RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 UBR7Q8N806 425 aa15.3■□□□□ 0.04
PHACTR4-209ENST00000633371 BEST2Q8NFU1 509 aa15.3■□□□□ 0.04
PHACTR4-209ENST00000633371 ARID3AQ99856 593 aa15.3■□□□□ 0.04
PHACTR4-209ENST00000633371 PAAF1Q9BRP4 392 aa15.3■□□□□ 0.04
PHACTR4-209ENST00000633371 UBE2TQ9NPD8 197 aaPredicted RBP15.3■□□□□ 0.04
PHACTR4-209ENST00000633371 UBN1Q9NPG3 1134 aa15.3■□□□□ 0.04
PHACTR4-209ENST00000633371 POLIQ9UNA4 740 aa15.3■□□□□ 0.04
PHACTR4-209ENST00000633371 INPP5FQ9Y2H2 1132 aa15.3■□□□□ 0.04
PHACTR4-209ENST00000633371 AKR1B15C9JRZ8 316 aaPredicted RBP15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 SPTLC1O15269 473 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 STAU1O95793 577 aaKnown RBP15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 THP07101 528 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 PNMA6AP0CW24 399 aaPredicted RBP15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 TRIM21P19474 475 aaKnown RBP15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 FECHP22830 423 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 KRT9P35527 623 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 WDR5P61964 334 aaKnown RBP15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 NOP14P78316 857 aaKnown RBP15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 RBP5P82980 135 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 ZBED6P86452 979 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 DSC1Q08554 894 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 CETN1Q12798 172 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 PPIGQ13427 754 aaKnown RBP eCLIP15.29■□□□□ 0.042e-8■□□□□ 9.7
PHACTR4-209ENST00000633371 TRIM14Q14142 442 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 SGSM1Q2NKQ1 1148 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 NOMO2Q5JPE7 1267 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 WDR59Q6PJI9 974 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 ZNF365Q70YC5 407 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 TMCO2Q7Z6W1 182 aaPredicted RBP15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 PPFIBP1Q86W92 1011 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 GPIHBP1Q8IV16 184 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 RPUSD2Q8IZ73 545 aaKnown RBP15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 RABGGTAQ92696 567 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 NT5C1BQ96P26 610 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 DNAJC7Q99615 494 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 HTATIP2Q9BUP3 242 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 SDCBP2Q9H190 292 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 KCNF1Q9H3M0 494 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 VRTNQ9H8Y1 702 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 HCSTQ9UBK5 93 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 PCDHB7Q9Y5E2 793 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 VWA8A3KMH1 1905 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 TSC2P49815 1807 aa15.29■□□□□ 0.04
PHACTR4-209ENST00000633371 FOXN3O00409 490 aaPredicted RBP15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 EVI5O60447 810 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 PFKMP08237 780 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 KRT19P08727 400 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 ACO1P21399 889 aaKnown RBP15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 FPGSQ05932 587 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 GRIK3Q13003 919 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 TRPC3Q13507 836 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 DRAP1Q14919 205 aaPredicted RBP15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 GLB1LQ6UWU2 654 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 TNS4Q8IZW8 715 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 C3orf58Q8NDZ4 430 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 OLIG1Q8TAK6 271 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 TOP1MTQ969P6 601 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 HPDLQ96IR7 371 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 ZNF830Q96NB3 372 aaPredicted RBP15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 RPS6KC1Q96S38 1066 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.28■□□□□ 0.047e-6■□□□□ 9.4
PHACTR4-209ENST00000633371 STK33Q9BYT3 514 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 RC3H2Q9HBD1 1191 aaKnown RBP15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 LUC7L2Q9Y383 392 aaKnown RBP15.28■□□□□ 0.04
PHACTR4-209ENST00000633371 GBF1Q92538 1859 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 LRRC53A6NM62 1247 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 F8W810 466 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 DGKIO75912 1065 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 ATICP31939 592 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 HNRNPH3P31942 346 aaKnown RBP15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 ASPAP45381 313 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 CLCNKBP51801 687 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 GCNT1Q02742 428 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 ARHGAP44Q17R89 818 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 ZNF699Q32M78 642 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 OTOP2Q7RTS6 562 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 IRF2BP2Q7Z5L9 587 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 COLGALT2Q8IYK4 626 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 PPM1KQ8N3J5 372 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 LRRC52Q8N7C0 313 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 SHC3Q92529 594 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 TAF4BQ92750 862 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 ZNF689Q96CS4 500 aaPredicted RBP15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 IQCDQ96DY2 449 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 BCO2Q9BYV7 579 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 NRDE2Q9H7Z3 1164 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 ABHD10Q9NUJ1 306 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 SLC38A7Q9NVC3 462 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 CXXC1Q9P0U4 656 aaPredicted RBP15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 PRKAG2Q9UGJ0 569 aa15.27■□□□□ 0.04
PHACTR4-209ENST00000633371 CASTOR2A6NHX0 329 aa15.26■□□□□ 0.03
PHACTR4-209ENST00000633371 F8VZ95 297 aa15.26■□□□□ 0.03
PHACTR4-209ENST00000633371 XPOTO43592 962 aaKnown RBP15.26■□□□□ 0.03
PHACTR4-209ENST00000633371 BAIAP3O94812 1187 aa15.26■□□□□ 0.03
PHACTR4-209ENST00000633371 UPP2O95045 317 aa15.26■□□□□ 0.03
PHACTR4-209ENST00000633371 FGBP02675 491 aa15.26■□□□□ 0.03
PHACTR4-209ENST00000633371 CDH8P55286 799 aa15.26■□□□□ 0.03
PHACTR4-209ENST00000633371 GSDMDP57764 484 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms