RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 GTF3C2Q8WUA4 911 aaPredicted RBP10.65□□□□□ -0.71
GGA3-221ENST00000614198 TCP11Q8WWU5 503 aa10.65□□□□□ -0.71
GGA3-221ENST00000614198 ZNF516Q92618 1163 aa10.65□□□□□ -0.71
GGA3-221ENST00000614198 SEC16BQ96JE7 1060 aa10.65□□□□□ -0.71
GGA3-221ENST00000614198 KDM4CQ9H3R0 1056 aa10.65□□□□□ -0.71
GGA3-221ENST00000614198 NHEJ1Q9H9Q4 299 aaPredicted RBP10.65□□□□□ -0.71
GGA3-221ENST00000614198 C6orf222P0C671 652 aaPredicted RBP10.64□□□□□ -0.71
GGA3-221ENST00000614198 FMO5P49326 533 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 VEGFBP49765 207 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 MARSP56192 900 aaKnown RBP10.64□□□□□ -0.71
GGA3-221ENST00000614198 EXOC3L4Q17RC7 722 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 EEF1DP3Q658K8 133 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 PHLDB3Q6NSJ2 640 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 PPP4R3CPQ6ZMV5 832 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 PLPPR4Q7Z2D5 763 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 ARHGEF19Q8IW93 802 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 CCDC170Q8IYT3 715 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 TRIM58Q8NG06 486 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 CD99L2Q8TCZ2 262 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 ALS2CR12Q96Q35 445 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 TCHPQ9BT92 498 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 IFIH1Q9BYX4 1025 aaKnown RBP10.64□□□□□ -0.71
GGA3-221ENST00000614198 TSGA10Q9BZW7 698 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 EPB41L5Q9HCM4 733 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 GDF3Q9NR23 364 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 BUB1BO60566 1050 aaPredicted RBP10.64□□□□□ -0.71
GGA3-221ENST00000614198 PECAM1P16284 738 aaPredicted RBP10.64□□□□□ -0.71
GGA3-221ENST00000614198 TCP1P17987 556 aaKnown RBP10.64□□□□□ -0.71
GGA3-221ENST00000614198 VAMP7P51809 220 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 SREBF2Q12772 1141 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 PAK2Q13177 524 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 RIPK1Q13546 671 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 CAPRIN2Q6IMN6 1127 aaKnown RBP10.64□□□□□ -0.71
GGA3-221ENST00000614198 SPOPLQ6IQ16 392 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 KLHL7Q8IXQ5 586 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 CACNA2D3Q8IZS8 1091 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 SPAG5Q96R06 1193 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 GANQ9H2C0 597 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 IFT122Q9HBG6 1241 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 C15orf41Q9Y2V0 281 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 C5orf42Q9H799 3197 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 RBM47A0AV96 593 aaKnown RBP10.64□□□□□ -0.71
GGA3-221ENST00000614198 UCHL3P15374 230 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 BYSLQ13895 437 aaKnown RBP10.64□□□□□ -0.71
GGA3-221ENST00000614198 CXCL17Q6UXB2 119 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 THNSL1Q8IYQ7 743 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 KCTD17Q8N5Z5 321 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 PARD3BQ8TEW8 1205 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 CCT6BQ92526 530 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 STAMBPL1Q96FJ0 436 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 OSBPL9Q96SU4 736 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 NUP58Q9BVL2 599 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 TMEM206Q9H813 350 aa10.64□□□□□ -0.71
GGA3-221ENST00000614198 ZSCAN5CA6NGD5 496 aaPredicted RBP10.63□□□□□ -0.71
GGA3-221ENST00000614198 TREHO43280 583 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 MSCO60682 206 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 FAM153BP0C7A2 387 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 EIF4A3P38919 411 aaKnown RBP10.63□□□□□ -0.71
GGA3-221ENST00000614198 MYO1EQ12965 1108 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 GRIK4Q16099 956 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 QPCTQ16769 361 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 FAM153CQ494X1 144 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 CPLX4Q7Z7G2 160 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 CCHCR1Q8TD31 782 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 DHX38Q92620 1227 aaKnown RBP10.63□□□□□ -0.71
GGA3-221ENST00000614198 HVCN1Q96D96 273 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 TMEM117Q9H0C3 514 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 TMBIM4Q9HC24 238 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 CHORDC1Q9UHD1 332 aaPredicted RBP10.63□□□□□ -0.71
GGA3-221ENST00000614198 FAM153AQ9UHL3 310 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 ADCY3O60266 1144 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 SMNDC1O75940 238 aaKnown RBP eCLIP10.63□□□□□ -0.71
GGA3-221ENST00000614198 CACNB2Q08289 660 aaPredicted RBP10.63□□□□□ -0.71
GGA3-221ENST00000614198 KLHDC7AQ5VTJ3 777 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 HGSNATQ68CP4 663 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 MTHFD1LQ6UB35 978 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 STXBP4Q6ZWJ1 553 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 TAS1R2Q8TE23 839 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 PSPC1Q8WXF1 523 aaKnown RBP10.63□□□□□ -0.71
GGA3-221ENST00000614198 MS4A14Q96JA4 679 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 FAM210AQ96ND0 272 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 SLC12A6Q9UHW9 1150 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 CORO1CQ9ULV4 474 aaPredicted RBP10.63□□□□□ -0.71
GGA3-221ENST00000614198 HYOU1Q9Y4L1 999 aa10.63□□□□□ -0.71
GGA3-221ENST00000614198 DKC1O60832 514 aaKnown RBP eCLIP10.62□□□□□ -0.71
GGA3-221ENST00000614198 HEXIM1O94992 359 aaKnown RBP10.62□□□□□ -0.71
GGA3-221ENST00000614198 RGS2P41220 211 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 CARSP49589 748 aaKnown RBP10.62□□□□□ -0.71
GGA3-221ENST00000614198 ZBED6P86452 979 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 STRN3Q13033 797 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 DGKDQ16760 1214 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
GGA3-221ENST00000614198 OR5B17Q8NGF7 314 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 SPIRE2Q8WWL2 714 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 PACSIN1Q9BY11 444 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 HES2Q9Y543 173 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 IGKV6-21A0A0C4DH24 114 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 GFPT2O94808 682 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 GNA14O95837 355 aa10.62□□□□□ -0.71
GGA3-221ENST00000614198 NAMPTP43490 491 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms