RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W HSV2P50079 448 aaPredicted RBP6.88□□□□□ -1.31
YRF1-1YDR545W SHH3Q04487 196 aa6.88□□□□□ -1.31
YRF1-1YDR545W SPT15P13393 240 aaKnown RBP6.88□□□□□ -1.31
YRF1-1YDR545W ERG4P25340 473 aa6.88□□□□□ -1.31
YRF1-1YDR545W YPT53P36019 220 aa6.88□□□□□ -1.31
YRF1-1YDR545W YBR096WP38256 230 aa6.88□□□□□ -1.31
YRF1-1YDR545W SLM6P38343 150 aa6.88□□□□□ -1.31
YRF1-1YDR545W SKN7P38889 622 aa6.88□□□□□ -1.31
YRF1-1YDR545W TMA10Q06177 86 aa6.88□□□□□ -1.31
YRF1-1YDR545W STE18P18852 110 aa6.87□□□□□ -1.31
YRF1-1YDR545W GAS1P22146 559 aaKnown RBP6.87□□□□□ -1.31
YRF1-1YDR545W YCR007CP25354 239 aa6.87□□□□□ -1.31
YRF1-1YDR545W RNQ1P25367 405 aa6.87□□□□□ -1.31
YRF1-1YDR545W ERJ5P43613 295 aaPredicted RBP6.87□□□□□ -1.31
YRF1-1YDR545W XPT1P47165 209 aa6.87□□□□□ -1.31
YRF1-1YDR545W YMR166CQ03829 368 aa6.87□□□□□ -1.31
YRF1-1YDR545W ELO2P25358 347 aa6.87□□□□□ -1.31
YRF1-1YDR545W MTC7P32633 139 aa6.87□□□□□ -1.31
YRF1-1YDR545W TRM7P38238 310 aaKnown RBP6.87□□□□□ -1.31
YRF1-1YDR545W FLO5P38894 1075 aa6.87□□□□□ -1.31
YRF1-1YDR545W YOR387CQ08910 206 aa6.87□□□□□ -1.31
YRF1-1YDR545W WIP1Q2V2P8 89 aa6.87□□□□□ -1.31
YRF1-1YDR545W IRS4P36115 615 aaKnown RBP6.87□□□□□ -1.31
YRF1-1YDR545W YEL068CP39977 110 aa6.87□□□□□ -1.31
YRF1-1YDR545W SKP1P52286 194 aa6.87□□□□□ -1.31
YRF1-1YDR545W CGI121Q03705 181 aaKnown RBP6.87□□□□□ -1.31
YRF1-1YDR545W SLH1P53327 1967 aaKnown RBP6.87□□□□□ -1.31
YRF1-1YDR545W MDM35O60200 86 aa6.86□□□□□ -1.31
YRF1-1YDR545W YOL029CQ08187 201 aa6.86□□□□□ -1.31
YRF1-1YDR545W CWP1P28319 239 aa6.86□□□□□ -1.31
YRF1-1YDR545W CTA1P15202 515 aa6.86□□□□□ -1.31
YRF1-1YDR545W YER158CP40095 573 aa6.86□□□□□ -1.31
YRF1-1YDR545W YKR104WP0CE69 306 aa6.86□□□□□ -1.31
YRF1-1YDR545W HMX1P32339 317 aa6.86□□□□□ -1.31
YRF1-1YDR545W BRR6P53062 197 aa6.86□□□□□ -1.31
YRF1-1YDR545W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
YRF1-1YDR545W SPO7P18410 259 aa6.85□□□□□ -1.31
YRF1-1YDR545W SEC72P39742 193 aaKnown RBP6.85□□□□□ -1.31
YRF1-1YDR545W PAC2P39937 518 aa6.85□□□□□ -1.31
YRF1-1YDR545W YIL067CP40514 678 aa6.85□□□□□ -1.31
YRF1-1YDR545W PAM18Q07914 168 aa6.85□□□□□ -1.31
YRF1-1YDR545W MCT1Q12283 360 aa6.85□□□□□ -1.31
YRF1-1YDR545W TIM17P39515 158 aa6.85□□□□□ -1.31
YRF1-1YDR545W TUB4P53378 473 aa6.85□□□□□ -1.31
YRF1-1YDR545W SAM50P53969 484 aa6.85□□□□□ -1.31
YRF1-1YDR545W HIT1P46973 164 aa6.85□□□□□ -1.31
YRF1-1YDR545W MTO1P53070 669 aa6.85□□□□□ -1.31
YRF1-1YDR545W ISR1Q06098 443 aaKnown RBP6.85□□□□□ -1.31
YRF1-1YDR545W YOR304C-AO14468 76 aa6.84□□□□□ -1.31
YRF1-1YDR545W SLY41P22215 453 aa6.84□□□□□ -1.31
YRF1-1YDR545W MRPL16P38064 232 aa6.84□□□□□ -1.31
YRF1-1YDR545W TNA1P53322 534 aa6.84□□□□□ -1.31
YRF1-1YDR545W HRT1Q08273 121 aa6.84□□□□□ -1.31
YRF1-1YDR545W YOR105WQ08504 108 aa6.84□□□□□ -1.31
YRF1-1YDR545W LEU9Q12166 604 aaKnown RBP6.84□□□□□ -1.31
YRF1-1YDR545W MRP49P32388 137 aa6.84□□□□□ -1.31
YRF1-1YDR545W ABM1P47146 123 aa6.84□□□□□ -1.31
YRF1-1YDR545W CTS2Q06350 511 aa6.84□□□□□ -1.31
YRF1-1YDR545W GLN1P32288 370 aaKnown RBP6.84□□□□□ -1.32
YRF1-1YDR545W YBR220CP38318 560 aa6.84□□□□□ -1.32
YRF1-1YDR545W MSL1P40567 111 aaPredicted RBP6.84□□□□□ -1.32
YRF1-1YDR545W SNO3P43544 222 aa6.84□□□□□ -1.32
YRF1-1YDR545W TTI2P47168 421 aa6.84□□□□□ -1.32
YRF1-1YDR545W SNO2P53823 222 aa6.84□□□□□ -1.32
YRF1-1YDR545W YKL187CP34231 750 aa6.83□□□□□ -1.32
YRF1-1YDR545W QDR3P38227 689 aa6.83□□□□□ -1.32
YRF1-1YDR545W PRE5P40302 234 aaKnown RBP6.83□□□□□ -1.32
YRF1-1YDR545W LSB3P43603 459 aaKnown RBP6.83□□□□□ -1.32
YRF1-1YDR545W COQ11Q05892 277 aa6.83□□□□□ -1.32
YRF1-1YDR545W MEK1P24719 497 aaPredicted RBP6.83□□□□□ -1.32
YRF1-1YDR545W SMK1P41808 388 aa6.83□□□□□ -1.32
YRF1-1YDR545W YNR064CP53750 290 aa6.83□□□□□ -1.32
YRF1-1YDR545W RFU1Q08003 200 aa6.83□□□□□ -1.32
YRF1-1YDR545W RFA2P26754 273 aaKnown RBP6.83□□□□□ -1.32
YRF1-1YDR545W MAC1P35192 417 aa6.83□□□□□ -1.32
YRF1-1YDR545W YJL193WP39542 402 aa6.82□□□□□ -1.32
YRF1-1YDR545W YGR151CP53287 111 aa6.82□□□□□ -1.32
YRF1-1YDR545W RPL34AP87262 121 aaPredicted RBP6.82□□□□□ -1.32
YRF1-1YDR545W TSA2Q04120 196 aa6.82□□□□□ -1.32
YRF1-1YDR545W ECM29P38737 1868 aa6.82□□□□□ -1.32
YRF1-1YDR545W PAU16P35994 123 aa6.82□□□□□ -1.32
YRF1-1YDR545W AUR1P36107 401 aaPredicted RBP6.82□□□□□ -1.32
YRF1-1YDR545W VNX1P42839 908 aa6.82□□□□□ -1.32
YRF1-1YDR545W YMR082CQ04276 118 aa6.82□□□□□ -1.32
YRF1-1YDR545W Q0144Q9ZZW2 109 aa6.82□□□□□ -1.32
YRF1-1YDR545W GLC7P32598 312 aaKnown RBP6.82□□□□□ -1.32
YRF1-1YDR545W ZIM17P42844 174 aa6.82□□□□□ -1.32
YRF1-1YDR545W RNH201P53942 307 aa6.82□□□□□ -1.32
YRF1-1YDR545W UPS3Q04006 179 aa6.82□□□□□ -1.32
YRF1-1YDR545W ASM4Q05166 528 aa6.82□□□□□ -1.32
YRF1-1YDR545W YMR084WA2P2R3 262 aa6.81□□□□□ -1.32
YRF1-1YDR545W CET1O13297 549 aaPredicted RBP6.81□□□□□ -1.32
YRF1-1YDR545W MSO1P53604 210 aaKnown RBP6.81□□□□□ -1.32
YRF1-1YDR545W YFH1Q07540 174 aa6.81□□□□□ -1.32
YRF1-1YDR545W TPT1Q12272 230 aaKnown RBP6.81□□□□□ -1.32
YRF1-1YDR545W POR1P04840 283 aaKnown RBP6.81□□□□□ -1.32
YRF1-1YDR545W HOG1P32485 435 aa6.81□□□□□ -1.32
YRF1-1YDR545W YGL235WP53071 178 aa6.81□□□□□ -1.32
YRF1-1YDR545W LOA1Q06508 300 aa6.81□□□□□ -1.32
YRF1-1YDR545W YLR363W-AQ3E747 85 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 256.7 ms