RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 KXD1Q9BQD3 176 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 REEP2Q9BRK0 252 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 BLOC1S4Q9NUP1 217 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 TUBGCP4Q9UGJ1 667 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 MAFFQ9ULX9 164 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 PCDHB8Q9UN66 801 aa18.52■□□□□ 0.56
SCAF1-204ENST00000601038 KANSL1LA0AUZ9 987 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 ECI2O75521 394 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 MICAL2O94851 1124 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 CYP3A5P20815 502 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 MARCKSP29966 332 aaPredicted RBP18.51■□□□□ 0.55
SCAF1-204ENST00000601038 LIG4P49917 911 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 ZNF131P52739 623 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 PRKCQQ04759 706 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 MLF2Q15773 248 aaPredicted RBP18.51■□□□□ 0.55
SCAF1-204ENST00000601038 BRAPQ7Z569 592 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 MYCT1Q8N699 235 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 TSPAN18Q96SJ8 248 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 DDX23Q9BUQ8 820 aaKnown RBP18.51■□□□□ 0.55
SCAF1-204ENST00000601038 FOXQ1Q9C009 403 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 SEMA4AQ9H3S1 761 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 AFF4Q9UHB7 1163 aaKnown RBP18.51■□□□□ 0.55
SCAF1-204ENST00000601038 TBX20Q9UMR3 447 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 UBQLN1Q9UMX0 589 aaKnown RBP18.51■□□□□ 0.55
SCAF1-204ENST00000601038 INSL5Q9Y5Q6 135 aa18.51■□□□□ 0.55
SCAF1-204ENST00000601038 PDCD11Q14690 1871 aaKnown RBP18.51■□□□□ 0.55
SCAF1-204ENST00000601038 USP34Q70CQ2 3546 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 M0QZQ0 153 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 ZNF197O14709 1029 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 HNRNPDLO14979 420 aaKnown RBP18.5■□□□□ 0.55
SCAF1-204ENST00000601038 FAM13AO94988 1023 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 OAZ2O95190 189 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 PIGRP01833 764 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 LONP1P36776 959 aaKnown RBP18.5■□□□□ 0.55
SCAF1-204ENST00000601038 TNFSF9P41273 254 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 PPP2R3AQ06190 1150 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 SPAG1Q07617 926 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 ADCY1Q08828 1119 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 DHX8Q14562 1220 aaKnown RBP18.5■□□□□ 0.55
SCAF1-204ENST00000601038 PRSS36Q5K4E3 855 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 C1orf210Q8IVY1 113 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 LRRC15Q8TF66 581 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 KIF12Q96FN5 646 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 CORO1BQ9BR76 489 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 OXCT2Q9BYC2 517 aaPredicted RBP18.5■□□□□ 0.55
SCAF1-204ENST00000601038 PARVGQ9HBI0 331 aa18.5■□□□□ 0.55
SCAF1-204ENST00000601038 RIF1Q5UIP0 2472 aaKnown RBP18.49■□□□□ 0.55
SCAF1-204ENST00000601038 LACTBL1A8MY62 500 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 OGTO15294 1046 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 XPOTO43592 962 aaKnown RBP18.49■□□□□ 0.55
SCAF1-204ENST00000601038 TRAK2O60296 914 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 FAM189A1O60320 539 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 ADRB2P07550 413 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 GLULP15104 373 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 CEBPBP17676 345 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 YWHAHQ04917 246 aaPredicted RBP18.49■□□□□ 0.55
SCAF1-204ENST00000601038 MCM6Q14566 821 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 POTEHQ6S545 545 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 ELMOD1Q8N336 334 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 RAD54LQ92698 747 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 ELSPBP1Q96BH3 223 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 OSBPL6Q9BZF3 934 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 RPF1Q9H9Y2 349 aaKnown RBP18.49■□□□□ 0.55
SCAF1-204ENST00000601038 FAM186AA6NE01 2351 aa18.49■□□□□ 0.55
SCAF1-204ENST00000601038 A0A0B4J269 797 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 K7ENM7 598 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 KRT18P05783 430 aaKnown RBP18.48■□□□□ 0.55
SCAF1-204ENST00000601038 CPB1P15086 417 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 PLCG1P19174 1290 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 ABCD1P33897 745 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 AARSP49588 968 aaKnown RBP eCLIP18.48■□□□□ 0.55
SCAF1-204ENST00000601038 GRIN1Q05586 938 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 KARSQ15046 597 aaKnown RBP18.48■□□□□ 0.55
SCAF1-204ENST00000601038 SF3A1Q15459 793 aaKnown RBP18.48■□□□□ 0.55
SCAF1-204ENST00000601038 ENOX2Q16206 610 aaKnown RBP18.48■□□□□ 0.55
SCAF1-204ENST00000601038 CYP4A22Q5TCH4 519 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 TANGO2Q6ICL3 276 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 IQCEQ6IPM2 695 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 PDZD4Q76G19 769 aaPredicted RBP18.48■□□□□ 0.55
SCAF1-204ENST00000601038 ADSSL1Q8N142 457 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 TMEM130Q8N3G9 435 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 BEST2Q8NFU1 509 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 RASSF8Q8NHQ8 419 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 TCEAL4Q96EI5 215 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 ZNF512Q96ME7 567 aaPredicted RBP18.48■□□□□ 0.55
SCAF1-204ENST00000601038 PLA2G2FQ9BZM2 168 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 CCSER1Q9C0I3 900 aa18.48■□□□□ 0.55
SCAF1-204ENST00000601038 LRRN2O75325 713 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 DDIT3P35638 169 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 CCR2P41597 374 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 GTF2BQ00403 316 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 TWF1Q12792 350 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 ZBTB41Q5SVQ8 909 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 RNF19BQ6ZMZ0 732 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 USP37Q86T82 979 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 CD302Q8IX05 232 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 LEMD2Q8NC56 503 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 FIZ1Q96SL8 496 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 NELL2Q99435 816 aa18.47■□□□□ 0.55
SCAF1-204ENST00000601038 MSTO1Q9BUK6 570 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms