RNA–Protein interactions for RNA: ENST00000583550.1

CCDC178-212, Transcript of coiled-coil domain containing 178, humanhuman

TSL 3

Gene CCDC178, Length 335 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-212ENST00000583550 AFF3P51826 1226 aaKnown RBP5.39□□□□□ -1.55
CCDC178-212ENST00000583550 GFRA1P56159 465 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 RPL11P62913 178 aaKnown RBP5.39□□□□□ -1.55
CCDC178-212ENST00000583550 KCNAB2Q13303 367 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 SHHQ15465 462 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 ALX1Q15699 326 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 INF2Q27J81 1249 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 TRIM60Q495X7 471 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 PRAMEF19Q5SWL8 479 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 GPATCH4Q5T3I0 446 aaKnown RBP5.39□□□□□ -1.55
CCDC178-212ENST00000583550 MBLAC2Q68D91 279 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 IQCA1Q86XH1 822 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 SAMD3Q8N6K7 520 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 KREMEN2Q8NCW0 462 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 ST13P5Q8NFI4 369 aaPredicted RBP5.39□□□□□ -1.55
CCDC178-212ENST00000583550 DNERQ8NFT8 737 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 PLEKHO2Q8TD55 490 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 DCAF4Q8WV16 495 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 ATXN2LQ8WWM7 1075 aaKnown RBP5.39□□□□□ -1.55
CCDC178-212ENST00000583550 ALG3Q92685 438 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 DIO2Q92813 273 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 SGSM3Q96HU1 749 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 BRINP2Q9C0B6 783 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 CCDC113Q9H0I3 377 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 PUS7LQ9H0K6 701 aaKnown RBP5.39□□□□□ -1.55
CCDC178-212ENST00000583550 RWDD1Q9H446 243 aaPredicted RBP5.39□□□□□ -1.55
CCDC178-212ENST00000583550 SLC28A3Q9HAS3 691 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 VTA1Q9NP79 307 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 TOMM22Q9NS69 142 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 MAP3K20Q9NYL2 800 aaKnown RBP5.39□□□□□ -1.55
CCDC178-212ENST00000583550 FBLN5Q9UBX5 448 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 TIMM13Q9Y5L4 95 aaPredicted RBP5.39□□□□□ -1.55
CCDC178-212ENST00000583550 HCFC2Q9Y5Z7 792 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 TRIOBPQ9H2D6 2365 aa5.39□□□□□ -1.55
CCDC178-212ENST00000583550 ZNF213O14771 459 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 EFCAB14O75071 495 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 ASGR1P07306 291 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 CYP2D6P10635 497 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 TOP1P11387 765 aaKnown RBP5.38□□□□□ -1.55
CCDC178-212ENST00000583550 MX1P20591 662 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 MCCP23508 829 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 RFC2P35250 354 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 CDK7P50613 346 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 NCKAP1LP55160 1127 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 PPP2R2AP63151 447 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 NKX3-2P78367 333 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 PPARAQ07869 468 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 MAP4K2Q12851 820 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 SQSTM1Q13501 440 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 BFSP2Q13515 415 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 FSCN1Q16658 493 aaKnown RBP5.38□□□□□ -1.55
CCDC178-212ENST00000583550 MCMDC2Q4G0Z9 681 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 FAM47AQ5JRC9 791 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 AKNAD1Q5T1N1 836 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 KCNV1Q6PIU1 500 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 MFSD6Q6ZSS7 791 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 FAM43BQ6ZT52 329 aaPredicted RBP5.38□□□□□ -1.55
CCDC178-212ENST00000583550 DCP2Q8IU60 420 aaKnown RBP5.38□□□□□ -1.55
CCDC178-212ENST00000583550 KLHDC9Q8NEP7 349 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 TRPV1Q8NER1 839 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 MAFAQ8NHW3 353 aaPredicted RBP5.38□□□□□ -1.55
CCDC178-212ENST00000583550 PHOSPHO2Q8TCD6 241 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 ESR2Q92731 530 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 TNPO1Q92973 898 aaKnown RBP5.38□□□□□ -1.55
CCDC178-212ENST00000583550 TIFAQ96CG3 184 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 CEP95Q96GE4 821 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 CDX2Q99626 313 aaPredicted RBP5.38□□□□□ -1.55
CCDC178-212ENST00000583550 RAVER2Q9HCJ3 691 aaKnown RBP5.38□□□□□ -1.55
CCDC178-212ENST00000583550 TCP11L1Q9NUJ3 509 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 MARCH2Q9P0N8 246 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 ANAPC4Q9UJX5 808 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 TNNQ9UQP3 1299 aa5.38□□□□□ -1.55
CCDC178-212ENST00000583550 RANBP2P49792 3224 aaKnown RBP5.37□□□□□ -1.55
CCDC178-212ENST00000583550 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 A0A1W2PQU0 124 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 PDPK1O15530 556 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 ORC4O43929 436 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 SNAI1O95863 264 aaPredicted RBP5.37□□□□□ -1.55
CCDC178-212ENST00000583550 NTRK1P04629 796 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 ICAM1P05362 532 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 ASGR2P07307 311 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 ALAS1P13196 640 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 CASTP20810 708 aaKnown RBP5.37□□□□□ -1.55
CCDC178-212ENST00000583550 LTBRP36941 435 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 MRPS5P82675 430 aaKnown RBP5.37□□□□□ -1.55
CCDC178-212ENST00000583550 TRDNQ13061 729 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 ITGA7Q13683 1181 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 HSP90AA2PQ14568 343 aaPredicted RBP5.37□□□□□ -1.55
CCDC178-212ENST00000583550 SART3Q15020 963 aaKnown RBP5.37□□□□□ -1.55
CCDC178-212ENST00000583550 SF1Q15637 639 aaKnown RBP5.37□□□□□ -1.55
CCDC178-212ENST00000583550 CCDC96Q2M329 555 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 ANKRD45Q5TZF3 282 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 ANO1Q5XXA6 986 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 ARMCX2Q7L311 632 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 DGKHQ86XP1 1220 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 CCDC103Q8IW40 242 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 PPIL6Q8IXY8 311 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 LRRC47Q8N1G4 583 aaKnown RBP5.37□□□□□ -1.55
CCDC178-212ENST00000583550 Q8N1Y9 231 aa5.37□□□□□ -1.55
CCDC178-212ENST00000583550 TMEM145Q8NBT3 493 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms