RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 RHOT1Q8IXI2 618 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 ZFP28Q8NHY6 868 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 SLC35B2Q8TB61 432 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 ADAM2Q99965 735 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 RNF181Q9P0P0 153 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 ZNF70Q9UC06 446 aaPredicted RBP4.43□□□□□ -1.7
VBP1-204ENST00000625964 SHROOM4Q9ULL8 1493 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 WNT10BO00744 389 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 GPR32O75388 356 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 C1QL1O75973 258 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 SNRPA1P09661 255 aaKnown RBP4.42□□□□□ -1.7
VBP1-204ENST00000625964 FPR1P21462 350 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 MGAT1P26572 445 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 GUCY1A2P33402 732 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 ALDH1A3P47895 512 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 IGBP1P78318 339 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 KRT85P78386 507 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 SIM1P81133 766 aaPredicted RBP4.42□□□□□ -1.7
VBP1-204ENST00000625964 BMT2Q1RMZ1 405 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 RRP12Q5JTH9 1297 aaKnown RBP4.42□□□□□ -1.7
VBP1-204ENST00000625964 ZNF425Q6IV72 752 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 ARHGEF25Q86VW2 580 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 SH2D3CQ8N5H7 860 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 SPATA3Q8NHX4 192 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 WASF1Q92558 559 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 RAB24Q969Q5 203 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 PHACTR3Q96KR7 559 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 MRI1Q9BV20 369 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 MANSC1Q9H8J5 431 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 RUVBL1Q9Y265 456 aaKnown RBP4.42□□□□□ -1.7
VBP1-204ENST00000625964 SIK3Q9Y2K2 1263 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 ATRNL1Q5VV63 1379 aa4.42□□□□□ -1.7
VBP1-204ENST00000625964 CGB1A6NKQ9 187 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 PJA2O43164 708 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 SPDEFO95238 335 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 ATP5JP18859 108 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 FDXRP22570 491 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 PCSK1P29120 753 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 CLRN1P58418 232 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 ODF1Q14990 250 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 UAP1L1Q3KQV9 507 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 ATXN7L2Q5T6C5 722 aaPredicted RBP4.41□□□□□ -1.7
VBP1-204ENST00000625964 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 SYT12Q8IV01 421 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 HDAC10Q969S8 669 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 CYFIP2Q96F07 1278 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 SLC13A1Q9BZW2 595 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 SPEF1Q9Y4P9 236 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 ACTL7AQ9Y615 435 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 FPGT-TNNI3KV9GXZ4 949 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 ARHGEF17Q96PE2 2063 aaPredicted RBP4.41□□□□□ -1.7
VBP1-204ENST00000625964 MYBBP1AQ9BQG0 1328 aaKnown RBP4.41□□□□□ -1.7
VBP1-204ENST00000625964 LRRC3CA6NJW4 275 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 MARCH11A6NNE9 402 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 TEX33O43247 280 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 SNUPNO95149 360 aaKnown RBP4.41□□□□□ -1.7
VBP1-204ENST00000625964 FOSP01100 380 aaPredicted RBP4.41□□□□□ -1.7
VBP1-204ENST00000625964 ITGAMP11215 1152 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 WASP42768 502 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 EXOSC10Q01780 885 aaKnown RBP4.41□□□□□ -1.7
VBP1-204ENST00000625964 PDCD4Q53EL6 469 aaKnown RBP4.41□□□□□ -1.7
VBP1-204ENST00000625964 RSPH3Q86UC2 560 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 ZBTB46Q86UZ6 589 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 DRC7Q8IY82 874 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 SLC44A3Q8N4M1 653 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 ZGPATQ8N5A5 531 aaKnown RBP4.41□□□□□ -1.7
VBP1-204ENST00000625964 CASKIN2Q8WXE0 1202 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 KRTAP4-4Q9BYR3 166 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 TDP1Q9NUW8 608 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 SLC17A6Q9P2U8 582 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 PCDHA13Q9Y5I0 950 aa4.41□□□□□ -1.7
VBP1-204ENST00000625964 CCDC154A6NI56 674 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 AMY1AP04745 511 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 DDCP20711 480 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 RECQLP46063 649 aaPredicted RBP4.4□□□□□ -1.71
VBP1-204ENST00000625964 CHN2P52757 468 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 OCA2Q04671 838 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 RESTQ13127 1097 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 MTM1Q13496 603 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 C3orf36Q3SXR2 165 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 ZNF529Q6P280 563 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 CHMP4CQ96CF2 233 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 TMX3Q96JJ7 454 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 DDX56Q9NY93 547 aaKnown RBP4.4□□□□□ -1.71
VBP1-204ENST00000625964 SERPINB13Q9UIV8 391 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 LIMCH1Q9UPQ0 1083 aa4.4□□□□□ -1.71
VBP1-204ENST00000625964 PNPLA7Q6ZV29 1317 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 SALL3Q9BXA9 1300 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 HTRA2O43464 458 aaPredicted RBP4.39□□□□□ -1.71
VBP1-204ENST00000625964 CDKL5O76039 1030 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 CBSLP0DN79 551 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 CBSP35520 551 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 NEK2P51955 445 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 ADKP55263 362 aaKnown RBP4.39□□□□□ -1.71
VBP1-204ENST00000625964 CREMQ03060 361 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 IL10RAQ13651 578 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 OTUD7BQ6GQQ9 843 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 MED25Q71SY5 747 aa4.39□□□□□ -1.71
VBP1-204ENST00000625964 PTF1AQ7RTS3 328 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms