RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MCM4P33991 863 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 OR1D2P34982 312 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 AARSP49588 968 aaKnown RBP eCLIP24.26■■□□□ 1.47
SF1-220ENST00000626028 ACOT2P49753 483 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 KCNA1Q09470 495 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 MRPL58Q14197 206 aaKnown RBP24.26■■□□□ 1.47
SF1-220ENST00000626028 TMEM132DQ14C87 1099 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 TMEM31Q5JXX7 168 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 VARS2Q5ST30 1063 aaKnown RBP24.26■■□□□ 1.47
SF1-220ENST00000626028 LIN9Q5TKA1 542 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 CCDC149Q6ZUS6 474 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 UNC13DQ70J99 1090 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 OTOP3Q7RTS5 596 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 CEP57L1Q8IYX8 460 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 STAMQ92783 540 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 PRKD2Q9BZL6 878 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 MAFFQ9ULX9 164 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 UBE4BO95155 1302 aa24.26■■□□□ 1.47
SF1-220ENST00000626028 ARHGEF37A1IGU5 675 aa24.25■■□□□ 1.47
SF1-220ENST00000626028 IGFBP6P24592 240 aaPredicted RBP24.25■■□□□ 1.47
SF1-220ENST00000626028 SNRPFP62306 86 aaKnown RBP24.25■■□□□ 1.47
SF1-220ENST00000626028 EHHADHQ08426 723 aa24.25■■□□□ 1.47
SF1-220ENST00000626028 JADE1Q6IE81 842 aa24.25■■□□□ 1.47
SF1-220ENST00000626028 CRELD2Q6UXH1 353 aaPredicted RBP24.25■■□□□ 1.47
SF1-220ENST00000626028 GLYCTKQ8IVS8 523 aa24.25■■□□□ 1.47
SF1-220ENST00000626028 TDRD5Q8NAT2 981 aaKnown RBP24.25■■□□□ 1.47
SF1-220ENST00000626028 ZNF461Q8TAF7 563 aa24.25■■□□□ 1.47
SF1-220ENST00000626028 ACSF2Q96CM8 615 aaPredicted RBP24.25■■□□□ 1.47
SF1-220ENST00000626028 WDR6Q9NNW5 1121 aaKnown RBP24.25■■□□□ 1.47
SF1-220ENST00000626028 PCDHB8Q9UN66 801 aa24.25■■□□□ 1.47
SF1-220ENST00000626028 TISP43B9A030 160 aa24.24■■□□□ 1.47
SF1-220ENST00000626028 TBC1D4O60343 1298 aa24.24■■□□□ 1.47
SF1-220ENST00000626028 FAM26FQ5R3K3 315 aa24.24■■□□□ 1.47
SF1-220ENST00000626028 KANK3Q6NY19 840 aa24.24■■□□□ 1.47
SF1-220ENST00000626028 EPM2AIP1Q7L775 607 aaPredicted RBP24.24■■□□□ 1.47
SF1-220ENST00000626028 SMG7Q92540 1137 aaKnown RBP24.24■■□□□ 1.47
SF1-220ENST00000626028 EDAQ92838 391 aa24.24■■□□□ 1.47
SF1-220ENST00000626028 ZNF707Q96C28 371 aaPredicted RBP24.24■■□□□ 1.47
SF1-220ENST00000626028 MUTYHQ9UIF7 546 aa24.24■■□□□ 1.47
SF1-220ENST00000626028 CDH22Q9UJ99 828 aa24.24■■□□□ 1.47
SF1-220ENST00000626028 CDY1Q9Y6F8 540 aa24.24■■□□□ 1.47
SF1-220ENST00000626028 FAM237AA0A1B0GTK4 181 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 PRR33A8MZF0 331 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 I3L4J1 428 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 WEE2P0C1S8 567 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 SPATA31D3P0C874 917 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 NUCB2P80303 420 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 SPAG1Q07617 926 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 SPATA31D4Q6ZUB0 917 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 ZNF507Q8TCN5 953 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 FAM212AQ96EL1 285 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 TSHZ2Q9NRE2 1034 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 HPSEQ9Y251 543 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 TSC2P49815 1807 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 TECTAO75443 2155 aa24.23■■□□□ 1.47
SF1-220ENST00000626028 ANO9A1A5B4 782 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 ADAM12O43184 909 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 EXTL3O43909 919 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 RFPL2O75678 378 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 ABLIM3O94929 683 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 OAZ2O95190 189 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 NFICP08651 508 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 PTPN21Q16825 1174 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 PPM1LQ5SGD2 360 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 C9orf57Q5W0N0 161 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 TPGS2Q68CL5 300 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 ZNF280DQ6N043 979 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 BRSK2Q8IWQ3 736 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 FAM213AQ9BRX8 229 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 FGFBP2Q9BYJ0 223 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 PIDD1Q9HB75 910 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 KIAA1586Q9HCI6 787 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 C11orf16Q9NQ32 467 aa24.22■■□□□ 1.47
SF1-220ENST00000626028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.22■■□□□ 1.47
SF1-220ENST00000626028 CGNQ9P2M7 1197 aaKnown RBP24.22■■□□□ 1.47
SF1-220ENST00000626028 CLUHO75153 1309 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 A0A1W2PQ27 194 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 A0A1W2PQ64 194 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 A0A1W2PQD8 194 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 C2CD4DB7Z1M9 353 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 PIRO00625 290 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 ACTN4O43707 911 aaKnown RBP24.21■■□□□ 1.47
SF1-220ENST00000626028 XYLBO75191 536 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 PRPF6O94906 941 aaKnown RBP24.21■■□□□ 1.47
SF1-220ENST00000626028 C8AP07357 584 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 PFKFB1P16118 471 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 TYMPP19971 482 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 LILRA4P59901 499 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 YWHAHQ04917 246 aaPredicted RBP24.21■■□□□ 1.47
SF1-220ENST00000626028 ARMCX5Q6P1M9 558 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 IKZF4Q9H2S9 585 aa24.21■■□□□ 1.47
SF1-220ENST00000626028 NOTCH4Q99466 2003 aa24.2■■□□□ 1.47
SF1-220ENST00000626028 ATF2P15336 505 aa24.2■■□□□ 1.46
SF1-220ENST00000626028 ZXDAP98168 799 aa24.2■■□□□ 1.46
SF1-220ENST00000626028 ROR1Q01973 937 aa24.2■■□□□ 1.46
SF1-220ENST00000626028 PSMD2Q13200 908 aa24.2■■□□□ 1.46
SF1-220ENST00000626028 CTXN3Q4LDR2 81 aa24.2■■□□□ 1.46
SF1-220ENST00000626028 RSPO2Q6UXX9 243 aaPredicted RBP24.2■■□□□ 1.46
SF1-220ENST00000626028 UBALD2Q8IYN6 164 aa24.2■■□□□ 1.46
SF1-220ENST00000626028 CACTINQ8WUQ7 758 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms