RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C RPL25P04456 142 aaKnown RBP1.44□□□□□ -2.18
RPB5YBR154C RPL9AP05738 191 aaKnown RBP1.44□□□□□ -2.18
RPB5YBR154C GRX2P17695 143 aaKnown RBP1.44□□□□□ -2.18
RPB5YBR154C ATG22P25568 528 aa1.44□□□□□ -2.18
RPB5YBR154C POP4P38336 279 aa1.44□□□□□ -2.18
RPB5YBR154C RMD6P39975 231 aa1.44□□□□□ -2.18
RPB5YBR154C MRPL49P40858 161 aaPredicted RBP1.44□□□□□ -2.18
RPB5YBR154C RPL9BP51401 191 aaKnown RBP1.44□□□□□ -2.18
RPB5YBR154C YGR050CP53231 118 aa1.44□□□□□ -2.18
RPB5YBR154C GGA1Q06336 557 aa1.44□□□□□ -2.18
RPB5YBR154C AKR2Q12013 749 aa1.44□□□□□ -2.18
RPB5YBR154C CDC8P00572 216 aa1.43□□□□□ -2.18
RPB5YBR154C REP2P03872 296 aa1.43□□□□□ -2.18
RPB5YBR154C PUT1P09368 476 aa1.43□□□□□ -2.18
RPB5YBR154C MAG1P22134 296 aaKnown RBP1.43□□□□□ -2.18
RPB5YBR154C SCO1P23833 295 aa1.43□□□□□ -2.18
RPB5YBR154C SEC17P32602 292 aa1.43□□□□□ -2.18
RPB5YBR154C VMA11P32842 164 aa1.43□□□□□ -2.18
RPB5YBR154C PTM1P32857 523 aa1.43□□□□□ -2.18
RPB5YBR154C CLB6P32943 380 aa1.43□□□□□ -2.18
RPB5YBR154C CAF4P36130 643 aa1.43□□□□□ -2.18
RPB5YBR154C SEC72P39742 193 aaKnown RBP1.43□□□□□ -2.18
RPB5YBR154C YER034WP40022 185 aaKnown RBP1.43□□□□□ -2.18
RPB5YBR154C SNX4P47057 423 aa1.43□□□□□ -2.18
RPB5YBR154C YJR146WP47174 117 aa1.43□□□□□ -2.18
RPB5YBR154C RTC4P53850 401 aa1.43□□□□□ -2.18
RPB5YBR154C COG5P53951 403 aa1.43□□□□□ -2.18
RPB5YBR154C GAS3Q03655 524 aa1.43□□□□□ -2.18
RPB5YBR154C YET3Q07451 203 aa1.43□□□□□ -2.18
RPB5YBR154C YHR214C-EQ8TGK0 99 aa1.43□□□□□ -2.18
RPB5YBR154C MSW1P04803 379 aa1.42□□□□□ -2.18
RPB5YBR154C MRS1P07266 363 aa1.42□□□□□ -2.18
RPB5YBR154C YLR156WP0CE96 114 aa1.42□□□□□ -2.18
RPB5YBR154C YLR159WP0CE97 114 aa1.42□□□□□ -2.18
RPB5YBR154C YLR161WP0CE98 114 aa1.42□□□□□ -2.18
RPB5YBR154C KSS1P14681 368 aa1.42□□□□□ -2.18
RPB5YBR154C UTP30P36144 274 aaKnown RBP1.42□□□□□ -2.18
RPB5YBR154C SKG1P36169 355 aa1.42□□□□□ -2.18
RPB5YBR154C SHG1P38337 142 aa1.42□□□□□ -2.18
RPB5YBR154C AST2P39945 430 aaKnown RBP1.42□□□□□ -2.18
RPB5YBR154C HMF1P40037 129 aaKnown RBP1.42□□□□□ -2.18
RPB5YBR154C POG1P40473 351 aa1.42□□□□□ -2.18
RPB5YBR154C ERG10P41338 398 aaKnown RBP1.42□□□□□ -2.18
RPB5YBR154C AIM25P47140 327 aa1.42□□□□□ -2.18
RPB5YBR154C DSK2P48510 373 aa1.42□□□□□ -2.18
RPB5YBR154C COS6P53344 381 aa1.42□□□□□ -2.18
RPB5YBR154C SLM2P53955 656 aa1.42□□□□□ -2.18
RPB5YBR154C ARO80Q04052 950 aa1.42□□□□□ -2.18
RPB5YBR154C TRM12Q04235 462 aa1.42□□□□□ -2.18
RPB5YBR154C SUE1Q06524 206 aa1.42□□□□□ -2.18
RPB5YBR154C ARR2Q06597 130 aa1.42□□□□□ -2.18
RPB5YBR154C RDS3Q06835 107 aaPredicted RBP1.42□□□□□ -2.18
RPB5YBR154C YOL160WQ08321 113 aa1.42□□□□□ -2.18
RPB5YBR154C VPS68Q12016 184 aa1.42□□□□□ -2.18
RPB5YBR154C YPL162CQ12042 273 aa1.42□□□□□ -2.18
RPB5YBR154C USB1Q12208 290 aaKnown RBP1.42□□□□□ -2.18
RPB5YBR154C MHT1Q12525 324 aa1.42□□□□□ -2.18
RPB5YBR154C QCR6P00127 147 aa1.41□□□□□ -2.18
RPB5YBR154C SIR2P06700 562 aa1.41□□□□□ -2.18
RPB5YBR154C CNB1P25296 175 aa1.41□□□□□ -2.18
RPB5YBR154C MED6P38782 295 aa1.41□□□□□ -2.18
RPB5YBR154C PDS1P40316 373 aaPredicted RBP1.41□□□□□ -2.18
RPB5YBR154C BAT2P47176 376 aaKnown RBP1.41□□□□□ -2.18
RPB5YBR154C SWP1Q02795 286 aa1.41□□□□□ -2.18
RPB5YBR154C YDR249CQ03787 373 aa1.41□□□□□ -2.18
RPB5YBR154C GIM5Q04493 163 aa1.41□□□□□ -2.18
RPB5YBR154C NEJ1Q06148 342 aa1.41□□□□□ -2.18
RPB5YBR154C NOC4Q06512 552 aaPredicted RBP1.41□□□□□ -2.18
RPB5YBR154C YOR283WQ12040 230 aaKnown RBP1.41□□□□□ -2.18
RPB5YBR154C MCP1Q12106 302 aa1.41□□□□□ -2.18
RPB5YBR154C CMC2Q3E7A4 109 aa1.41□□□□□ -2.18
RPB5YBR154C IGO2Q9P305 131 aa1.41□□□□□ -2.18
RPB5YBR154C IKI3Q06706 1349 aaKnown RBP1.4□□□□□ -2.18
RPB5YBR154C RPL35AP0CX84 120 aaKnown RBP1.4□□□□□ -2.19
RPB5YBR154C RPL35BP0CX85 120 aaKnown RBP1.4□□□□□ -2.19
RPB5YBR154C URA5P13298 226 aaKnown RBP1.4□□□□□ -2.19
RPB5YBR154C RPB3P16370 318 aaKnown RBP1.4□□□□□ -2.19
RPB5YBR154C BET1P22804 142 aa1.4□□□□□ -2.19
RPB5YBR154C VPS51P36116 164 aa1.4□□□□□ -2.19
RPB5YBR154C YHR180WP38868 163 aa1.4□□□□□ -2.19
RPB5YBR154C PRM10P42946 383 aa1.4□□□□□ -2.19
RPB5YBR154C UBC12P52491 188 aa1.4□□□□□ -2.19
RPB5YBR154C AIF1P52923 378 aa1.4□□□□□ -2.19
RPB5YBR154C YGR219WP53307 113 aa1.4□□□□□ -2.19
RPB5YBR154C YNL184CP53876 108 aa1.4□□□□□ -2.19
RPB5YBR154C NRK1P53915 240 aa1.4□□□□□ -2.19
RPB5YBR154C PRM15Q03262 622 aa1.4□□□□□ -2.19
RPB5YBR154C YLR036CQ07986 203 aa1.4□□□□□ -2.19
RPB5YBR154C YOL024WQ08172 172 aa1.4□□□□□ -2.19
RPB5YBR154C RIO1Q12196 484 aaKnown RBP1.4□□□□□ -2.19
RPB5YBR154C EMC6Q12431 108 aa1.4□□□□□ -2.19
RPB5YBR154C TSC3Q3E790 80 aa1.4□□□□□ -2.19
RPB5YBR154C YDL085C-AQ3E7B7 68 aaKnown RBP1.4□□□□□ -2.19
RPB5YBR154C YFR032C-BQ8TGU2 87 aa1.4□□□□□ -2.19
RPB5YBR154C MBF1O14467 151 aaKnown RBP1.39□□□□□ -2.19
RPB5YBR154C SNF4P12904 322 aa1.39□□□□□ -2.19
RPB5YBR154C GCY1P14065 312 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
RPB5YBR154C FBA1P14540 359 aaKnown RBP1.39□□□□□ -2.19
RPB5YBR154C CKS1P20486 150 aaKnown RBP1.39□□□□□ -2.19
RPB5YBR154C TAH1P25638 111 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms