RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 DEPTORQ8TB45 409 aa14.09□□□□□ -0.15
CSNK1D-222ENST00000584377 TRIM11Q96F44 468 aa14.09□□□□□ -0.15
CSNK1D-222ENST00000584377 SEMA4AQ9H3S1 761 aa14.09□□□□□ -0.15
CSNK1D-222ENST00000584377 LRRC19Q9H756 370 aa14.09□□□□□ -0.15
CSNK1D-222ENST00000584377 SPATS2LQ9NUQ6 558 aaKnown RBP14.09□□□□□ -0.15
CSNK1D-222ENST00000584377 STYXL1Q9Y6J8 313 aa14.09□□□□□ -0.15
CSNK1D-222ENST00000584377 MROH7Q68CQ1 1323 aa14.09□□□□□ -0.15
CSNK1D-222ENST00000584377 SPDYE16A6NNV3 312 aaPredicted RBP14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 FSCN2O14926 492 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 TRAPPC3O43617 180 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 C4BPAP04003 597 aaKnown RBP14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 OATP04181 439 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 MYBL1P10243 752 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 ADCY2Q08462 1091 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 BYSLQ13895 437 aaKnown RBP14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 STXBP2Q15833 593 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 SPRED3Q2MJR0 410 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 C2CD6Q53TS8 623 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 SGO2Q562F6 1265 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 ASAP3Q8TDY4 903 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 C1orf54Q8WWF1 131 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 ART4Q93070 314 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 PORCNQ9H237 461 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 HOXC10Q9NYD6 342 aa14.08□□□□□ -0.15
CSNK1D-222ENST00000584377 PTPRJQ12913 1337 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 TLDC2A0PJX2 215 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 K7ERI5 159 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 GLRA2P23416 452 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 SLMAPQ14BN4 828 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 AP1ARQ63HQ0 302 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 SLC7A3Q8WY07 619 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 SH3GL3Q99963 347 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 OSBPL7Q9BZF2 842 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 CNOT10Q9H9A5 744 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 KIF9Q9HAQ2 790 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 RBAKQ9NYW8 714 aaPredicted RBP14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 ANKFY1Q9P2R3 1169 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 MAFBQ9Y5Q3 323 aaPredicted RBP14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 PAEPP09466 180 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 FGFR4P22455 802 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 SLC1A1P43005 524 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 NAMPTP43490 491 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 CENPCQ03188 943 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 CALCOCO2Q13137 446 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 LLGL2Q6P1M3 1020 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 CRELD2Q6UXH1 353 aaPredicted RBP14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 APOBEC3FQ8IUX4 373 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 KLRG1Q96E93 195 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 CYFIP2Q96F07 1278 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 PGM2Q96G03 612 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 RSRC1Q96IZ7 334 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 ZBTB45Q96K62 511 aaPredicted RBP14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 HAPLN2Q9GZV7 340 aa14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 DHX33Q9H6R0 707 aaKnown RBP14.08□□□□□ -0.16
CSNK1D-222ENST00000584377 SMIM23A6NLE4 172 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 FZD9O00144 591 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 VNN1O95497 513 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 CYP1A1P04798 512 aaPredicted RBP14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 SLFN12LQ6IEE8 588 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 SPDL1Q96EA4 605 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 MSTO1Q9BUK6 570 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 RARGP13631 454 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 ACO1P21399 889 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 CNTN2Q02246 1040 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 KRT17Q04695 432 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 SNX1Q13596 522 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 CUL2Q13617 745 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 ACCSLQ4AC99 568 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 ZBTB41Q5SVQ8 909 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 UBAP2Q5T6F2 1119 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 SEPT14Q6ZU15 432 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 UHMK1Q8TAS1 419 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 RAPGEF5Q92565 580 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 SLCO2A1Q92959 643 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 TARS2Q9BW92 718 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 FAM129AQ9BZQ8 928 aa14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 MYH9P35579 1960 aaKnown RBP14.07□□□□□ -0.16
CSNK1D-222ENST00000584377 RGS16O15492 202 aaPredicted RBP14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 RIPK2O43353 540 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 ATG7O95352 703 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 PIGRP01833 764 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 FSTL1Q12841 308 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 ANKRD20A8PQ5CZ79 823 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 TMEM270Q6UE05 265 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 MON1BQ7L1V2 547 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 CCDC25Q86WR0 208 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 PASD1Q8IV76 773 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 ANKRD35Q8N283 1001 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 C3orf20Q8ND61 904 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 APOBEC3GQ9HC16 384 aaKnown RBP14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 FBXO40Q9UH90 709 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 PCDHB4Q9Y5E5 795 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 LDHAP00338 332 aaKnown RBP14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 ICAM3P32942 547 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 ARL2P36404 184 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 DNERQ8NFT8 737 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 MDM1Q8TC05 714 aa14.06□□□□□ -0.16
CSNK1D-222ENST00000584377 MAIP1Q8WWC4 291 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms