RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TMEM119Q4V9L6 283 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 POTEHQ6S545 545 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 DDX12PQ92771 950 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 KCNN1Q92952 543 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 ELSPBP1Q96BH3 223 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 PLIN2Q99541 437 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 CORO1BQ9BR76 489 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 LTB4R2Q9NPC1 389 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 AFF4Q9UHB7 1163 aaKnown RBP26.1■■□□□ 1.77
LSM4-202ENST00000593564 PCDHB8Q9UN66 801 aa26.1■■□□□ 1.77
LSM4-202ENST00000593564 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.1■■□□□ 1.77
LSM4-202ENST00000593564 ZNF197O14709 1029 aa26.09■■□□□ 1.77
LSM4-202ENST00000593564 CXCL8P10145 99 aa26.09■■□□□ 1.77
LSM4-202ENST00000593564 UBXN2BQ14CS0 331 aa26.09■■□□□ 1.77
LSM4-202ENST00000593564 MAML2Q8IZL2 1156 aaPredicted RBP26.09■■□□□ 1.77
LSM4-202ENST00000593564 PLA2G2FQ9BZM2 168 aa26.09■■□□□ 1.77
LSM4-202ENST00000593564 LARSQ9P2J5 1176 aaKnown RBP26.09■■□□□ 1.77
LSM4-202ENST00000593564 MTF2Q9Y483 593 aaPredicted RBP26.09■■□□□ 1.77
LSM4-202ENST00000593564 COL4A3Q01955 1670 aa26.09■■□□□ 1.77
LSM4-202ENST00000593564 DCHS1Q96JQ0 3298 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 FAM170BA6NMN3 283 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 H3BQV1 296 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 CLTAP09496 248 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 MAGEA9P43362 315 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 NCKAP1LP55160 1127 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 TANGO2Q6ICL3 276 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 TCEAL4Q96EI5 215 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 TMX3Q96JJ7 454 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 HAPLN2Q9GZV7 340 aa26.08■■□□□ 1.77
LSM4-202ENST00000593564 NPHP3-ACAD11A0A0J9YXS1 232 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 TTC26A0AVF1 554 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 SLC26A4O43511 780 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 FCARP24071 287 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 GJB2P29033 226 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 LRPAP1P30533 357 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 ARSHQ5FYA8 562 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 TPRG1Q6ZUI0 275 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 PDZD4Q76G19 769 aaPredicted RBP26.07■■□□□ 1.76
LSM4-202ENST00000593564 ELMOD1Q8N336 334 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 AK8Q96MA6 479 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 NELL2Q99435 816 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 SPATA6Q9NWH7 488 aaPredicted RBP26.07■■□□□ 1.76
LSM4-202ENST00000593564 MIA3Q5JRA6 1907 aa26.07■■□□□ 1.76
LSM4-202ENST00000593564 OTOGLQ3ZCN5 2332 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 PDCD11Q14690 1871 aaKnown RBP26.06■■□□□ 1.76
LSM4-202ENST00000593564 M0QZQ0 153 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 CD72P21854 359 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 MARCKSP29966 332 aaPredicted RBP26.06■■□□□ 1.76
LSM4-202ENST00000593564 CCR2P41597 374 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 MATR3P43243 847 aaKnown RBP eCLIP26.06■■□□□ 1.76
LSM4-202ENST00000593564 CACNB1Q02641 598 aaPredicted RBP26.06■■□□□ 1.76
LSM4-202ENST00000593564 ADCY1Q08828 1119 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 ZBTB6Q15916 424 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 ZNF528Q3MIS6 628 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 ZBTB41Q5SVQ8 909 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 CYP4A22Q5TCH4 519 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 IQCEQ6IPM2 695 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 DNASE1L2Q92874 299 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 BICD1Q96G01 975 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 FBXO4Q9UKT5 387 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 ODF2LQ9ULJ1 636 aa26.06■■□□□ 1.76
LSM4-202ENST00000593564 LAMTOR5O43504 91 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 OAZ2O95190 189 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 CPB1P15086 417 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 CYP3A5P20815 502 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 SCP2P22307 547 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 ID4P47928 161 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 TWF1Q12792 350 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 KYAT1Q16773 422 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 FAM78AQ5JUQ0 283 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 HAUS6Q7Z4H7 955 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 LEMD2Q8NC56 503 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 CLDN23Q96B33 292 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 KIF12Q96FN5 646 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 ZNF512Q96ME7 567 aaPredicted RBP26.05■■□□□ 1.76
LSM4-202ENST00000593564 ASB16Q96NS5 453 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 OXCT2Q9BYC2 517 aaPredicted RBP26.05■■□□□ 1.76
LSM4-202ENST00000593564 ZFP14Q9HCL3 533 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 CEP72Q9P209 647 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 UBQLN1Q9UMX0 589 aaKnown RBP26.05■■□□□ 1.76
LSM4-202ENST00000593564 MYH11P35749 1972 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 FANCMQ8IYD8 2048 aa26.05■■□□□ 1.76
LSM4-202ENST00000593564 FRYLO94915 3013 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 AARSP49588 968 aaKnown RBP eCLIP26.04■■□□□ 1.76
LSM4-202ENST00000593564 EPHA5P54756 1037 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 YWHAHQ04917 246 aaPredicted RBP26.04■■□□□ 1.76
LSM4-202ENST00000593564 SPAG1Q07617 926 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 ZNF852Q6ZMS4 543 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 RNF19BQ6ZMZ0 732 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 TMEM130Q8N3G9 435 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 BEST2Q8NFU1 509 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 BORCS6Q96GS4 357 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 REEP2Q9BRK0 252 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 HEBP1Q9NRV9 189 aa26.04■■□□□ 1.76
LSM4-202ENST00000593564 NRG2O14511 850 aaPredicted RBP26.03■■□□□ 1.76
LSM4-202ENST00000593564 NCAM2O15394 837 aa26.03■■□□□ 1.76
LSM4-202ENST00000593564 FAM189A1O60320 539 aa26.03■■□□□ 1.76
LSM4-202ENST00000593564 PIGRP01833 764 aa26.03■■□□□ 1.76
LSM4-202ENST00000593564 TARSP26639 723 aaKnown RBP26.03■■□□□ 1.76
LSM4-202ENST00000593564 TNFSF9P41273 254 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms