RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W TMA20P89886 181 aaPredicted RBP1.91□□□□□ -2.1
NUP100YKL068W SWP1Q02795 286 aa1.91□□□□□ -2.1
NUP100YKL068W YMR181CQ03231 154 aa1.91□□□□□ -2.1
NUP100YKL068W YLR030WQ07967 263 aa1.91□□□□□ -2.1
NUP100YKL068W HRT3Q12347 344 aa1.91□□□□□ -2.1
NUP100YKL068W POL2P21951 2222 aaKnown RBP1.91□□□□□ -2.1
NUP100YKL068W YBR056W-AI2HB52 66 aa1.91□□□□□ -2.1
NUP100YKL068W YMR316C-AI2HB70 103 aa1.91□□□□□ -2.1
NUP100YKL068W CMD1P06787 147 aaKnown RBP1.91□□□□□ -2.1
NUP100YKL068W MIR1P23641 311 aaKnown RBP1.91□□□□□ -2.1
NUP100YKL068W IPI1P38803 334 aaPredicted RBP1.91□□□□□ -2.1
NUP100YKL068W LSM4P40070 187 aaKnown RBP1.91□□□□□ -2.1
NUP100YKL068W PCI8P40512 444 aa1.91□□□□□ -2.1
NUP100YKL068W YIL067CP40514 678 aa1.91□□□□□ -2.1
NUP100YKL068W PRM8P53174 237 aa1.91□□□□□ -2.1
NUP100YKL068W YNL184CP53876 108 aa1.91□□□□□ -2.1
NUP100YKL068W FMP41P53889 259 aaKnown RBP1.91□□□□□ -2.1
NUP100YKL068W RMI1Q02685 241 aa1.91□□□□□ -2.1
NUP100YKL068W ELP3Q02908 557 aaKnown RBP1.91□□□□□ -2.1
NUP100YKL068W AKR2Q12013 749 aa1.91□□□□□ -2.1
NUP100YKL068W EFG1Q3E705 233 aaKnown RBP1.91□□□□□ -2.1
NUP100YKL068W YLR422WQ06409 1932 aa1.91□□□□□ -2.1
NUP100YKL068W CDC50P25656 391 aa1.9□□□□□ -2.1
NUP100YKL068W TRS65P32893 560 aa1.9□□□□□ -2.1
NUP100YKL068W MBA1P38300 278 aa1.9□□□□□ -2.1
NUP100YKL068W CHL4P38907 458 aa1.9□□□□□ -2.1
NUP100YKL068W YJR015WP47090 510 aa1.9□□□□□ -2.1
NUP100YKL068W UBC12P52491 188 aa1.9□□□□□ -2.1
NUP100YKL068W SDC1Q03323 175 aa1.9□□□□□ -2.1
NUP100YKL068W YDR249CQ03787 373 aa1.9□□□□□ -2.1
NUP100YKL068W YHC1Q05900 231 aaKnown RBP1.9□□□□□ -2.1
NUP100YKL068W TRM10Q12400 293 aa1.9□□□□□ -2.1
NUP100YKL068W HTZ1Q12692 134 aaKnown RBP1.9□□□□□ -2.1
NUP100YKL068W YHR139C-AO13536 103 aa1.9□□□□□ -2.11
NUP100YKL068W RPS18AP0CX55 146 aaKnown RBP1.9□□□□□ -2.11
NUP100YKL068W RPS18BP0CX56 146 aaPredicted RBP1.9□□□□□ -2.11
NUP100YKL068W FCY2P17064 533 aa1.9□□□□□ -2.11
NUP100YKL068W CDC43P18898 376 aa1.9□□□□□ -2.11
NUP100YKL068W OCH1P31755 480 aa1.9□□□□□ -2.11
NUP100YKL068W SCO2P38072 301 aa1.9□□□□□ -2.11
NUP100YKL068W DOG2P38773 246 aa1.9□□□□□ -2.11
NUP100YKL068W DOG1P38774 246 aa1.9□□□□□ -2.11
NUP100YKL068W RMD6P39975 231 aa1.9□□□□□ -2.11
NUP100YKL068W YER186CP40101 306 aa1.9□□□□□ -2.11
NUP100YKL068W PEX17P40155 199 aa1.9□□□□□ -2.11
NUP100YKL068W YJL213WP40896 331 aa1.9□□□□□ -2.11
NUP100YKL068W IMP4P53941 290 aaKnown RBP1.9□□□□□ -2.11
NUP100YKL068W YNL046WP53956 172 aa1.9□□□□□ -2.11
NUP100YKL068W TIM44Q01852 431 aa1.9□□□□□ -2.11
NUP100YKL068W PAL1Q05518 499 aaKnown RBP1.9□□□□□ -2.11
NUP100YKL068W HRI1Q05905 244 aaKnown RBP1.9□□□□□ -2.11
NUP100YKL068W DTD1Q07648 150 aaKnown RBP1.9□□□□□ -2.11
NUP100YKL068W YOR292CQ08743 309 aa1.9□□□□□ -2.11
NUP100YKL068W FDH1Q08911 376 aa1.9□□□□□ -2.11
NUP100YKL068W MDM32Q12171 622 aa1.9□□□□□ -2.11
NUP100YKL068W CYC3P06182 269 aa1.89□□□□□ -2.11
NUP100YKL068W MRPS28P21771 286 aa1.89□□□□□ -2.11
NUP100YKL068W ERG24P32462 438 aaKnown RBP1.89□□□□□ -2.11
NUP100YKL068W PTM1P32857 523 aa1.89□□□□□ -2.11
NUP100YKL068W RPS1AP33442 255 aaKnown RBP1.89□□□□□ -2.11
NUP100YKL068W APS1P35181 156 aa1.89□□□□□ -2.11
NUP100YKL068W OAR1P35731 278 aa1.89□□□□□ -2.11
NUP100YKL068W HOT13P36078 116 aa1.89□□□□□ -2.11
NUP100YKL068W YHL026CP38740 315 aa1.89□□□□□ -2.11
NUP100YKL068W NCA3P46955 337 aa1.89□□□□□ -2.11
NUP100YKL068W ALB1P47019 175 aaPredicted RBP1.89□□□□□ -2.11
NUP100YKL068W COQ5P49017 307 aa1.89□□□□□ -2.11
NUP100YKL068W YGL034CP53186 121 aa1.89□□□□□ -2.11
NUP100YKL068W FAR10Q06001 478 aa1.89□□□□□ -2.11
NUP100YKL068W OSW1Q08692 278 aa1.89□□□□□ -2.11
NUP100YKL068W RRG7Q08774 242 aaPredicted RBP1.89□□□□□ -2.11
NUP100YKL068W PEX34P25584 144 aa1.89□□□□□ -2.11
NUP100YKL068W FUN26P31381 517 aa1.89□□□□□ -2.11
NUP100YKL068W PRY2P36110 329 aa1.89□□□□□ -2.11
NUP100YKL068W NAT2P37293 288 aa1.89□□□□□ -2.11
NUP100YKL068W YBR285WP38354 144 aa1.89□□□□□ -2.11
NUP100YKL068W TRR2P38816 342 aa1.89□□□□□ -2.11
NUP100YKL068W YDR476CQ03362 224 aa1.89□□□□□ -2.11
NUP100YKL068W PKR1Q03880 122 aaKnown RBP1.89□□□□□ -2.11
NUP100YKL068W YOR186WQ08560 144 aa1.89□□□□□ -2.11
NUP100YKL068W ATP16Q12165 160 aa1.89□□□□□ -2.11
NUP100YKL068W MHT1Q12525 324 aa1.89□□□□□ -2.11
NUP100YKL068W WIP1Q2V2P8 89 aa1.89□□□□□ -2.11
NUP100YKL068W MRS3P10566 314 aa1.88□□□□□ -2.11
NUP100YKL068W ATG22P25568 528 aa1.88□□□□□ -2.11
NUP100YKL068W SUA7P29055 345 aaPredicted RBP1.88□□□□□ -2.11
NUP100YKL068W URA10P30402 227 aa1.88□□□□□ -2.11
NUP100YKL068W ATS1P31386 333 aa1.88□□□□□ -2.11
NUP100YKL068W GSP1P32835 219 aaKnown RBP1.88□□□□□ -2.11
NUP100YKL068W GSP2P32836 220 aaKnown RBP1.88□□□□□ -2.11
NUP100YKL068W PMU1P36069 295 aa1.88□□□□□ -2.11
NUP100YKL068W ARN2P38724 620 aa1.88□□□□□ -2.11
NUP100YKL068W EFM1P38732 585 aa1.88□□□□□ -2.11
NUP100YKL068W UFE1P41834 346 aa1.88□□□□□ -2.11
NUP100YKL068W UBC7Q02159 165 aa1.88□□□□□ -2.11
NUP100YKL068W YPL113CQ02961 396 aa1.88□□□□□ -2.11
NUP100YKL068W MRX11Q03079 207 aa1.88□□□□□ -2.11
NUP100YKL068W YMD8Q03697 442 aa1.88□□□□□ -2.11
NUP100YKL068W LIP2Q06005 328 aa1.88□□□□□ -2.11
NUP100YKL068W NEJ1Q06148 342 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms