RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	MEH1	Q02205	184 aa		4.27	□□□□□ -1.73
ROT2	YBR229C	CGI121	Q03705	181 aa	Known RBP	4.27	□□□□□ -1.73
ROT2	YBR229C	HED1	Q03937	162 aa		4.27	□□□□□ -1.73
ROT2	YBR229C	YDR387C	Q04162	555 aa		4.27	□□□□□ -1.73
ROT2	YBR229C	YOR015W	Q12169	119 aa		4.27	□□□□□ -1.73
ROT2	YBR229C	USB1	Q12208	290 aa	Known RBP	4.27	□□□□□ -1.73
ROT2	YBR229C	YPR108W-A	Q3E7B3	70 aa		4.27	□□□□□ -1.73
ROT2	YBR229C	PET494	P07390	489 aa	Predicted RBP	4.26	□□□□□ -1.73
ROT2	YBR229C	POP5	P28005	173 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	RPS0A	P32905	252 aa	Known RBP	4.26	□□□□□ -1.73
ROT2	YBR229C	MNS1	P32906	549 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	RPB7	P34087	171 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	YBR013C	P38215	129 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	SEN34	P39707	275 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	SHO1	P40073	367 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	ATF1	P40353	525 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	SKO1	Q02100	647 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	HRI1	Q05905	244 aa	Known RBP	4.26	□□□□□ -1.73
ROT2	YBR229C	RFU1	Q08003	200 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	YOL029C	Q08187	201 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	PDX1	P16451	410 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	SNF5	P18480	905 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	MDH2	P22133	377 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	CCS1	P40202	249 aa	Known RBP	4.26	□□□□□ -1.73
ROT2	YBR229C	SMD3	P43321	101 aa	Known RBP	4.26	□□□□□ -1.73
ROT2	YBR229C	BNS1	P50084	137 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	SLX9	P53251	210 aa	Predicted RBP	4.26	□□□□□ -1.73
ROT2	YBR229C	TEX1	P53851	422 aa	Known RBP	4.26	□□□□□ -1.73
ROT2	YBR229C	TRS23	Q03784	219 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	FSH2	Q05015	223 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	HOF1	Q05080	669 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	TDA6	Q06466	467 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	YDL242W	Q07746	117 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	AGC1	Q12482	902 aa		4.26	□□□□□ -1.73
ROT2	YBR229C	FAS1	P07149	2051 aa	Known RBP	4.26	□□□□□ -1.73
ROT2	YBR229C	SOF1	P33750	489 aa	Known RBP	4.25	□□□□□ -1.73
ROT2	YBR229C	WSS1	P38838	269 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	REE1	P40893	198 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	CUP9	P41817	306 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	DUG1	P43616	481 aa	Known RBP	4.25	□□□□□ -1.73
ROT2	YBR229C	YMR090W	Q04304	227 aa	Known RBP	4.25	□□□□□ -1.73
ROT2	YBR229C	YML053C	Q04978	212 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	YOR032W-A	Q8TGS1	66 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	SPS4	P09937	338 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	FRS1	P15624	595 aa	Known RBP	4.25	□□□□□ -1.73
ROT2	YBR229C	YCR025C	P25352	136 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	EDS1	P38073	919 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	FLO5	P38894	1075 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	PEX7	P39108	375 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	PRM5	P40476	318 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	YPL108W	Q02872	168 aa	Predicted RBP	4.25	□□□□□ -1.73
ROT2	YBR229C	ATG21	Q02887	496 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	GIS1	Q03833	894 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	YOR186W	Q08560	144 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	PRR2	Q12310	699 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	IZH2	Q12442	317 aa		4.25	□□□□□ -1.73
ROT2	YBR229C	YUH1	P35127	236 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	SUR2	P38992	349 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	PBP1	P53297	722 aa	Known RBP	4.24	□□□□□ -1.73
ROT2	YBR229C	ARL3	Q02804	198 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	YLR179C	Q06252	201 aa	Known RBP	4.24	□□□□□ -1.73
ROT2	YBR229C	PML1	Q07930	204 aa	Predicted RBP	4.24	□□□□□ -1.73
ROT2	YBR229C	YOR376W	Q08900	122 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	YPL264C	Q08980	353 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	RPP2B	P02400	110 aa	Known RBP	4.24	□□□□□ -1.73
ROT2	YBR229C	ERV1	P27882	189 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	SSS1	P35179	80 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	STS1	P38637	319 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	TAX4	P47030	604 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	HNT2	P49775	206 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	PAU4	P53427	120 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	SDC1	Q03323	175 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	AVO2	Q04749	426 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	FRE8	Q12209	686 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	HUG1	Q6Q5K6	68 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	LSB5	P25369	354 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	AHT1	P29589	182 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	DEG1	P31115	442 aa	Known RBP	4.24	□□□□□ -1.73
ROT2	YBR229C	YNK1	P36010	153 aa	Known RBP	4.24	□□□□□ -1.73
ROT2	YBR229C	PAC2	P39937	518 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	FYV6	P53913	173 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	YDL129W	Q07555	291 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	MED7	Q08278	222 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	FCY22	Q12119	530 aa		4.24	□□□□□ -1.73
ROT2	YBR229C	FLO9	P39712	1322 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	ERG8	P24521	451 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	UTH1	P36135	365 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	GET2	P40056	285 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	FLX1	P40464	311 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	YGL114W	P53134	725 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	SMM1	P53720	384 aa	Known RBP	4.23	□□□□□ -1.73
ROT2	YBR229C	PAM18	Q07914	168 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	RPS16A	P0CX51	143 aa	Known RBP	4.23	□□□□□ -1.73
ROT2	YBR229C	RPS16B	P0CX52	143 aa	Known RBP	4.23	□□□□□ -1.73
ROT2	YBR229C	UPS2	P35200	230 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	RPL14A	P36105	138 aa	Known RBP	4.23	□□□□□ -1.73
ROT2	YBR229C	SWD3	P38123	315 aa		4.23	□□□□□ -1.73
ROT2	YBR229C	PRS2	P38620	318 aa	Known RBP	4.23	□□□□□ -1.73
ROT2	YBR229C	RPL14B	P38754	138 aa	Known RBP	4.23	□□□□□ -1.73
ROT2	YBR229C	YGL185C	P53100	379 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms