RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 DDX4Q9NQI0 724 aaKnown RBP16.48■□□□□ 0.23
IRF3-219ENST00000597636 C2CD2LO14523 706 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 RPA3P35244 121 aaPredicted RBP16.48■□□□□ 0.23
IRF3-219ENST00000597636 ZNF76P36508 570 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 CDR2Q01850 454 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 OCRLQ01968 901 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 CENPCQ03188 943 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 CCDC6Q16204 474 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 SNX30Q5VWJ9 437 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 RFWD3Q6PCD5 774 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 NLRP9Q7RTR0 991 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 TDRPQ86YL5 185 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 KREMEN1Q96MU8 473 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 STRA6Q9BX79 667 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 AMNQ9BXJ7 453 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 KCNQ5Q9NR82 932 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 SCOCQ9UIL1 159 aa16.48■□□□□ 0.23
IRF3-219ENST00000597636 SESN3P58005 492 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 CTC1Q2NKJ3 1217 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 C1orf220Q5T0J3 134 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 SLC30A10Q6XR72 485 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 OTOP1Q7RTM1 612 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 OTOAQ7RTW8 1153 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 CLNKQ7Z7G1 428 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 SMC6Q96SB8 1091 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 PCIF1Q9H4Z3 704 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 COL24A1Q17RW2 1714 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 SKIP12755 728 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 SLC1A5Q15758 541 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 PKN2Q16513 984 aaKnown RBP16.47■□□□□ 0.23
IRF3-219ENST00000597636 MTDHQ86UE4 582 aaKnown RBP16.47■□□□□ 0.23
IRF3-219ENST00000597636 ZCCHC9Q8N567 271 aaKnown RBP16.47■□□□□ 0.23
IRF3-219ENST00000597636 KIFAP3Q92845 792 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 CADM1Q9BY67 442 aaKnown RBP16.47■□□□□ 0.23
IRF3-219ENST00000597636 SENP1Q9P0U3 644 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 ANAPC7Q9UJX3 599 aa16.47■□□□□ 0.23
IRF3-219ENST00000597636 KRT15P19012 456 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 CA4P22748 312 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 MAPK4P31152 587 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 RCN2Q14257 317 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 DSTYKQ6XUX3 929 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 CEP128Q6ZU80 1094 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 C4orf33Q8N1A6 199 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 FOXP3Q9BZS1 431 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 BBOX1O75936 387 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 GSTA2P09210 222 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 CYP11B1P15538 503 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 SNAP25P60880 206 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 RCN1Q15293 331 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 SLC5A9Q2M3M2 681 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 ACAD10Q6JQN1 1059 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 PPM1KQ8N3J5 372 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 FLAD1Q8NFF5 587 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 ZNF398Q8TD17 642 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 SCG3Q8WXD2 468 aaKnown RBP16.46■□□□□ 0.23
IRF3-219ENST00000597636 SHC3Q92529 594 aa16.46■□□□□ 0.23
IRF3-219ENST00000597636 ZNF75CPQ92670 426 aaPredicted RBP16.46■□□□□ 0.23
IRF3-219ENST00000597636 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.46■□□□□ 0.233e-7■■■■■ 53.4
IRF3-219ENST00000597636 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.46■□□□□ 0.23
IRF3-219ENST00000597636 FAM196BA6NMK8 535 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 POC1B-GALNT4F8VUJ3 575 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 CHMP2AO43633 222 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 CYP3A4P08684 503 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 GTF2IP78347 998 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 CCNG2Q16589 344 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 USH1GQ495M9 461 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 HHATQ5VTY9 493 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 PHC3Q8NDX5 983 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 DCAF4Q8WV16 495 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 NRG4Q8WWG1 115 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 TRAPPC9Q96Q05 1148 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 HEMGNQ9BXL5 484 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 DBNDD1Q9H9R9 158 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 IGLV3-22A0A075B6J6 115 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 CCDC22O60826 627 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 FGFR1P11362 822 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 KLF1Q13351 362 aaPredicted RBP16.45■□□□□ 0.22
IRF3-219ENST00000597636 PDCD2Q16342 344 aaPredicted RBP16.45■□□□□ 0.22
IRF3-219ENST00000597636 PLEKHG4Q58EX7 1191 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 SLFN13Q68D06 897 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 ANKS1BQ7Z6G8 1248 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 LARGE2Q8N3Y3 721 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 DDX27Q96GQ7 796 aaKnown RBP16.45■□□□□ 0.22
IRF3-219ENST00000597636 TRIM4Q9C037 500 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 NPHS2Q9NP85 383 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 SAYSD1Q9NPB0 183 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 KCND2Q9NZV8 630 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 NUMBLQ9Y6R0 609 aa16.45■□□□□ 0.22
IRF3-219ENST00000597636 TISP43B9A030 160 aa16.44■□□□□ 0.22
IRF3-219ENST00000597636 G3V3G9 751 aa16.44■□□□□ 0.22
IRF3-219ENST00000597636 TYROBPO43914 113 aa16.44■□□□□ 0.22
IRF3-219ENST00000597636 ATP9AO75110 1047 aa16.44■□□□□ 0.22
IRF3-219ENST00000597636 ZWINTO95229 277 aa16.44■□□□□ 0.22
IRF3-219ENST00000597636 HOXA13P31271 388 aaPredicted RBP16.44■□□□□ 0.22
IRF3-219ENST00000597636 MXI1P50539 228 aa16.44■□□□□ 0.22
IRF3-219ENST00000597636 MFAP3P55082 362 aa16.44■□□□□ 0.22
IRF3-219ENST00000597636 DCAF8Q5TAQ9 597 aa16.44■□□□□ 0.22
IRF3-219ENST00000597636 FYB2Q5VWT5 728 aa16.44■□□□□ 0.22
IRF3-219ENST00000597636 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.44■□□□□ 0.22
IRF3-219ENST00000597636 FBXO11Q86XK2 927 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms