP16	YKR086W	SNF8	Q12483	233 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	EFG1	Q3E705	233 aa	Known RBP	0.65	□□□□□ -2.31
PRP16	YKR086W	IRA2	P19158	3079 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	CMD1	P06787	147 aa	Known RBP	0.65	□□□□□ -2.31
PRP16	YKR086W	FUN26	P31381	517 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	TCA17	P32613	152 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.65	□□□□□ -2.31	not detected
PRP16	YKR086W	YFR035C	P43608	114 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	CIN2	P46670	268 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	BXI1	P48558	297 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	LST7	P53237	242 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	YNL046W	P53956	172 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	DIA1	P54005	336 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	SNO1	Q03144	224 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	SDC1	Q03323	175 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	YHP1	Q04116	353 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	ATG39	Q06159	398 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	YDL211C	Q12121	372 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	YOR342C	Q12182	319 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	TIR4	Q12218	487 aa	Predicted RBP	0.65	□□□□□ -2.31
PRP16	YKR086W	YPS3	Q12303	508 aa		0.65	□□□□□ -2.31
PRP16	YKR086W	RAS2	P01120	322 aa	Known RBP	0.64	□□□□□ -2.31
PRP16	YKR086W	TPM1	P17536	199 aa	Known RBP	0.64	□□□□□ -2.31
PRP16	YKR086W	YMR31	P19955	123 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	MXR2	P25566	168 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	RCN1	P36054	211 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	FRM2	P37261	193 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	AVT6	P40074	448 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	NAS6	P50086	228 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	MMS2	P53152	137 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	CDC14	Q00684	551 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	URC2	Q04411	772 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	YOL019W	Q08157	551 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	VAM10	Q08474	114 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	UAF30	Q08747	228 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	APC9	Q12107	265 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	YPR011C	Q12251	326 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	SFG1	Q12507	346 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	ADF1	Q2V2Q1	113 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.64	□□□□□ -2.31	not detected
PRP16	YKR086W	PUT1	P09368	476 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	BMH1	P29311	267 aa	Known RBP	0.64	□□□□□ -2.31
PRP16	YKR086W	TAE1	P38340	232 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	SHQ1	P40486	507 aa	Predicted RBP	0.64	□□□□□ -2.31
PRP16	YKR086W	RPA43	P46669	326 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	SPG1	P50088	95 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	VHT1	P53241	593 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	PIR1	Q03178	341 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	GAS3	Q03655	524 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	AIM34	Q03673	198 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	CDC123	Q05791	360 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	MRX9	Q07349	420 aa	Known RBP	0.64	□□□□□ -2.31
PRP16	YKR086W	ATG31	Q12421	196 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	BOL1	Q3E793	110 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	TEL1	P38110	2787 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	CLG1	P35190	452 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	SHG1	P38337	142 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	RSM25	P40496	264 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	AIM25	P47140	327 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	YGR026W	P53217	278 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	YGR067C	P53243	804 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	PRO2	P54885	456 aa	Known RBP	0.64	□□□□□ -2.31
PRP16	YKR086W	GRX3	Q03835	250 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	GET4	Q12125	312 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	YHR214C-E	Q8TGK0	99 aa		0.64	□□□□□ -2.31
PRP16	YKR086W	TDH2	P00358	332 aa	Known RBP	0.63	□□□□□ -2.31
PRP16	YKR086W	ROX3	P25046	220 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	MCH2	P36032	473 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	MRPL28	P36527	147 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	LSM12	P38828	187 aa	Known RBP	0.63	□□□□□ -2.31
PRP16	YKR086W	RPC17	P47076	161 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	SDS23	P53172	527 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	DBP6	P53734	629 aa	Known RBP	0.63	□□□□□ -2.31
PRP16	YKR086W	OSH6	Q02201	448 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	MIX17	Q03667	156 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	YDR248C	Q03786	193 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	ARO80	Q04052	950 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	FAR10	Q06001	478 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	YET3	Q07451	203 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	BRR2	P32639	2163 aa	Known RBP	0.63	□□□□□ -2.31
PRP16	YKR086W	YKR041W	P36134	250 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	SDH4	P37298	181 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	ADH5	P38113	351 aa	Known RBP	0.63	□□□□□ -2.31
PRP16	YKR086W	SMP1	P38128	452 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	YBR096W	P38256	230 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	COA1	P40452	197 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	CUP9	P41817	306 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	YJR015W	P47090	510 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	SYF2	P53277	215 aa	Predicted RBP	0.63	□□□□□ -2.31
PRP16	YKR086W	TIM11	P81449	96 aa	Predicted RBP	0.63	□□□□□ -2.31
PRP16	YKR086W	YMR279C	Q03263	540 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	PEX12	Q04370	399 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	KAP95	Q06142	861 aa	Known RBP	0.63	□□□□□ -2.31
PRP16	YKR086W	YOL014W	Q08110	124 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	PSY3	Q12318	242 aa		0.63	□□□□□ -2.31
PRP16	YKR086W	GTT2	Q12390	233 aa		0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms