RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C YKR005CQ02203 525 aa-1.85□□□□□ -2.71
SPG3YDR504C YMR226CQ05016 267 aaKnown RBP-1.85□□□□□ -2.71
SPG3YDR504C YDR157WA0A023PZE8 133 aa-1.86□□□□□ -2.71
SPG3YDR504C RPL43AP0CX25 92 aaKnown RBP-1.86□□□□□ -2.71
SPG3YDR504C RPL43BP0CX26 92 aa-1.86□□□□□ -2.71
SPG3YDR504C MET16P18408 261 aaPredicted RBP-1.86□□□□□ -2.71
SPG3YDR504C MET31Q03081 177 aa-1.86□□□□□ -2.71
SPG3YDR504C SNZ1Q03148 297 aa-1.86□□□□□ -2.71
SPG3YDR504C FYV12Q08559 129 aa-1.86□□□□□ -2.71
SPG3YDR504C ABP140Q08641 628 aaKnown RBP-1.86□□□□□ -2.71
SPG3YDR504C YPL229WQ99395 206 aa-1.86□□□□□ -2.71
SPG3YDR504C SGE1P33335 543 aa-1.87□□□□□ -2.71
SPG3YDR504C YBR285WP38354 144 aa-1.87□□□□□ -2.71
SPG3YDR504C IRC22P40006 225 aa-1.87□□□□□ -2.71
SPG3YDR504C UPS3Q04006 179 aa-1.87□□□□□ -2.71
SPG3YDR504C FIT1Q04433 528 aa-1.87□□□□□ -2.71
SPG3YDR504C TIM9O74700 87 aa-1.88□□□□□ -2.71
SPG3YDR504C YOL013W-AP0C272 63 aaPredicted RBP-1.88□□□□□ -2.71
SPG3YDR504C YLR156WP0CE96 114 aa-1.88□□□□□ -2.71
SPG3YDR504C YLR159WP0CE97 114 aa-1.88□□□□□ -2.71
SPG3YDR504C YLR161WP0CE98 114 aa-1.88□□□□□ -2.71
SPG3YDR504C MRPL28P36527 147 aa-1.88□□□□□ -2.71
SPG3YDR504C YBR096WP38256 230 aa-1.88□□□□□ -2.71
SPG3YDR504C MRX5P47007 382 aa-1.88□□□□□ -2.71
SPG3YDR504C YJR015WP47090 510 aa-1.88□□□□□ -2.71
SPG3YDR504C YPR098CQ06089 161 aa-1.88□□□□□ -2.71
SPG3YDR504C CDC10P25342 322 aaKnown RBP-1.89□□□□□ -2.71
SPG3YDR504C YCR001WP25347 104 aa-1.89□□□□□ -2.71
SPG3YDR504C COA1P40452 197 aa-1.89□□□□□ -2.71
SPG3YDR504C DID2P69771 204 aa-1.89□□□□□ -2.71
SPG3YDR504C HIS1P00498 297 aaKnown RBP-1.9□□□□□ -2.71
SPG3YDR504C MSF1P08425 469 aa-1.9□□□□□ -2.71
SPG3YDR504C GCD2P12754 651 aaPredicted RBP-1.9□□□□□ -2.71
SPG3YDR504C SMB1P40018 196 aaKnown RBP-1.9□□□□□ -2.71
SPG3YDR504C FMP33P46998 180 aa-1.9□□□□□ -2.71
SPG3YDR504C SPO19Q03029 223 aa-1.9□□□□□ -2.71
SPG3YDR504C YPR013CQ12145 317 aa-1.9□□□□□ -2.71
SPG3YDR504C DAD4P69851 72 aa-1.91□□□□□ -2.72
SPG3YDR504C SPO13P23624 291 aa-1.92□□□□□ -2.72
SPG3YDR504C ATG22P25568 528 aa-1.92□□□□□ -2.72
SPG3YDR504C HOM6P31116 359 aaKnown RBP-1.92□□□□□ -2.72
SPG3YDR504C YMD8Q03697 442 aa-1.92□□□□□ -2.72
SPG3YDR504C OST6Q03723 332 aa-1.92□□□□□ -2.72
SPG3YDR504C RIB1P38066 345 aa-1.93□□□□□ -2.72
SPG3YDR504C POP4P38336 279 aa-1.93□□□□□ -2.72
SPG3YDR504C YHL018WP38744 120 aaPredicted RBP-1.93□□□□□ -2.72
SPG3YDR504C GCD14P46959 383 aaPredicted RBP-1.93□□□□□ -2.72
SPG3YDR504C LPP1Q04396 274 aa-1.93□□□□□ -2.72
SPG3YDR504C ELP6Q04868 273 aa-1.93□□□□□ -2.72
SPG3YDR504C UPS1Q05776 175 aa-1.93□□□□□ -2.72
SPG3YDR504C SEI1Q06058 285 aa-1.93□□□□□ -2.72
SPG3YDR504C YLR413WQ06689 675 aa-1.93□□□□□ -2.72
SPG3YDR504C ECM4P36156 370 aa-1.94□□□□□ -2.72
SPG3YDR504C TAR1Q8TGM6 124 aa-1.94□□□□□ -2.72
SPG3YDR504C YFR032C-BQ8TGU2 87 aa-1.94□□□□□ -2.72
SPG3YDR504C PRS2P38620 318 aaKnown RBP-1.95□□□□□ -2.72
SPG3YDR504C PRO2P54885 456 aaKnown RBP-1.95□□□□□ -2.72
SPG3YDR504C ERV41Q04651 352 aa-1.95□□□□□ -2.72
SPG3YDR504C GMC2Q06201 188 aa-1.95□□□□□ -2.72
SPG3YDR504C FIT2Q08906 153 aa-1.95□□□□□ -2.72
SPG3YDR504C MEK1P24719 497 aaPredicted RBP-1.96□□□□□ -2.72
SPG3YDR504C RCF1Q03713 159 aa-1.96□□□□□ -2.72
SPG3YDR504C MGR3Q04472 501 aa-1.96□□□□□ -2.72
SPG3YDR504C MAK5P38112 773 aaPredicted RBP-1.97□□□□□ -2.72
SPG3YDR504C SLM6P38343 150 aa-1.97□□□□□ -2.72
SPG3YDR504C YHR127WP38833 243 aaKnown RBP-1.97□□□□□ -2.72
SPG3YDR504C UBC12P52491 188 aa-1.97□□□□□ -2.72
SPG3YDR504C PNC1P53184 216 aaKnown RBP-1.97□□□□□ -2.72
SPG3YDR504C VPS71Q03433 280 aa-1.98□□□□□ -2.73
SPG3YDR504C SPT7P35177 1332 aa-1.98□□□□□ -2.73
SPG3YDR504C COX8P04039 78 aa-1.99□□□□□ -2.73
SPG3YDR504C RHO3Q00245 231 aaKnown RBP-1.99□□□□□ -2.73
SPG3YDR504C YDC1Q02896 317 aa-1.99□□□□□ -2.73
SPG3YDR504C YML108WQ03759 105 aa-1.99□□□□□ -2.73
SPG3YDR504C MCP1Q12106 302 aa-1.99□□□□□ -2.73
SPG3YDR504C YMR141CP40211 102 aa-2□□□□□ -2.73
SPG3YDR504C NUP84P52891 726 aa-2□□□□□ -2.73
SPG3YDR504C KEI1Q06346 221 aa-2□□□□□ -2.73
SPG3YDR504C RPL27AP0C2H6 136 aaKnown RBP-2.01□□□□□ -2.73
SPG3YDR504C LAP3Q01532 483 aaKnown RBP RIP-Chip data-2.01□□□□□ -2.73not detected
SPG3YDR504C PRP11Q07350 266 aaPredicted RBP-2.01□□□□□ -2.73
SPG3YDR504C DUR1,2P32528 1835 aaKnown RBP-2.01□□□□□ -2.73
SPG3YDR504C YMR144WP40214 342 aaKnown RBP-2.02□□□□□ -2.73
SPG3YDR504C ALB1P47019 175 aaPredicted RBP-2.02□□□□□ -2.73
SPG3YDR504C USE1P53146 245 aa-2.02□□□□□ -2.73
SPG3YDR504C YDR274CP87283 123 aa-2.02□□□□□ -2.73
SPG3YDR504C FMP16Q12497 93 aa-2.02□□□□□ -2.73
SPG3YDR504C SNF2P22082 1703 aa-2.03□□□□□ -2.73
SPG3YDR504C SEC17P32602 292 aa-2.03□□□□□ -2.73
SPG3YDR504C YKL075CP36083 450 aa-2.03□□□□□ -2.73
SPG3YDR504C BFR1P38934 470 aaKnown RBP RIP-Chip data-2.03□□□□□ -2.73not detected
SPG3YDR504C PET191Q02772 108 aa-2.03□□□□□ -2.73
SPG3YDR504C JLP1Q12358 412 aa-2.03□□□□□ -2.73
SPG3YDR504C LSO2Q3E772 92 aaKnown RBP-2.03□□□□□ -2.73
SPG3YDR504C TVP23P38962 199 aa-2.04□□□□□ -2.74
SPG3YDR504C MOB1P40484 314 aa-2.04□□□□□ -2.74
SPG3YDR504C RNH1Q04740 348 aa-2.04□□□□□ -2.74
SPG3YDR504C MGM101P32787 269 aaKnown RBP-2.05□□□□□ -2.74
SPG3YDR504C PAN3P36102 679 aaPredicted RBP-2.05□□□□□ -2.74
SPG3YDR504C SKG1P36169 355 aa-2.05□□□□□ -2.74
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms