RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C PSD1P39006 500 aa6.32□□□□□ -1.4
CDC13YDL220C RPL13BP40212 199 aaKnown RBP6.32□□□□□ -1.4
CDC13YDL220C YPS6P40583 537 aa6.32□□□□□ -1.4
CDC13YDL220C UBP8P50102 471 aa6.32□□□□□ -1.4
CDC13YDL220C YNL034WP53963 612 aa6.32□□□□□ -1.4
CDC13YDL220C ARA2Q04212 335 aa6.32□□□□□ -1.4
CDC13YDL220C ENB1Q08299 606 aa6.32□□□□□ -1.4
CDC13YDL220C ICT1Q12385 394 aa6.32□□□□□ -1.4
CDC13YDL220C RAX2Q12465 1220 aa6.32□□□□□ -1.4
CDC13YDL220C YPR015CQ12531 247 aa6.32□□□□□ -1.4
CDC13YDL220C LRE1P25579 583 aaKnown RBP6.31□□□□□ -1.4
CDC13YDL220C ARC40P38328 384 aaKnown RBP6.31□□□□□ -1.4
CDC13YDL220C TRR2P38816 342 aa6.31□□□□□ -1.4
CDC13YDL220C ERG28P40030 148 aa6.31□□□□□ -1.4
CDC13YDL220C BOL2P53082 120 aa6.31□□□□□ -1.4
CDC13YDL220C YOL024WQ08172 172 aa6.31□□□□□ -1.4
CDC13YDL220C MRH1Q12117 320 aaPredicted RBP6.31□□□□□ -1.4
CDC13YDL220C ATP10P18496 279 aa6.31□□□□□ -1.4
CDC13YDL220C PRP18P33411 251 aaPredicted RBP6.31□□□□□ -1.4
CDC13YDL220C FLO5P38894 1075 aa6.31□□□□□ -1.4
CDC13YDL220C YEL028WP39989 153 aa6.31□□□□□ -1.4
CDC13YDL220C YJL068CP40363 299 aa6.31□□□□□ -1.4
CDC13YDL220C BSC1Q12140 328 aa6.31□□□□□ -1.4
CDC13YDL220C YPL229WQ99395 206 aa6.31□□□□□ -1.4
CDC13YDL220C PCL1P24867 279 aa6.3□□□□□ -1.4
CDC13YDL220C ERG4P25340 473 aa6.3□□□□□ -1.4
CDC13YDL220C OCH1P31755 480 aa6.3□□□□□ -1.4
CDC13YDL220C OXA1P39952 402 aa6.3□□□□□ -1.4
CDC13YDL220C SBH2P52871 88 aa6.3□□□□□ -1.4
CDC13YDL220C YNL165WP53891 406 aa6.3□□□□□ -1.4
CDC13YDL220C IGO1P53897 168 aa6.3□□□□□ -1.4
CDC13YDL220C MET31Q03081 177 aa6.3□□□□□ -1.4
CDC13YDL220C USB1Q12208 290 aaKnown RBP6.3□□□□□ -1.4
CDC13YDL220C MCT1Q12283 360 aa6.3□□□□□ -1.4
CDC13YDL220C PRE5P40302 234 aaKnown RBP6.3□□□□□ -1.4
CDC13YDL220C YFL065CP43539 102 aa6.3□□□□□ -1.4
CDC13YDL220C BUD25P85052 153 aa6.3□□□□□ -1.4
CDC13YDL220C PRP11Q07350 266 aaPredicted RBP6.3□□□□□ -1.4
CDC13YDL220C YPR203WQ08994 102 aa6.3□□□□□ -1.4
CDC13YDL220C HSP10P38910 106 aa6.29□□□□□ -1.4
CDC13YDL220C TTI2P47168 421 aa6.29□□□□□ -1.4
CDC13YDL220C MTM1P53320 366 aa6.29□□□□□ -1.4
CDC13YDL220C DUG3P53871 357 aa6.29□□□□□ -1.4
CDC13YDL220C RPL1AP0CX43 217 aaKnown RBP6.29□□□□□ -1.4
CDC13YDL220C RPL1BP0CX44 217 aaKnown RBP6.29□□□□□ -1.4
CDC13YDL220C DPM1P14020 267 aaKnown RBP6.29□□□□□ -1.4
CDC13YDL220C ADK2P26364 225 aa6.29□□□□□ -1.4
CDC13YDL220C MTR2P34232 184 aaKnown RBP6.29□□□□□ -1.4
CDC13YDL220C PEX7P39108 375 aa6.29□□□□□ -1.4
CDC13YDL220C YIL012WP40551 113 aa6.29□□□□□ -1.4
CDC13YDL220C RNH201P53942 307 aa6.29□□□□□ -1.4
CDC13YDL220C YMR210WQ03649 449 aa6.29□□□□□ -1.4
CDC13YDL220C YPR114WQ06107 315 aa6.29□□□□□ -1.4
CDC13YDL220C RPL7BQ12213 244 aaKnown RBP6.29□□□□□ -1.4
CDC13YDL220C IZH2Q12442 317 aa6.29□□□□□ -1.4
CDC13YDL220C CUP2P15315 225 aa6.29□□□□□ -1.4
CDC13YDL220C PUB1P32588 453 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
CDC13YDL220C YND1P40009 630 aa6.29□□□□□ -1.4
CDC13YDL220C AIR1P40507 360 aaKnown RBP6.29□□□□□ -1.4
CDC13YDL220C YGL235WP53071 178 aa6.29□□□□□ -1.4
CDC13YDL220C PDR17P53844 350 aa6.29□□□□□ -1.4
CDC13YDL220C ELP4Q02884 456 aaKnown RBP6.29□□□□□ -1.4
CDC13YDL220C PRM3Q08931 133 aa6.29□□□□□ -1.4
CDC13YDL220C UTP23Q12339 254 aaKnown RBP6.29□□□□□ -1.4
CDC13YDL220C Q0010Q9ZZX9 128 aa6.29□□□□□ -1.4
CDC13YDL220C MRS4P23500 304 aa6.28□□□□□ -1.4
CDC13YDL220C SOL3P38858 249 aa6.28□□□□□ -1.4
CDC13YDL220C PHS1P40857 217 aa6.28□□□□□ -1.4
CDC13YDL220C YJL028WP47062 111 aa6.28□□□□□ -1.4
CDC13YDL220C MPP6P53725 186 aaPredicted RBP6.28□□□□□ -1.4
CDC13YDL220C YMR074CQ04773 145 aa6.28□□□□□ -1.4
CDC13YDL220C BLS1Q06071 122 aa6.28□□□□□ -1.4
CDC13YDL220C FCY22Q12119 530 aa6.28□□□□□ -1.4
CDC13YDL220C YCL012CQ8J0M4 134 aa6.28□□□□□ -1.4
CDC13YDL220C SEC4P07560 215 aaKnown RBP6.28□□□□□ -1.4
CDC13YDL220C YER134CP40081 178 aa6.28□□□□□ -1.4
CDC13YDL220C ERG26P53199 349 aaKnown RBP6.28□□□□□ -1.4
CDC13YDL220C YGR015CP53208 328 aa6.28□□□□□ -1.4
CDC13YDL220C YML083CQ04526 418 aa6.28□□□□□ -1.4
CDC13YDL220C ELP6Q04868 273 aa6.28□□□□□ -1.4
CDC13YDL220C PER33Q12144 273 aa6.28□□□□□ -1.4
CDC13YDL220C YKR104WP0CE69 306 aa6.27□□□□□ -1.41
CDC13YDL220C ECM33P38248 429 aaKnown RBP6.27□□□□□ -1.41
CDC13YDL220C SSN3P39073 555 aa6.27□□□□□ -1.41
CDC13YDL220C HAC1P41546 238 aa6.27□□□□□ -1.41
CDC13YDL220C SNO3P43544 222 aa6.27□□□□□ -1.41
CDC13YDL220C SNO2P53823 222 aa6.27□□□□□ -1.41
CDC13YDL220C HIP1P06775 603 aa6.27□□□□□ -1.41
CDC13YDL220C STE7P06784 515 aa6.27□□□□□ -1.41
CDC13YDL220C YER190C-BP0CX94 160 aa6.27□□□□□ -1.41
CDC13YDL220C YEL077W-AP0CX95 160 aa6.27□□□□□ -1.41
CDC13YDL220C YGR296C-BP0CX96 160 aa6.27□□□□□ -1.41
CDC13YDL220C YPL283W-BP0CX97 160 aa6.27□□□□□ -1.41
CDC13YDL220C YPR204C-AP0CX98 160 aa6.27□□□□□ -1.41
CDC13YDL220C YKL107WP34251 309 aa6.27□□□□□ -1.41
CDC13YDL220C SDH7Q04401 133 aa6.27□□□□□ -1.41
CDC13YDL220C GAS5Q08193 484 aa6.27□□□□□ -1.41
CDC13YDL220C MCP1Q12106 302 aa6.27□□□□□ -1.41
CDC13YDL220C PCL9Q12477 304 aa6.27□□□□□ -1.41
CDC13YDL220C MRPL24P36525 258 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms