RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W YKL063CP35725 167 aa3.04□□□□□ -1.92
RRP17YDR412W YOR062CP36025 268 aa3.04□□□□□ -1.92
RRP17YDR412W PRS2P38620 318 aaKnown RBP3.04□□□□□ -1.92
RRP17YDR412W RCK1P38622 512 aa3.04□□□□□ -1.92
RRP17YDR412W YER184CP39961 794 aa3.04□□□□□ -1.92
RRP17YDR412W YNL194CP40169 301 aa3.04□□□□□ -1.92
RRP17YDR412W HAC1P41546 238 aa3.04□□□□□ -1.92
RRP17YDR412W GIM5Q04493 163 aa3.04□□□□□ -1.92
RRP17YDR412W PIN3Q06449 215 aa3.04□□□□□ -1.92
RRP17YDR412W FOL3Q12676 427 aaPredicted RBP3.04□□□□□ -1.92
RRP17YDR412W FLO9P39712 1322 aa3.03□□□□□ -1.92
RRP17YDR412W MET2P08465 486 aa3.03□□□□□ -1.92
RRP17YDR412W YMR31P19955 123 aa3.03□□□□□ -1.92
RRP17YDR412W MDH2P22133 377 aa3.03□□□□□ -1.92
RRP17YDR412W MTW1P39731 289 aa3.03□□□□□ -1.92
RRP17YDR412W THO1P40040 218 aaKnown RBP3.03□□□□□ -1.92
RRP17YDR412W HPM1P40481 377 aa3.03□□□□□ -1.92
RRP17YDR412W GDS1P41913 522 aa3.03□□□□□ -1.92
RRP17YDR412W TAD2P47058 250 aa3.03□□□□□ -1.92
RRP17YDR412W CWC23P52868 283 aaPredicted RBP3.03□□□□□ -1.92
RRP17YDR412W YGL262WP53054 175 aa3.03□□□□□ -1.92
RRP17YDR412W HCH1P53834 153 aa3.03□□□□□ -1.92
RRP17YDR412W SEC13Q04491 297 aaKnown RBP3.03□□□□□ -1.92
RRP17YDR412W RDL2Q08742 149 aaKnown RBP3.03□□□□□ -1.92
RRP17YDR412W YOR097CQ12274 175 aaPredicted RBP3.03□□□□□ -1.92
RRP17YDR412W BLM10P43583 2143 aa3.02□□□□□ -1.93
RRP17YDR412W HEM4P06174 275 aa3.02□□□□□ -1.93
RRP17YDR412W YBR121C-AP0C5L4 52 aa3.02□□□□□ -1.93
RRP17YDR412W TFS1P14306 219 aa3.02□□□□□ -1.93
RRP17YDR412W ERD2P18414 219 aa3.02□□□□□ -1.93
RRP17YDR412W RPS1BP23248 255 aaKnown RBP3.02□□□□□ -1.93
RRP17YDR412W YPC1P38298 316 aa3.02□□□□□ -1.93
RRP17YDR412W ARN2P38724 620 aa3.02□□□□□ -1.93
RRP17YDR412W YHR180WP38868 163 aa3.02□□□□□ -1.93
RRP17YDR412W DIA1P54005 336 aa3.02□□□□□ -1.93
RRP17YDR412W RAF1Q06891 181 aa3.02□□□□□ -1.93
RRP17YDR412W BRX1Q08235 291 aaKnown RBP3.02□□□□□ -1.93
RRP17YDR412W YPR202WQ08993 238 aa3.02□□□□□ -1.93
RRP17YDR412W UTP23Q12339 254 aaKnown RBP3.02□□□□□ -1.93
RRP17YDR412W YDR157WA0A023PZE8 133 aa3.01□□□□□ -1.93
RRP17YDR412W YAL064W-BO13512 126 aa3.01□□□□□ -1.93
RRP17YDR412W REP1P03871 373 aa3.01□□□□□ -1.93
RRP17YDR412W RNA15P25299 296 aaPredicted RBP3.01□□□□□ -1.93
RRP17YDR412W RPL16BP26785 198 aaKnown RBP3.01□□□□□ -1.93
RRP17YDR412W EHD3P28817 500 aa3.01□□□□□ -1.93
RRP17YDR412W ATP7P30902 174 aa3.01□□□□□ -1.93
RRP17YDR412W GDH2P33327 1092 aaKnown RBP3.01□□□□□ -1.93
RRP17YDR412W YKL187CP34231 750 aa3.01□□□□□ -1.93
RRP17YDR412W TRM5P38793 499 aa3.01□□□□□ -1.93
RRP17YDR412W EGD2P38879 174 aaKnown RBP3.01□□□□□ -1.93
RRP17YDR412W SEN34P39707 275 aa3.01□□□□□ -1.93
RRP17YDR412W YIA6P40556 373 aa3.01□□□□□ -1.93
RRP17YDR412W ADO1P47143 340 aaKnown RBP3.01□□□□□ -1.93
RRP17YDR412W USE1P53146 245 aa3.01□□□□□ -1.93
RRP17YDR412W SYF2P53277 215 aaPredicted RBP3.01□□□□□ -1.93
RRP17YDR412W TPS1Q00764 495 aaKnown RBP3.01□□□□□ -1.93
RRP17YDR412W YPL039WQ03080 316 aa3.01□□□□□ -1.93
RRP17YDR412W FMN1Q03778 218 aa3.01□□□□□ -1.93
RRP17YDR412W DYN3Q04949 312 aa3.01□□□□□ -1.93
RRP17YDR412W TAZ1Q06510 381 aa3.01□□□□□ -1.93
RRP17YDR412W CSM4Q08955 156 aa3.01□□□□□ -1.93
RRP17YDR412W GRE1Q08969 168 aa3.01□□□□□ -1.93
RRP17YDR412W YDL109CQ12103 647 aa3.01□□□□□ -1.93
RRP17YDR412W MCP1Q12106 302 aa3.01□□□□□ -1.93
RRP17YDR412W YDL211CQ12121 372 aa3.01□□□□□ -1.93
RRP17YDR412W MCT1Q12283 360 aa3.01□□□□□ -1.93
RRP17YDR412W TIM9O74700 87 aa3□□□□□ -1.93
RRP17YDR412W HTB1P02293 131 aaKnown RBP3□□□□□ -1.93
RRP17YDR412W HTB2P02294 131 aa3□□□□□ -1.93
RRP17YDR412W DEP1P31385 405 aa3□□□□□ -1.93
RRP17YDR412W QRI5P32344 111 aa3□□□□□ -1.93
RRP17YDR412W SPT4P32914 102 aaPredicted RBP3□□□□□ -1.93
RRP17YDR412W MCH2P36032 473 aa3□□□□□ -1.93
RRP17YDR412W YBR241CP38142 488 aa3□□□□□ -1.93
RRP17YDR412W ECM8P38246 354 aa3□□□□□ -1.93
RRP17YDR412W YGP1P38616 354 aaKnown RBP3□□□□□ -1.93
RRP17YDR412W SEC72P39742 193 aaKnown RBP3□□□□□ -1.93
RRP17YDR412W SMB1P40018 196 aaKnown RBP3□□□□□ -1.93
RRP17YDR412W YMR144WP40214 342 aaKnown RBP3□□□□□ -1.93
RRP17YDR412W YGR201CP42936 225 aa3□□□□□ -1.93
RRP17YDR412W YFL051CP43552 160 aa3□□□□□ -1.93
RRP17YDR412W IGD1P43598 195 aa3□□□□□ -1.93
RRP17YDR412W CIN2P46670 268 aa3□□□□□ -1.93
RRP17YDR412W YJR012CP47087 207 aa3□□□□□ -1.93
RRP17YDR412W UBC13P52490 153 aa3□□□□□ -1.93
RRP17YDR412W YNL095CP53932 642 aa3□□□□□ -1.93
RRP17YDR412W CTR3Q06686 241 aa3□□□□□ -1.93
RRP17YDR412W LOT6Q07923 191 aa3□□□□□ -1.93
RRP17YDR412W NSL1Q12143 216 aa3□□□□□ -1.93
RRP17YDR412W RFM1Q12192 310 aa3□□□□□ -1.93
RRP17YDR412W FRE8Q12209 686 aa3□□□□□ -1.93
RRP17YDR412W QCR7P00128 127 aa2.99□□□□□ -1.93
RRP17YDR412W PIS1P06197 220 aaKnown RBP2.99□□□□□ -1.93
RRP17YDR412W PET9P18239 318 aaKnown RBP2.99□□□□□ -1.93
RRP17YDR412W IDH1P28834 360 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
RRP17YDR412W HEK2P38199 381 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
RRP17YDR412W GPI18P38211 433 aa2.99□□□□□ -1.93
RRP17YDR412W PRS3P38689 320 aaKnown RBP2.99□□□□□ -1.93
RRP17YDR412W YHL037CP38733 133 aa2.99□□□□□ -1.93
RRP17YDR412W SOP4P39543 234 aaPredicted RBP2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms