RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W CDC28P00546 298 aaKnown RBP6.85□□□□□ -1.31
NDE2YDL085W VMA16P23968 213 aa6.85□□□□□ -1.31
NDE2YDL085W NUD1P32336 851 aa6.85□□□□□ -1.31
NDE2YDL085W AGA2P32781 87 aa6.85□□□□□ -1.31
NDE2YDL085W FAT1P38225 669 aa6.85□□□□□ -1.31
NDE2YDL085W XBP1P40489 647 aa6.85□□□□□ -1.31
NDE2YDL085W PAU15P40585 124 aa6.85□□□□□ -1.31
NDE2YDL085W IKS1P47042 667 aa6.85□□□□□ -1.31
NDE2YDL085W COX16P47081 118 aa6.85□□□□□ -1.31
NDE2YDL085W PBP1P53297 722 aaKnown RBP6.85□□□□□ -1.31
NDE2YDL085W HOL1P53389 586 aa6.85□□□□□ -1.31
NDE2YDL085W YNR066CP53752 436 aa6.85□□□□□ -1.31
NDE2YDL085W GDH1P07262 454 aaKnown RBP6.84□□□□□ -1.31
NDE2YDL085W CKA1P15790 372 aa6.84□□□□□ -1.31
NDE2YDL085W DAL80P26343 269 aa6.84□□□□□ -1.31
NDE2YDL085W LAC1P28496 418 aa6.84□□□□□ -1.31
NDE2YDL085W YPT31P38555 223 aaKnown RBP6.84□□□□□ -1.31
NDE2YDL085W TOK1P40310 691 aa6.84□□□□□ -1.31
NDE2YDL085W AIR1P40507 360 aaKnown RBP6.84□□□□□ -1.31
NDE2YDL085W DUG1P43616 481 aaKnown RBP6.84□□□□□ -1.31
NDE2YDL085W RPA34P47006 233 aaPredicted RBP6.84□□□□□ -1.31
NDE2YDL085W MRPL19P53875 158 aa6.84□□□□□ -1.31
NDE2YDL085W RSM10Q03201 203 aa6.84□□□□□ -1.31
NDE2YDL085W NUP53Q03790 475 aa6.84□□□□□ -1.31
NDE2YDL085W GMC1Q04399 608 aa6.84□□□□□ -1.31
NDE2YDL085W ASM4Q05166 528 aa6.84□□□□□ -1.31
NDE2YDL085W YDL086WQ07505 273 aa6.84□□□□□ -1.31
NDE2YDL085W YOL029CQ08187 201 aa6.84□□□□□ -1.31
NDE2YDL085W RAD28Q12021 506 aa6.84□□□□□ -1.31
NDE2YDL085W DCN1Q12395 269 aa6.84□□□□□ -1.31
NDE2YDL085W RPS16AP0CX51 143 aaKnown RBP6.83□□□□□ -1.32
NDE2YDL085W RPS16BP0CX52 143 aaKnown RBP6.83□□□□□ -1.32
NDE2YDL085W MDH2P22133 377 aa6.83□□□□□ -1.32
NDE2YDL085W POF1P25576 258 aa6.83□□□□□ -1.32
NDE2YDL085W SSS1P35179 80 aa6.83□□□□□ -1.32
NDE2YDL085W EDS1P38073 919 aa6.83□□□□□ -1.32
NDE2YDL085W AIM3P38266 947 aaKnown RBP6.83□□□□□ -1.32
NDE2YDL085W UBS1P38290 277 aa6.83□□□□□ -1.32
NDE2YDL085W PRS2P38620 318 aaKnown RBP6.83□□□□□ -1.32
NDE2YDL085W STS1P38637 319 aa6.83□□□□□ -1.32
NDE2YDL085W ECO1P43605 281 aa6.83□□□□□ -1.32
NDE2YDL085W ARL3Q02804 198 aa6.83□□□□□ -1.32
NDE2YDL085W RFU1Q08003 200 aa6.83□□□□□ -1.32
NDE2YDL085W YOR015WQ12169 119 aa6.83□□□□□ -1.32
NDE2YDL085W YPR117WQ06116 2489 aa6.83□□□□□ -1.32
NDE2YDL085W MET3P08536 511 aa6.83□□□□□ -1.32
NDE2YDL085W POP5P28005 173 aa6.83□□□□□ -1.32
NDE2YDL085W NTF2P33331 125 aaKnown RBP6.83□□□□□ -1.32
NDE2YDL085W FIG1P38224 298 aa6.83□□□□□ -1.32
NDE2YDL085W ARC40P38328 384 aaKnown RBP6.83□□□□□ -1.32
NDE2YDL085W TRS20P38334 175 aa6.83□□□□□ -1.32
NDE2YDL085W GWT1P47026 490 aa6.83□□□□□ -1.32
NDE2YDL085W MGA1P53050 456 aa6.83□□□□□ -1.32
NDE2YDL085W YGL262WP53054 175 aa6.83□□□□□ -1.32
NDE2YDL085W SKO1Q02100 647 aa6.83□□□□□ -1.32
NDE2YDL085W TRS23Q03784 219 aa6.83□□□□□ -1.32
NDE2YDL085W YDR415CQ04033 374 aaPredicted RBP6.83□□□□□ -1.32
NDE2YDL085W YDR286CQ05530 114 aa6.83□□□□□ -1.32
NDE2YDL085W YLR365WQ7LIF2 110 aa6.83□□□□□ -1.32
NDE2YDL085W RPL25P04456 142 aaKnown RBP6.82□□□□□ -1.32
NDE2YDL085W PEX4P29340 183 aa6.82□□□□□ -1.32
NDE2YDL085W DEG1P31115 442 aaKnown RBP6.82□□□□□ -1.32
NDE2YDL085W GLC7P32598 312 aaKnown RBP6.82□□□□□ -1.32
NDE2YDL085W YNK1P36010 153 aaKnown RBP6.82□□□□□ -1.32
NDE2YDL085W MRPS9P38120 278 aa6.82□□□□□ -1.32
NDE2YDL085W AVT5P38176 459 aa6.82□□□□□ -1.32
NDE2YDL085W SLM6P38343 150 aa6.82□□□□□ -1.32
NDE2YDL085W UME6P39001 836 aa6.82□□□□□ -1.32
NDE2YDL085W YND1P40009 630 aa6.82□□□□□ -1.32
NDE2YDL085W RFC2P40348 353 aa6.82□□□□□ -1.32
NDE2YDL085W YPL108WQ02872 168 aaPredicted RBP6.82□□□□□ -1.32
NDE2YDL085W YMR082CQ04276 118 aa6.82□□□□□ -1.32
NDE2YDL085W YLR118CQ12354 227 aa6.82□□□□□ -1.32
NDE2YDL085W PIG2P40187 538 aa6.81□□□□□ -1.32
NDE2YDL085W MID1P41821 548 aa6.81□□□□□ -1.32
NDE2YDL085W ABM1P47146 123 aa6.81□□□□□ -1.32
NDE2YDL085W ERG25P53045 309 aa6.81□□□□□ -1.32
NDE2YDL085W SLX9P53251 210 aaPredicted RBP6.81□□□□□ -1.32
NDE2YDL085W HOF1Q05080 669 aa6.81□□□□□ -1.32
NDE2YDL085W PML1Q07930 204 aaPredicted RBP6.81□□□□□ -1.32
NDE2YDL085W THI72Q08579 599 aa6.81□□□□□ -1.32
NDE2YDL085W IZH2Q12442 317 aa6.81□□□□□ -1.32
NDE2YDL085W AGC1Q12482 902 aa6.81□□□□□ -1.32
NDE2YDL085W YLL053CP0CD98 152 aa6.8□□□□□ -1.32
NDE2YDL085W MAK32P23060 363 aa6.8□□□□□ -1.32
NDE2YDL085W REC114P32841 428 aa6.8□□□□□ -1.32
NDE2YDL085W YBR013CP38215 129 aa6.8□□□□□ -1.32
NDE2YDL085W POP2P39008 433 aa6.8□□□□□ -1.32
NDE2YDL085W LSM4P40070 187 aaKnown RBP6.8□□□□□ -1.32
NDE2YDL085W YER158CP40095 573 aa6.8□□□□□ -1.32
NDE2YDL085W CCS1P40202 249 aaKnown RBP6.8□□□□□ -1.32
NDE2YDL085W YJR012CP47087 207 aa6.8□□□□□ -1.32
NDE2YDL085W NUP42P49686 430 aaKnown RBP6.8□□□□□ -1.32
NDE2YDL085W TEX1P53851 422 aaKnown RBP6.8□□□□□ -1.32
NDE2YDL085W YMR090WQ04304 227 aaKnown RBP6.8□□□□□ -1.32
NDE2YDL085W HRI1Q05905 244 aaKnown RBP6.8□□□□□ -1.32
NDE2YDL085W YOR186WQ08560 144 aa6.8□□□□□ -1.32
NDE2YDL085W HUT1Q12520 339 aa6.8□□□□□ -1.32
NDE2YDL085W VMA3P25515 160 aa6.79□□□□□ -1.32
NDE2YDL085W MNS1P32906 549 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms