RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 TMEM130Q8N3G9 435 aa23.75■■□□□ 1.39
PPFIA3-208ENST00000602726 TDRD5Q8NAT2 981 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-208ENST00000602726 APPL2Q8NEU8 664 aa23.75■■□□□ 1.39
PPFIA3-208ENST00000602726 SMG7Q92540 1137 aaKnown RBP23.75■■□□□ 1.39
PPFIA3-208ENST00000602726 FAM213AQ9BRX8 229 aa23.75■■□□□ 1.39
PPFIA3-208ENST00000602726 RHOBTB2Q9BYZ6 727 aa23.75■■□□□ 1.39
PPFIA3-208ENST00000602726 SCAND2PQ9GZW5 306 aaPredicted RBP23.75■■□□□ 1.39
PPFIA3-208ENST00000602726 BLZF1Q9H2G9 400 aa23.75■■□□□ 1.39
PPFIA3-208ENST00000602726 PIDD1Q9HB75 910 aa23.75■■□□□ 1.39
PPFIA3-208ENST00000602726 C2CD4DB7Z1M9 353 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 H7C4K7 107 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 TULP1O00294 542 aaPredicted RBP23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 ZMYND10O75800 440 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 NFICP08651 508 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 FAM26FQ5R3K3 315 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 CRELD2Q6UXH1 353 aaPredicted RBP23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 RSPO2Q6UXX9 243 aaPredicted RBP23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 UNC13DQ70J99 1090 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 GLIS3Q8NEA6 775 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 SAAL1Q96ER3 474 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 PRKD2Q9BZL6 878 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 SERTAD1Q9UHV2 236 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 PCDHB8Q9UN66 801 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 USTQ9Y2C2 406 aa23.74■■□□□ 1.39
PPFIA3-208ENST00000602726 A0A1B0GVL5 298 aa23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 FAM86C2PA6NEL3 165 aa23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 GPR37L1O60883 481 aa23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 IL18RAPO95256 599 aa23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 LDHAP00338 332 aaKnown RBP23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 SLFN14P0C7P3 912 aa23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 PFKFB1P16118 471 aa23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 CASP1P29466 404 aa23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 ZNF707Q96C28 371 aaPredicted RBP23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 ACSF2Q96CM8 615 aaPredicted RBP23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 C2CD2Q9Y426 696 aa23.73■■□□□ 1.39
PPFIA3-208ENST00000602726 C2orf16Q68DN1 1984 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 EIF3DO15371 548 aaKnown RBP eCLIP23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 C8AP07357 584 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 CTXN3Q4LDR2 81 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 PPM1LQ5SGD2 360 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 SLC8B1Q6J4K2 584 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 ARMCX5Q6P1M9 558 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 DSTYKQ6XUX3 929 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 OTOP3Q7RTS5 596 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 GRAMD1CQ8IYS0 662 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 PLCD3Q8N3E9 789 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 NOC3LQ8WTT2 800 aaKnown RBP23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 CBWD1Q9BRT8 395 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 PCIF1Q9H4Z3 704 aa23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 WDR6Q9NNW5 1121 aaKnown RBP23.72■■□□□ 1.39
PPFIA3-208ENST00000602726 TRIOO75962 3097 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 PVALEFA0A1B0GWK0 134 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 M0QZQ0 153 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 ACTN4O43707 911 aaKnown RBP23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 PAPLNO95428 1278 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 ARPP19P56211 112 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 CUL4BQ13620 913 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 MRPL58Q14197 206 aaKnown RBP23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 C9orf57Q5W0N0 161 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 ZDHHC14Q8IZN3 488 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 EDAQ92838 391 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 LRFN3Q9BTN0 628 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 C11orf16Q9NQ32 467 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 RBAKQ9NYW8 714 aaPredicted RBP23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 USP25Q9UHP3 1055 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 FBXL5Q9UKA1 691 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 TCHHQ07283 1943 aa23.71■■□□□ 1.39
PPFIA3-208ENST00000602726 CLUHO75153 1309 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 GOLGA8IPA6NC78 632 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 GOLGA8JA6NMD2 632 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 PPEF2O14830 753 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 EXTL3O43909 919 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 HNRNPA1P09651 372 aaKnown RBP eCLIP23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 PAX3P23760 479 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 AARSP49588 968 aaKnown RBP eCLIP23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 ROR1Q01973 937 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 PTPN21Q16825 1174 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 UVSSAQ2YD98 709 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 ZNF280DQ6N043 979 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 EPM2AIP1Q7L775 607 aaPredicted RBP23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 BRSK2Q8IWQ3 736 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 ZSWIM2Q8NEG5 633 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 SLC7A14Q8TBB6 771 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 ZNF507Q8TCN5 953 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 PAGE5Q96GU1 130 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 DPP3Q9NY33 737 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 HPSEQ9Y251 543 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 ANK1P16157 1881 aa23.7■■□□□ 1.38
PPFIA3-208ENST00000602726 KIAA0391O15091 583 aaKnown RBP23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 TBC1D4O60343 1298 aa23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 HOXA9P31269 272 aa23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 ELF1P32519 619 aa23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 HOXD13P35453 343 aa23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 LILRA4P59901 499 aa23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 NUCB2P80303 420 aa23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 YWHAHQ04917 246 aaPredicted RBP23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 EHHADHQ08426 723 aa23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 USP37Q86T82 979 aa23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 NT5DC4Q86YG4 428 aa23.69■■□□□ 1.38
PPFIA3-208ENST00000602726 ZNF461Q8TAF7 563 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms