RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W HXT14P42833 540 aa6.89□□□□□ -1.31
ABP1YCR088W MSY1P48527 492 aa6.89□□□□□ -1.31
ABP1YCR088W LCL3P53153 274 aa6.89□□□□□ -1.31
ABP1YCR088W MSO1P53604 210 aaKnown RBP6.89□□□□□ -1.31
ABP1YCR088W FSH2Q05015 223 aa6.89□□□□□ -1.31
ABP1YCR088W MRX9Q07349 420 aaKnown RBP6.89□□□□□ -1.31
ABP1YCR088W NIP7Q08962 181 aaKnown RBP6.89□□□□□ -1.31
ABP1YCR088W REX3Q12090 404 aa6.89□□□□□ -1.31
ABP1YCR088W POP5P28005 173 aa6.88□□□□□ -1.31
ABP1YCR088W RPS0AP32905 252 aaKnown RBP6.88□□□□□ -1.31
ABP1YCR088W SSS1P35179 80 aa6.88□□□□□ -1.31
ABP1YCR088W SLM6P38343 150 aa6.88□□□□□ -1.31
ABP1YCR088W POP2P39008 433 aa6.88□□□□□ -1.31
ABP1YCR088W SLM1P40485 686 aa6.88□□□□□ -1.31
ABP1YCR088W PAU15P40585 124 aa6.88□□□□□ -1.31
ABP1YCR088W PGU1P47180 361 aa6.88□□□□□ -1.31
ABP1YCR088W YGL114WP53134 725 aa6.88□□□□□ -1.31
ABP1YCR088W SLX9P53251 210 aaPredicted RBP6.88□□□□□ -1.31
ABP1YCR088W PBP1P53297 722 aaKnown RBP6.88□□□□□ -1.31
ABP1YCR088W YNR066CP53752 436 aa6.88□□□□□ -1.31
ABP1YCR088W HHT1P61830 136 aa6.88□□□□□ -1.31
ABP1YCR088W HOF1Q05080 669 aa6.88□□□□□ -1.31
ABP1YCR088W HRI1Q05905 244 aaKnown RBP6.88□□□□□ -1.31
ABP1YCR088W YLR456WQ06199 204 aa6.88□□□□□ -1.31
ABP1YCR088W CTR3Q06686 241 aa6.88□□□□□ -1.31
ABP1YCR088W HNT3Q08702 217 aa6.88□□□□□ -1.31
ABP1YCR088W PAR32Q12515 295 aaKnown RBP6.88□□□□□ -1.31
ABP1YCR088W CMC2Q3E7A4 109 aa6.88□□□□□ -1.31
ABP1YCR088W RPL30P14120 105 aaKnown RBP6.87□□□□□ -1.31
ABP1YCR088W PEX4P29340 183 aa6.87□□□□□ -1.31
ABP1YCR088W MKK2P32491 506 aa6.87□□□□□ -1.31
ABP1YCR088W YGL262WP53054 175 aa6.87□□□□□ -1.31
ABP1YCR088W YGL185CP53100 379 aa6.87□□□□□ -1.31
ABP1YCR088W PEF1P53238 335 aa6.87□□□□□ -1.31
ABP1YCR088W ALG12P53730 551 aa6.87□□□□□ -1.31
ABP1YCR088W MEH1Q02205 184 aa6.87□□□□□ -1.31
ABP1YCR088W YPL108WQ02872 168 aaPredicted RBP6.87□□□□□ -1.31
ABP1YCR088W YDL242WQ07746 117 aa6.87□□□□□ -1.31
ABP1YCR088W HUG1Q6Q5K6 68 aa6.87□□□□□ -1.31
ABP1YCR088W YLR365WQ7LIF2 110 aa6.87□□□□□ -1.31
ABP1YCR088W SEC59P20048 519 aa6.87□□□□□ -1.31
ABP1YCR088W RPB7P34087 171 aa6.87□□□□□ -1.31
ABP1YCR088W MIA40P36046 403 aa6.87□□□□□ -1.31
ABP1YCR088W PAC2P39937 518 aa6.87□□□□□ -1.31
ABP1YCR088W RPA34P47006 233 aaPredicted RBP6.87□□□□□ -1.31
ABP1YCR088W ATG21Q02887 496 aa6.87□□□□□ -1.31
ABP1YCR088W YPL039WQ03080 316 aa6.87□□□□□ -1.31
ABP1YCR088W PRR2Q12310 699 aa6.87□□□□□ -1.31
ABP1YCR088W YLR118CQ12354 227 aa6.87□□□□□ -1.31
ABP1YCR088W CDC7P06243 507 aa6.86□□□□□ -1.31
ABP1YCR088W MDH2P22133 377 aa6.86□□□□□ -1.31
ABP1YCR088W SOF1P33750 489 aaKnown RBP6.86□□□□□ -1.31
ABP1YCR088W YBR292CP38357 123 aa6.86□□□□□ -1.31
ABP1YCR088W NOP16P40007 231 aaKnown RBP6.86□□□□□ -1.31
ABP1YCR088W FLX1P40464 311 aa6.86□□□□□ -1.31
ABP1YCR088W RSM23Q01163 450 aa6.86□□□□□ -1.31
ABP1YCR088W MRP51Q02950 344 aa6.86□□□□□ -1.31
ABP1YCR088W PML1Q07930 204 aaPredicted RBP6.86□□□□□ -1.31
ABP1YCR088W YOL118CQ08259 102 aa6.86□□□□□ -1.31
ABP1YCR088W TGS1Q12052 315 aa6.86□□□□□ -1.31
ABP1YCR088W YPR108W-AQ3E7B3 70 aa6.86□□□□□ -1.31
ABP1YCR088W SPO7P18410 259 aa6.85□□□□□ -1.31
ABP1YCR088W YKR073CP36153 106 aa6.85□□□□□ -1.31
ABP1YCR088W MRPL28P36527 147 aa6.85□□□□□ -1.31
ABP1YCR088W AVT5P38176 459 aa6.85□□□□□ -1.31
ABP1YCR088W RTC3P38804 111 aaPredicted RBP6.85□□□□□ -1.31
ABP1YCR088W PHS1P40857 217 aa6.85□□□□□ -1.31
ABP1YCR088W REE1P40893 198 aa6.85□□□□□ -1.31
ABP1YCR088W YNR048WP53740 393 aa6.85□□□□□ -1.31
ABP1YCR088W YMR090WQ04304 227 aaKnown RBP6.85□□□□□ -1.31
ABP1YCR088W YOR186WQ08560 144 aa6.85□□□□□ -1.31
ABP1YCR088W AGC1Q12482 902 aa6.85□□□□□ -1.31
ABP1YCR088W YOR192C-CQ3E736 78 aa6.85□□□□□ -1.31
ABP1YCR088W RPS16AP0CX51 143 aaKnown RBP6.85□□□□□ -1.31
ABP1YCR088W RPS16BP0CX52 143 aaKnown RBP6.85□□□□□ -1.31
ABP1YCR088W SPO13P23624 291 aa6.85□□□□□ -1.31
ABP1YCR088W UPS2P35200 230 aa6.85□□□□□ -1.31
ABP1YCR088W SWD3P38123 315 aa6.85□□□□□ -1.31
ABP1YCR088W PRS2P38620 318 aaKnown RBP6.85□□□□□ -1.31
ABP1YCR088W DIG2Q03373 323 aaKnown RBP6.85□□□□□ -1.31
ABP1YCR088W NCE102Q12207 173 aaRIP-Chip data6.85□□□□□ -1.31not detected
ABP1YCR088W YMR084WA2P2R3 262 aa6.84□□□□□ -1.31
ABP1YCR088W RIP1P08067 215 aa6.84□□□□□ -1.31
ABP1YCR088W YHR214C-DP0CX93 97 aa6.84□□□□□ -1.31
ABP1YCR088W CDC50P25656 391 aa6.84□□□□□ -1.31
ABP1YCR088W YBR096WP38256 230 aa6.84□□□□□ -1.31
ABP1YCR088W YPT31P38555 223 aaKnown RBP6.84□□□□□ -1.31
ABP1YCR088W MGA1P53050 456 aa6.84□□□□□ -1.31
ABP1YCR088W PCP1P53259 346 aa6.84□□□□□ -1.31
ABP1YCR088W CGI121Q03705 181 aaKnown RBP6.84□□□□□ -1.31
ABP1YCR088W TRS23Q03784 219 aa6.84□□□□□ -1.31
ABP1YCR088W DFG5Q05031 458 aa6.84□□□□□ -1.31
ABP1YCR088W YDR286CQ05530 114 aa6.84□□□□□ -1.31
ABP1YCR088W GRE1Q08969 168 aa6.84□□□□□ -1.31
ABP1YCR088W FRE8Q12209 686 aa6.84□□□□□ -1.31
ABP1YCR088W ATG5Q12380 294 aa6.84□□□□□ -1.31
ABP1YCR088W IZH2Q12442 317 aa6.84□□□□□ -1.31
ABP1YCR088W YBR255C-AQ3E776 120 aa6.84□□□□□ -1.31
ABP1YCR088W COX1P00401 534 aa6.83□□□□□ -1.32
ABP1YCR088W AHT1P29589 182 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms