RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 KANK3Q6NY19 840 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 CNNM4Q6P4Q7 775 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 CD300LGQ6UXG3 332 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 STXBP4Q6ZWJ1 553 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 TMEM130Q8N3G9 435 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 GLIS3Q8NEA6 775 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 PIK3R5Q8WYR1 880 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 C7orf25Q9BPX7 421 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 SFXN1Q9H9B4 322 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 SERTAD1Q9UHV2 236 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 UBQLN1Q9UMX0 589 aaKnown RBP17.38■□□□□ 0.37
BRCA1-228ENST00000618469 NUB1Q9Y5A7 615 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 STYXL1Q9Y6J8 313 aa17.38■□□□□ 0.37
BRCA1-228ENST00000618469 TRAPPC3O43617 180 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 ACTN4O43707 911 aaKnown RBP17.37■□□□□ 0.37
BRCA1-228ENST00000618469 NFICP08651 508 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 TKTP29401 623 aaKnown RBP17.37■□□□□ 0.37
BRCA1-228ENST00000618469 ADSSP30520 456 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 RPL9P32969 192 aaKnown RBP17.37■□□□□ 0.37
BRCA1-228ENST00000618469 NUCB2P80303 420 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 CES5AQ6NT32 575 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 UNC13DQ70J99 1090 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 GPR65Q8IYL9 337 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 FEZF2Q8TBJ5 459 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 POMKQ9H5K3 350 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 FNIP2Q9P278 1114 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 DENND4AQ7Z401 1863 aa17.37■□□□□ 0.37
BRCA1-228ENST00000618469 DMDP11532 3685 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 PROB1E7EW31 1015 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 XPOTO43592 962 aaKnown RBP17.36■□□□□ 0.37
BRCA1-228ENST00000618469 SLFN14P0C7P3 912 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 FGFR3P22607 806 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 MCM4P33991 863 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 GUCY2FP51841 1108 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 FOXK2Q01167 660 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 ITIH3Q06033 890 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 CUL4BQ13620 913 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 POSTNQ15063 836 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 JADE1Q6IE81 842 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 PDXDC1Q6P996 788 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 ELMSAN1Q6PJG2 1045 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 TMC5Q6UXY8 1006 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 PALB2Q86YC2 1186 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 FSIP1Q8NA03 581 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 LNX1Q8TBB1 728 aaPredicted RBP17.36■□□□□ 0.37
BRCA1-228ENST00000618469 NOC3LQ8WTT2 800 aaKnown RBP17.36■□□□□ 0.37
BRCA1-228ENST00000618469 SAAL1Q96ER3 474 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 ADAM7Q9H2U9 754 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 TMEM206Q9H813 350 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 HPSEQ9Y251 543 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.36■□□□□ 0.37
BRCA1-228ENST00000618469 DCHS1Q96JQ0 3298 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 C2orf16Q68DN1 1984 aa17.36■□□□□ 0.37
BRCA1-228ENST00000618469 EIF3DO15371 548 aaKnown RBP eCLIP17.35■□□□□ 0.37
BRCA1-228ENST00000618469 TGM5O43548 720 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 NBL1P41271 181 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 SYKP43405 635 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 MTMR3Q13615 1198 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 TMEM132DQ14C87 1099 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 ARMCX5Q6P1M9 558 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 CD302Q8IX05 232 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 ADSSL1Q8N142 457 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 CBWD1Q9BRT8 395 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 FAM213AQ9BRX8 229 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 LIMD1Q9UGP4 676 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 SORCS3Q9UPU3 1222 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 UBE4BO95155 1302 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 TSC2P49815 1807 aa17.35■□□□□ 0.37
BRCA1-228ENST00000618469 A0A1W2PQ27 194 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 A0A1W2PQ64 194 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 A0A1W2PQD8 194 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 TULP1O00294 542 aaPredicted RBP17.34■□□□□ 0.37
BRCA1-228ENST00000618469 ADRB2P07550 413 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 SPATA31D3P0C874 917 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 CYP3A5P20815 502 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 GARTP22102 1010 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 LRPAP1P30533 357 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 MTHFRP42898 656 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 ID4P47928 161 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 NDUFA8P51970 172 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 EHHADHQ08426 723 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 ZBTB6Q15916 424 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 CRELD2Q6UXH1 353 aaPredicted RBP17.34■□□□□ 0.37
BRCA1-228ENST00000618469 SPATA31D4Q6ZUB0 917 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 ZSWIM2Q8NEG5 633 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 BEST2Q8NFU1 509 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 NKD2Q969F2 451 aaPredicted RBP17.34■□□□□ 0.37
BRCA1-228ENST00000618469 PAGE5Q96GU1 130 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 NECTIN4Q96NY8 510 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 TSPAN18Q96SJ8 248 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 CLSTN3Q9BQT9 956 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 MFSD1Q9H3U5 465 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 GOLPH3LQ9H4A5 285 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 MTRRQ9UBK8 725 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 DPP7Q9UHL4 492 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 USP25Q9UHP3 1055 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 NR2E1Q9Y466 385 aa17.34■□□□□ 0.37
BRCA1-228ENST00000618469 MTCL1Q9Y4B5 1905 aaKnown RBP17.33■□□□□ 0.37
BRCA1-228ENST00000618469 PVALEFA0A1B0GWK0 134 aa17.33■□□□□ 0.36
BRCA1-228ENST00000618469 GOLGA8IPA6NC78 632 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms