RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 MCM4P33991 863 aa29.57■■■□□ 2.32
SMAD4-213ENST00000591914 VARS2Q5ST30 1063 aaKnown RBP29.57■■■□□ 2.32
SMAD4-213ENST00000591914 STXBP4Q6ZWJ1 553 aa29.57■■■□□ 2.32
SMAD4-213ENST00000591914 USTQ9Y2C2 406 aa29.57■■■□□ 2.32
SMAD4-213ENST00000591914 CDY1Q9Y6F8 540 aa29.57■■■□□ 2.32
SMAD4-213ENST00000591914 ZMYND10O75800 440 aa29.56■■■□□ 2.32
SMAD4-213ENST00000591914 SLFN14P0C7P3 912 aa29.56■■■□□ 2.32
SMAD4-213ENST00000591914 GUCY2FP51841 1108 aa29.56■■■□□ 2.32
SMAD4-213ENST00000591914 EHHADHQ08426 723 aa29.56■■■□□ 2.32
SMAD4-213ENST00000591914 MRPL58Q14197 206 aaKnown RBP29.56■■■□□ 2.32
SMAD4-213ENST00000591914 TMEM132DQ14C87 1099 aa29.56■■■□□ 2.32
SMAD4-213ENST00000591914 UNC13DQ70J99 1090 aa29.56■■■□□ 2.32
SMAD4-213ENST00000591914 BEST2Q8NFU1 509 aa29.56■■■□□ 2.32
SMAD4-213ENST00000591914 C2CD2Q9Y426 696 aa29.56■■■□□ 2.32
SMAD4-213ENST00000591914 TCHHQ07283 1943 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 C2CD4DB7Z1M9 353 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 ACTN4O43707 911 aaKnown RBP29.55■■■□□ 2.32
SMAD4-213ENST00000591914 TBC1D4O60343 1298 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 GPR37L1O60883 481 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 PFKFB1P16118 471 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 CASP1P29466 404 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 AARSP49588 968 aaKnown RBP eCLIP29.55■■■□□ 2.32
SMAD4-213ENST00000591914 FAM26FQ5R3K3 315 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 SLC8B1Q6J4K2 584 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 CCDC149Q6ZUS6 474 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 EPM2AIP1Q7L775 607 aaPredicted RBP29.55■■■□□ 2.32
SMAD4-213ENST00000591914 CEP57L1Q8IYX8 460 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 SCAND2PQ9GZW5 306 aaPredicted RBP29.55■■■□□ 2.32
SMAD4-213ENST00000591914 BLZF1Q9H2G9 400 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 SERTAD1Q9UHV2 236 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 PCDHB8Q9UN66 801 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 HPSEQ9Y251 543 aa29.55■■■□□ 2.32
SMAD4-213ENST00000591914 M0QZQ0 153 aa29.54■■■□□ 2.32
SMAD4-213ENST00000591914 EIF3DO15371 548 aaKnown RBP eCLIP29.54■■■□□ 2.32
SMAD4-213ENST00000591914 HOXD13P35453 343 aa29.54■■■□□ 2.32
SMAD4-213ENST00000591914 AFMP43652 599 aa29.54■■■□□ 2.32
SMAD4-213ENST00000591914 SMG7Q92540 1137 aaKnown RBP29.54■■■□□ 2.32
SMAD4-213ENST00000591914 CBWD1Q9BRT8 395 aa29.54■■■□□ 2.32
SMAD4-213ENST00000591914 FAM213AQ9BRX8 229 aa29.54■■■□□ 2.32
SMAD4-213ENST00000591914 PRKD2Q9BZL6 878 aa29.54■■■□□ 2.32
SMAD4-213ENST00000591914 A0A1B0GVL5 298 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 PVALEFA0A1B0GWK0 134 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 H7C4K7 107 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 IL18RAPO95256 599 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 LDHAP00338 332 aaKnown RBP29.53■■■□□ 2.32
SMAD4-213ENST00000591914 CUL4BQ13620 913 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 TMEM31Q5JXX7 168 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 LIN9Q5TKA1 542 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 TDRD5Q8NAT2 981 aaKnown RBP29.53■■■□□ 2.32
SMAD4-213ENST00000591914 ZSWIM2Q8NEG5 633 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 APPL2Q8NEU8 664 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 SAAL1Q96ER3 474 aa29.53■■■□□ 2.32
SMAD4-213ENST00000591914 WDR6Q9NNW5 1121 aaKnown RBP29.53■■■□□ 2.32
SMAD4-213ENST00000591914 FAM237AA0A1B0GTK4 181 aa29.52■■■□□ 2.32
SMAD4-213ENST00000591914 PPEF2O14830 753 aa29.52■■■□□ 2.32
SMAD4-213ENST00000591914 HOXA9P31269 272 aa29.52■■■□□ 2.32
SMAD4-213ENST00000591914 C9orf57Q5W0N0 161 aa29.52■■■□□ 2.32
SMAD4-213ENST00000591914 BRSK2Q8IWQ3 736 aa29.52■■■□□ 2.32
SMAD4-213ENST00000591914 GRAMD1CQ8IYS0 662 aa29.52■■■□□ 2.32
SMAD4-213ENST00000591914 ZDHHC14Q8IZN3 488 aa29.52■■■□□ 2.32
SMAD4-213ENST00000591914 ZNF507Q8TCN5 953 aa29.52■■■□□ 2.32
SMAD4-213ENST00000591914 USP25Q9UHP3 1055 aa29.52■■■□□ 2.32
SMAD4-213ENST00000591914 ANO9A1A5B4 782 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 FAM86C2PA6NEL3 165 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 PIRO00625 290 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 C8AP07357 584 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 HNRNPA1P09651 372 aaKnown RBP eCLIP29.51■■■□□ 2.31
SMAD4-213ENST00000591914 ROR1Q01973 937 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 ARMCX5Q6P1M9 558 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 NT5DC4Q86YG4 428 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 EFCAB13Q8IY85 973 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 EDAQ92838 391 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 PAGE5Q96GU1 130 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 LRFN3Q9BTN0 628 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 FBXL5Q9UKA1 691 aa29.51■■■□□ 2.31
SMAD4-213ENST00000591914 CLUHO75153 1309 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 UBE4BO95155 1302 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.5■■■□□ 2.31
SMAD4-213ENST00000591914 KIAA0391O15091 583 aaKnown RBP29.5■■■□□ 2.31
SMAD4-213ENST00000591914 EXTL3O43909 919 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 PAX3P23760 479 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 LILRA4P59901 499 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 PTPN21Q16825 1174 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 UVSSAQ2YD98 709 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 RTL10Q7L3V2 364 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 OTOP3Q7RTS5 596 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 PLCD3Q8N3E9 789 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 ZNF461Q8TAF7 563 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 PCIF1Q9H4Z3 704 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 PIDD1Q9HB75 910 aa29.5■■■□□ 2.31
SMAD4-213ENST00000591914 RBAKQ9NYW8 714 aaPredicted RBP29.5■■■□□ 2.31
SMAD4-213ENST00000591914 ABLIM3O94929 683 aa29.49■■■□□ 2.31
SMAD4-213ENST00000591914 OAZ2O95190 189 aa29.49■■■□□ 2.31
SMAD4-213ENST00000591914 WNT7BP56706 349 aa29.49■■■□□ 2.31
SMAD4-213ENST00000591914 CTXN3Q4LDR2 81 aa29.49■■■□□ 2.31
SMAD4-213ENST00000591914 PPM1LQ5SGD2 360 aa29.49■■■□□ 2.31
SMAD4-213ENST00000591914 ZNF280DQ6N043 979 aa29.49■■■□□ 2.31
SMAD4-213ENST00000591914 SLC7A14Q8TBB6 771 aa29.49■■■□□ 2.31
SMAD4-213ENST00000591914 SCFD1Q8WVM8 642 aa29.49■■■□□ 2.31
SMAD4-213ENST00000591914 ACSF2Q96CM8 615 aaPredicted RBP29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms