RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 KLHL11Q9NVR0 708 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 WEE2P0C1S8 567 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 TGFB2P61812 414 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 GPS1Q13098 491 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 KRT81Q14533 505 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 SLFN11Q7Z7L1 901 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 DPP9Q86TI2 863 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 C7orf31Q8N865 590 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 ZNF606Q8WXB4 792 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 ELMO3Q96BJ8 720 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 PITPNM3Q9BZ71 974 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 FAM129AQ9BZQ8 928 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 FAM49AQ9H0Q0 323 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 AJAP1Q9UKB5 411 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 PCDHA3Q9Y5H8 950 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 TMEM120BA0PK00 339 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 RBP3P10745 1247 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 SDC4P31431 198 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 TCF7P36402 384 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 GPC3P51654 580 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 CENPCQ03188 943 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 CLEC16AQ2KHT3 1053 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 PPP6R3Q5H9R7 873 aaPredicted RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 BSPRYQ5W0U4 402 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 ZPBP2Q6X784 338 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 RASGEF1CQ8N431 466 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 TTC25Q96NG3 672 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 CGRRF1Q99675 332 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 CDC42EP4Q9H3Q1 356 aaKnown RBP6.76□□□□□ -1.33
SNX13-213ENST00000611725 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.76□□□□□ -1.33
SNX13-213ENST00000611725 CYP39A1Q9NYL5 469 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 WDR35Q9P2L0 1181 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 RIPK3Q9Y572 518 aa6.76□□□□□ -1.33
SNX13-213ENST00000611725 N4BP2Q86UW6 1770 aaPredicted RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 ADCY3O60266 1144 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 MCL1Q07820 350 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 PSMD6Q15008 389 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 DUPD1Q68J44 220 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 CATSPER4Q7RTX7 472 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 RGPD2P0DJD1 1756 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 COL18A1P39060 1754 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 SSTR3P32745 418 aaPredicted RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 MSH2P43246 934 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 ARSEP51690 589 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 PPATQ06203 517 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 MYO1EQ12965 1108 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 PDIA2Q13087 525 aaKnown RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 EAPPQ56P03 285 aaPredicted RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 KCNV1Q6PIU1 500 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 METTL7BQ6UX53 244 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 C3orf20Q8ND61 904 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 FEZF2Q8TBJ5 459 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 COG5Q9UP83 839 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 COQ4Q9Y3A0 265 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 PKD1L3Q7Z443 1732 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 INHBAP08476 426 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 RPL21P46778 160 aaKnown RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 P3H1Q32P28 736 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 FAM133BQ5BKY9 247 aaKnown RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 C6orf163Q5TEZ5 329 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 TRIM50Q86XT4 487 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 BRSK2Q8IWQ3 736 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 KCTD6Q8NC69 237 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 GDAP1Q8TB36 358 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 SGSM3Q96HU1 749 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 MCEEQ96PE7 176 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 MAD1L1Q9Y6D9 718 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 M0QYV0 167 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 CHUKO15111 745 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 PPFIA2O75334 1257 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 TTC4O95801 387 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 MT-ND3P03897 115 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 BCAR1P56945 870 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 DGKZQ13574 1117 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 RCOR2Q8IZ40 523 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 NLRP7Q8WX94 980 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 CLEC4DQ8WXI8 215 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 SEMA4DQ92854 862 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 ZBTB45Q96K62 511 aaPredicted RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 CHST7Q9NS84 486 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 FGFR1OP2Q9NVK5 253 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 FSCN2O14926 492 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 CST8O60676 142 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 CAND2O75155 1236 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 TGFB3P10600 412 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 UBA1P22314 1058 aaKnown RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 CCNG2Q16589 344 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 KCTD19Q17RG1 926 aaPredicted RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 HP1BP3Q5SSJ5 553 aaPredicted RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 FAM102AQ5T9C2 384 aaPredicted RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 CASC4Q6P4E1 433 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 TTC39CQ8N584 583 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 HELQQ8TDG4 1101 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 EPS8L3Q8TE67 593 aaKnown RBP6.75□□□□□ -1.33
SNX13-213ENST00000611725 VCPIP1Q96JH7 1222 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 ELP3Q9H9T3 547 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 SENP1Q9P0U3 644 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 NEU2Q9Y3R4 380 aa6.75□□□□□ -1.33
SNX13-213ENST00000611725 ZBED1O96006 694 aa6.74□□□□□ -1.33
SNX13-213ENST00000611725 NUDT17P0C025 328 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms