RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W MEP2P41948 499 aa3.41□□□□□ -1.86
PTR3YFR029W YDR391CQ04170 232 aa3.41□□□□□ -1.86
PTR3YFR029W SDH7Q04401 133 aa3.41□□□□□ -1.86
PTR3YFR029W PRP11Q07350 266 aaPredicted RBP3.41□□□□□ -1.86
PTR3YFR029W SYC1Q08553 188 aaPredicted RBP3.41□□□□□ -1.86
PTR3YFR029W MDM32Q12171 622 aa3.41□□□□□ -1.86
PTR3YFR029W SWR1Q05471 1514 aa3.41□□□□□ -1.86
PTR3YFR029W CDC7P06243 507 aa3.4□□□□□ -1.87
PTR3YFR029W MSI1P13712 422 aa3.4□□□□□ -1.87
PTR3YFR029W LDB16P25587 256 aa3.4□□□□□ -1.87
PTR3YFR029W POP8P38208 133 aa3.4□□□□□ -1.87
PTR3YFR029W RPS20P38701 121 aaKnown RBP3.4□□□□□ -1.87
PTR3YFR029W ARO8P53090 500 aaKnown RBP3.4□□□□□ -1.87
PTR3YFR029W LSM3P57743 89 aaKnown RBP3.4□□□□□ -1.87
PTR3YFR029W GEP5Q12393 293 aa3.4□□□□□ -1.87
PTR3YFR029W YIL177CP40434 1758 aa3.4□□□□□ -1.87
PTR3YFR029W YJL225CP40889 1758 aa3.4□□□□□ -1.87
PTR3YFR029W YMR316C-AI2HB70 103 aa3.39□□□□□ -1.87
PTR3YFR029W DDI2P0CH63 225 aa3.39□□□□□ -1.87
PTR3YFR029W DDI3P0CH64 225 aa3.39□□□□□ -1.87
PTR3YFR029W YFL068WP0CX99 160 aa3.39□□□□□ -1.87
PTR3YFR029W YLL066W-AP0CY00 160 aa3.39□□□□□ -1.87
PTR3YFR029W YLL067W-AP0CY01 160 aa3.39□□□□□ -1.87
PTR3YFR029W SNF4P12904 322 aa3.39□□□□□ -1.87
PTR3YFR029W URE2P23202 354 aaKnown RBP3.39□□□□□ -1.87
PTR3YFR029W PRY2P36110 329 aa3.39□□□□□ -1.87
PTR3YFR029W SCO2P38072 301 aa3.39□□□□□ -1.87
PTR3YFR029W YJL213WP40896 331 aa3.39□□□□□ -1.87
PTR3YFR029W CAT5P41735 233 aa3.39□□□□□ -1.87
PTR3YFR029W ILM1P47155 203 aa3.39□□□□□ -1.87
PTR3YFR029W AAH1P53909 347 aa3.39□□□□□ -1.87
PTR3YFR029W CWC27Q02770 301 aa3.39□□□□□ -1.87
PTR3YFR029W ADD37Q03233 198 aa3.39□□□□□ -1.87
PTR3YFR029W THI74Q04083 370 aa3.39□□□□□ -1.87
PTR3YFR029W YPL278CQ08990 100 aa3.39□□□□□ -1.87
PTR3YFR029W EAF3Q12432 401 aa3.39□□□□□ -1.87
PTR3YFR029W YAL063C-AQ3E791 96 aa3.39□□□□□ -1.87
PTR3YFR029W CCH1P50077 2039 aa3.39□□□□□ -1.87
PTR3YFR029W MBF1O14467 151 aaKnown RBP3.39□□□□□ -1.87
PTR3YFR029W CBP6P07253 162 aaPredicted RBP3.39□□□□□ -1.87
PTR3YFR029W GPA2P10823 449 aa3.39□□□□□ -1.87
PTR3YFR029W RPL30P14120 105 aaKnown RBP3.39□□□□□ -1.87
PTR3YFR029W SPO13P23624 291 aa3.39□□□□□ -1.87
PTR3YFR029W MRPL24P36525 258 aaPredicted RBP3.39□□□□□ -1.87
PTR3YFR029W AST2P39945 430 aaKnown RBP3.39□□□□□ -1.87
PTR3YFR029W HMF1P40037 129 aaKnown RBP3.39□□□□□ -1.87
PTR3YFR029W MNN5P46982 586 aa3.39□□□□□ -1.87
PTR3YFR029W SDS23P53172 527 aa3.39□□□□□ -1.87
PTR3YFR029W YNL010WP53981 241 aaKnown RBP3.39□□□□□ -1.87
PTR3YFR029W COF1Q03048 143 aaKnown RBP3.39□□□□□ -1.87
PTR3YFR029W PLP1Q04004 230 aa3.39□□□□□ -1.87
PTR3YFR029W RRG7Q08774 242 aaPredicted RBP3.39□□□□□ -1.87
PTR3YFR029W YPL245WQ12179 454 aaKnown RBP3.39□□□□□ -1.87
PTR3YFR029W YPR011CQ12251 326 aa3.39□□□□□ -1.87
PTR3YFR029W RTR2Q12378 196 aa3.39□□□□□ -1.87
PTR3YFR029W PSF1Q12488 208 aa3.39□□□□□ -1.87
PTR3YFR029W RPL25P04456 142 aaKnown RBP3.38□□□□□ -1.87
PTR3YFR029W PEX2P32800 271 aa3.38□□□□□ -1.87
PTR3YFR029W YBR220CP38318 560 aa3.38□□□□□ -1.87
PTR3YFR029W VMA7P39111 118 aa3.38□□□□□ -1.87
PTR3YFR029W PTI1P39927 425 aaPredicted RBP3.38□□□□□ -1.87
PTR3YFR029W EDC2P40023 145 aaPredicted RBP3.38□□□□□ -1.87
PTR3YFR029W YIL024CP40543 189 aa3.38□□□□□ -1.87
PTR3YFR029W MDM34P53083 459 aa3.38□□□□□ -1.87
PTR3YFR029W PGA1P53896 198 aa3.38□□□□□ -1.87
PTR3YFR029W SLM2P53955 656 aa3.38□□□□□ -1.87
PTR3YFR029W DML1Q03652 475 aa3.38□□□□□ -1.87
PTR3YFR029W YMR254CQ04838 102 aa3.38□□□□□ -1.87
PTR3YFR029W MPD1Q12404 318 aaKnown RBP3.38□□□□□ -1.87
PTR3YFR029W PBI2P0CT04 75 aaKnown RBP3.37□□□□□ -1.87
PTR3YFR029W STP22P25604 385 aa3.37□□□□□ -1.87
PTR3YFR029W YJR085CP47131 105 aaKnown RBP3.37□□□□□ -1.87
PTR3YFR029W UFD1P53044 361 aa3.37□□□□□ -1.87
PTR3YFR029W ERP1Q05359 219 aaKnown RBP3.37□□□□□ -1.87
PTR3YFR029W ATX2Q12067 313 aa3.37□□□□□ -1.87
PTR3YFR029W HIR3P47171 1648 aa3.37□□□□□ -1.87
PTR3YFR029W XRN1P22147 1528 aaKnown RBP3.37□□□□□ -1.87
PTR3YFR029W SHE2P36068 246 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
PTR3YFR029W PAN3P36102 679 aaPredicted RBP3.37□□□□□ -1.87
PTR3YFR029W YKR070WP36151 352 aaKnown RBP3.37□□□□□ -1.87
PTR3YFR029W YPL073CP40323 161 aa3.37□□□□□ -1.87
PTR3YFR029W YFR054CP43622 192 aa3.37□□□□□ -1.87
PTR3YFR029W SAE3P89114 91 aa3.37□□□□□ -1.87
PTR3YFR029W INP1Q03694 420 aa3.37□□□□□ -1.87
PTR3YFR029W NKP2Q06162 153 aa3.37□□□□□ -1.87
PTR3YFR029W YFR032C-BQ8TGU2 87 aa3.37□□□□□ -1.87
PTR3YFR029W NUP157P40064 1391 aaKnown RBP3.36□□□□□ -1.87
PTR3YFR029W Q0255P03881 472 aa3.36□□□□□ -1.87
PTR3YFR029W CKS1P20486 150 aaKnown RBP3.36□□□□□ -1.87
PTR3YFR029W URA10P30402 227 aa3.36□□□□□ -1.87
PTR3YFR029W SMP1P38128 452 aa3.36□□□□□ -1.87
PTR3YFR029W GGC1P38988 300 aa3.36□□□□□ -1.87
PTR3YFR029W TIM17P39515 158 aa3.36□□□□□ -1.87
PTR3YFR029W IRC22P40006 225 aa3.36□□□□□ -1.87
PTR3YFR029W FIP1P45976 327 aa3.36□□□□□ -1.87
PTR3YFR029W OST2P46964 130 aa3.36□□□□□ -1.87
PTR3YFR029W AVT1P47082 602 aa3.36□□□□□ -1.87
PTR3YFR029W HHT1P61830 136 aa3.36□□□□□ -1.87
PTR3YFR029W GOT1Q03554 138 aa3.36□□□□□ -1.87
PTR3YFR029W CNL1Q06333 122 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms