RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C PTC1P35182 281 aa2.35□□□□□ -2.03
SOK1YDR006C POP8P38208 133 aa2.35□□□□□ -2.03
SOK1YDR006C YEA4P40004 342 aa2.35□□□□□ -2.03
SOK1YDR006C GLE2P40066 365 aa2.35□□□□□ -2.03
SOK1YDR006C YJL218WP40892 196 aaKnown RBP2.35□□□□□ -2.03
SOK1YDR006C ERJ5P43613 295 aaPredicted RBP2.35□□□□□ -2.03
SOK1YDR006C TTI2P47168 421 aa2.35□□□□□ -2.03
SOK1YDR006C DIE2P50076 525 aa2.35□□□□□ -2.03
SOK1YDR006C ARO8P53090 500 aaKnown RBP2.35□□□□□ -2.03
SOK1YDR006C HHO1P53551 258 aa2.35□□□□□ -2.03
SOK1YDR006C TVP18Q04767 167 aa2.35□□□□□ -2.03
SOK1YDR006C YMR317WQ04893 1140 aa2.35□□□□□ -2.03
SOK1YDR006C TAF9Q05027 157 aa2.35□□□□□ -2.03
SOK1YDR006C RRS1Q08746 203 aaKnown RBP2.35□□□□□ -2.03
SOK1YDR006C MPD1Q12404 318 aaKnown RBP2.35□□□□□ -2.03
SOK1YDR006C SSN2P38931 1420 aa2.35□□□□□ -2.03
SOK1YDR006C RPL25P04456 142 aaKnown RBP2.35□□□□□ -2.03
SOK1YDR006C HAP2P06774 265 aa2.35□□□□□ -2.03
SOK1YDR006C SEC22P22214 214 aa2.35□□□□□ -2.03
SOK1YDR006C SUA7P29055 345 aaPredicted RBP2.35□□□□□ -2.03
SOK1YDR006C GSP1P32835 219 aaKnown RBP2.35□□□□□ -2.03
SOK1YDR006C GSP2P32836 220 aaKnown RBP2.35□□□□□ -2.03
SOK1YDR006C SCO2P38072 301 aa2.35□□□□□ -2.03
SOK1YDR006C DLS1P40366 167 aa2.35□□□□□ -2.03
SOK1YDR006C OST1P41543 476 aaKnown RBP2.35□□□□□ -2.03
SOK1YDR006C DIG2Q03373 323 aaKnown RBP2.35□□□□□ -2.03
SOK1YDR006C ECM19Q06011 112 aa2.35□□□□□ -2.03
SOK1YDR006C YOR214CQ12282 236 aa2.35□□□□□ -2.03
SOK1YDR006C NHP6AP11632 93 aaKnown RBP2.34□□□□□ -2.03
SOK1YDR006C ZRT3P34240 503 aa2.34□□□□□ -2.03
SOK1YDR006C SHE1P38200 338 aa2.34□□□□□ -2.03
SOK1YDR006C SHH4Q06236 168 aa2.34□□□□□ -2.03
SOK1YDR006C YLR179CQ06252 201 aaKnown RBP2.34□□□□□ -2.03
SOK1YDR006C SYC1Q08553 188 aaPredicted RBP2.34□□□□□ -2.03
SOK1YDR006C YPL257WQ08974 193 aa2.34□□□□□ -2.03
SOK1YDR006C PSK1P31374 1356 aa2.34□□□□□ -2.03
SOK1YDR006C Q0255P03881 472 aa2.34□□□□□ -2.03
SOK1YDR006C STE7P06784 515 aa2.34□□□□□ -2.03
SOK1YDR006C MRPL20P22354 195 aaPredicted RBP2.34□□□□□ -2.03
SOK1YDR006C URE2P23202 354 aaKnown RBP2.34□□□□□ -2.03
SOK1YDR006C PTM1P32857 523 aa2.34□□□□□ -2.03
SOK1YDR006C SRL3P36167 246 aa2.34□□□□□ -2.03
SOK1YDR006C COS8P38723 381 aa2.34□□□□□ -2.03
SOK1YDR006C YJR015WP47090 510 aa2.34□□□□□ -2.03
SOK1YDR006C APJ1P53940 528 aa2.34□□□□□ -2.03
SOK1YDR006C VPS71Q03433 280 aa2.34□□□□□ -2.03
SOK1YDR006C HPT1Q04178 221 aaKnown RBP2.34□□□□□ -2.03
SOK1YDR006C DGA1Q08650 418 aa2.34□□□□□ -2.03
SOK1YDR006C AYT1Q12226 474 aa2.34□□□□□ -2.03
SOK1YDR006C TOP2P06786 1428 aaKnown RBP2.34□□□□□ -2.04
SOK1YDR006C RPL30P14120 105 aaKnown RBP2.33□□□□□ -2.04
SOK1YDR006C RCN1P36054 211 aa2.33□□□□□ -2.04
SOK1YDR006C HMF1P40037 129 aaKnown RBP2.33□□□□□ -2.04
SOK1YDR006C YNR062CP53748 327 aa2.33□□□□□ -2.04
SOK1YDR006C WSC2P53832 503 aa2.33□□□□□ -2.04
SOK1YDR006C MRX11Q03079 207 aa2.33□□□□□ -2.04
SOK1YDR006C NIP7Q08962 181 aaKnown RBP2.33□□□□□ -2.04
SOK1YDR006C FSF1Q12029 327 aaKnown RBP2.33□□□□□ -2.04
SOK1YDR006C PST1Q12355 444 aa2.33□□□□□ -2.04
SOK1YDR006C SNU23Q12368 194 aaPredicted RBP2.33□□□□□ -2.04
SOK1YDR006C SAM2P19358 384 aaKnown RBP2.33□□□□□ -2.04
SOK1YDR006C ATP15P21306 62 aa2.33□□□□□ -2.04
SOK1YDR006C TRX3P25372 127 aa2.33□□□□□ -2.04
SOK1YDR006C STP22P25604 385 aa2.33□□□□□ -2.04
SOK1YDR006C RPL16AP26784 199 aaKnown RBP2.33□□□□□ -2.04
SOK1YDR006C OCH1P31755 480 aa2.33□□□□□ -2.04
SOK1YDR006C PHO89P38361 574 aa2.33□□□□□ -2.04
SOK1YDR006C EDC2P40023 145 aaPredicted RBP2.33□□□□□ -2.04
SOK1YDR006C FCY21P40039 528 aa2.33□□□□□ -2.04
SOK1YDR006C CFD1P40558 293 aa2.33□□□□□ -2.04
SOK1YDR006C SER2P42941 309 aa2.33□□□□□ -2.04
SOK1YDR006C EAF6P47128 113 aa2.33□□□□□ -2.04
SOK1YDR006C UFD1P53044 361 aa2.33□□□□□ -2.04
SOK1YDR006C YGL088WP53151 121 aa2.33□□□□□ -2.04
SOK1YDR006C YLR030WQ07967 263 aa2.33□□□□□ -2.04
SOK1YDR006C RRP40Q08285 240 aaKnown RBP2.33□□□□□ -2.04
SOK1YDR006C MCP1Q12106 302 aa2.33□□□□□ -2.04
SOK1YDR006C YPR011CQ12251 326 aa2.33□□□□□ -2.04
SOK1YDR006C CRC1Q12289 327 aa2.33□□□□□ -2.04
SOK1YDR006C YPS3Q12303 508 aa2.33□□□□□ -2.04
SOK1YDR006C PDR18P53756 1333 aa2.33□□□□□ -2.04
SOK1YDR006C CDC8P00572 216 aa2.33□□□□□ -2.04
SOK1YDR006C SIR2P06700 562 aa2.33□□□□□ -2.04
SOK1YDR006C PCL1P24867 279 aa2.33□□□□□ -2.04
SOK1YDR006C YPL073CP40323 161 aa2.33□□□□□ -2.04
SOK1YDR006C YFR054CP43622 192 aa2.33□□□□□ -2.04
SOK1YDR006C SFT1P43682 97 aa2.33□□□□□ -2.04
SOK1YDR006C LSM3P57743 89 aaKnown RBP2.33□□□□□ -2.04
SOK1YDR006C COF1Q03048 143 aaKnown RBP2.33□□□□□ -2.04
SOK1YDR006C SDH7Q04401 133 aa2.33□□□□□ -2.04
SOK1YDR006C NKP2Q06162 153 aa2.33□□□□□ -2.04
SOK1YDR006C RRG7Q08774 242 aaPredicted RBP2.33□□□□□ -2.04
SOK1YDR006C YPL247CQ12523 523 aa2.33□□□□□ -2.04
SOK1YDR006C VAR1P02381 398 aa2.32□□□□□ -2.04
SOK1YDR006C REP2P03872 296 aa2.32□□□□□ -2.04
SOK1YDR006C YER039C-AP0CD97 72 aa2.32□□□□□ -2.04
SOK1YDR006C RPS18AP0CX55 146 aaKnown RBP2.32□□□□□ -2.04
SOK1YDR006C RPS18BP0CX56 146 aaPredicted RBP2.32□□□□□ -2.04
SOK1YDR006C PRY2P36110 329 aa2.32□□□□□ -2.04
SOK1YDR006C VTC1P40046 129 aaRIP-Chip data2.32□□□□□ -2.04not detected
Retrieved 100 of 5,963 RNA–protein pairs in 82.4 ms