RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 GOLGA8IPA6NC78 632 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 GOLGA8JA6NMD2 632 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 HNRNPDLO14979 420 aaKnown RBP9.42□□□□□ -0.9
SNCA-212ENST00000611107 DCXO43602 365 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 KINO60870 393 aaKnown RBP9.42□□□□□ -0.9
SNCA-212ENST00000611107 GCNT3O95395 438 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 PAPLNO95428 1278 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 SEC24AO95486 1093 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 PDGFBP01127 241 aaPredicted RBP9.42□□□□□ -0.9
SNCA-212ENST00000611107 RPN1P04843 607 aaKnown RBP9.42□□□□□ -0.9
SNCA-212ENST00000611107 CLTAP09496 248 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 HOXB8P17481 243 aaPredicted RBP9.42□□□□□ -0.9
SNCA-212ENST00000611107 COL9A1P20849 921 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 SCP2P22307 547 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 OR1D2P34982 312 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 MRPL58Q14197 206 aaKnown RBP9.42□□□□□ -0.9
SNCA-212ENST00000611107 KMT5BQ4FZB7 885 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 L1TD1Q5T7N2 865 aaKnown RBP9.42□□□□□ -0.9
SNCA-212ENST00000611107 KREMEN2Q8NCW0 462 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 CXorf38Q8TB03 319 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 RSAD2Q8WXG1 361 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 KIF12Q96FN5 646 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 MYADMQ96S97 322 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 TMEM209Q96SK2 561 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 CBWD1Q9BRT8 395 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 EMILIN2Q9BXX0 1053 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 CRISPLD1Q9H336 500 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 EXOC1Q9NV70 894 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 HCFC1R1Q9NWW0 138 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 MTRRQ9UBK8 725 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 KCNG1Q9UIX4 513 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 FBXW11Q9UKB1 542 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 MUC6Q6W4X9 2439 aa9.42□□□□□ -0.9
SNCA-212ENST00000611107 PTPRJQ12913 1337 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 WDR27A2RRH5 827 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 EIF3DO15371 548 aaKnown RBP eCLIP9.41□□□□□ -0.9
SNCA-212ENST00000611107 GPR37L1O60883 481 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 RHOBTB3O94955 611 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 GLUD1P00367 558 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 ADH1AP07327 375 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 OR4Q2P0C623 313 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 MATR3P43243 847 aaKnown RBP eCLIP9.41□□□□□ -0.9
SNCA-212ENST00000611107 YARSP54577 528 aaKnown RBP9.41□□□□□ -0.9
SNCA-212ENST00000611107 ITIH3Q06033 890 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 STK4Q13043 487 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 ALCAMQ13740 583 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 BMT2Q1RMZ1 405 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 VARS2Q5ST30 1063 aaKnown RBP9.41□□□□□ -0.9
SNCA-212ENST00000611107 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.41□□□□□ -0.9
SNCA-212ENST00000611107 HFE2Q6ZVN8 426 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 SPATA20Q8TB22 786 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 GPT2Q8TD30 523 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 SCFD1Q8WVM8 642 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 FAM212AQ96EL1 285 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 SUSD3Q96L08 255 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 MSTO1Q9BUK6 570 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 PCIF1Q9H4Z3 704 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 SFXN1Q9H9B4 322 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 SLC39A2Q9NP94 309 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 DZANK1Q9NVP4 752 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 LIMD1Q9UGP4 676 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 CDY1Q9Y6F8 540 aa9.41□□□□□ -0.9
SNCA-212ENST00000611107 CCL16O15467 120 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 TGFB1I1O43294 461 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 ZMYND10O75800 440 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 LRPAP1P30533 357 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 ABCD1P33897 745 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 AARSP49588 968 aaKnown RBP eCLIP9.4□□□□□ -0.9
SNCA-212ENST00000611107 ZXDAP98168 799 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 ROR1Q01973 937 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 RAB33AQ14088 237 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 KCNB1Q14721 858 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 CCDC142Q17RM4 750 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 IER5LQ5T953 404 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 SPATA1Q5VX52 437 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 C9orf57Q5W0N0 161 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 LMBRD2Q68DH5 695 aaPredicted RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 PPFIBP1Q86W92 1011 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 ELOA2Q8IYF1 753 aaPredicted RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 SMYD4Q8IYR2 804 aaPredicted RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 TTC9BQ8N6N2 239 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 CMASQ8NFW8 434 aaPredicted RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 ITFG1Q8TB96 612 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 SMG7Q92540 1137 aaKnown RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 ASIC4Q96FT7 647 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 BORCS6Q96GS4 357 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 UROC1Q96N76 676 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 RTP3Q9BQQ7 232 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 RPP25Q9BUL9 199 aaKnown RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 GZF1Q9H116 711 aaPredicted RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 RPF1Q9H9Y2 349 aaKnown RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 TOPORSQ9NS56 1045 aaPredicted RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 FBXL5Q9UKA1 691 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 AGO2Q9UKV8 859 aaKnown RBP9.4□□□□□ -0.9
SNCA-212ENST00000611107 FAM50BQ9Y247 325 aa9.4□□□□□ -0.9
SNCA-212ENST00000611107 OBSL1O75147 1896 aa9.4□□□□□ -0.91
SNCA-212ENST00000611107 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 ANO9A1A5B4 782 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 CARNS1A5YM72 827 aa9.39□□□□□ -0.91
SNCA-212ENST00000611107 GOLGA6L22H0YM25 854 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms