RNA–Protein interactions for RNA: ENST00000583550.1

CCDC178-212, Transcript of coiled-coil domain containing 178, humanhuman

TSL 3

Gene CCDC178, Length 335 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-212ENST00000583550 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
CCDC178-212ENST00000583550 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
CCDC178-212ENST00000583550 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
CCDC178-212ENST00000583550 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
CCDC178-212ENST00000583550 FOXD1Q16676 465 aa16.31■□□□□ 0.2
CCDC178-212ENST00000583550 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
CCDC178-212ENST00000583550 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
CCDC178-212ENST00000583550 ADRA2BP18089 450 aa15.52■□□□□ 0.08
CCDC178-212ENST00000583550 PIAS4Q8N2W9 510 aaPredicted RBP15.35■□□□□ 0.05
CCDC178-212ENST00000583550 MSH5O43196 834 aa15.16■□□□□ 0.02
CCDC178-212ENST00000583550 SCAF1Q9H7N4 1312 aaKnown RBP14.3□□□□□ -0.12
CCDC178-212ENST00000583550 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
CCDC178-212ENST00000583550 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
CCDC178-212ENST00000583550 POTEDQ86YR6 584 aa14.04□□□□□ -0.16
CCDC178-212ENST00000583550 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
CCDC178-212ENST00000583550 CNKSR2Q8WXI2 1034 aa13.92□□□□□ -0.18
CCDC178-212ENST00000583550 NCBP3Q53F19 620 aaKnown RBP13.87□□□□□ -0.19
CCDC178-212ENST00000583550 KCNA4P22459 653 aa13.71□□□□□ -0.21
CCDC178-212ENST00000583550 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
CCDC178-212ENST00000583550 HOXD11P31277 338 aaPredicted RBP13.67□□□□□ -0.22
CCDC178-212ENST00000583550 NPM3O75607 178 aaKnown RBP13.62□□□□□ -0.23
CCDC178-212ENST00000583550 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
CCDC178-212ENST00000583550 DNAJC5BQ9UF47 199 aa13.32□□□□□ -0.28
CCDC178-212ENST00000583550 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
CCDC178-212ENST00000583550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.33
CCDC178-212ENST00000583550 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
CCDC178-212ENST00000583550 SLC4A2P04920 1241 aa12.89□□□□□ -0.35
CCDC178-212ENST00000583550 C1QBPQ07021 282 aaKnown RBP12.81□□□□□ -0.36
CCDC178-212ENST00000583550 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
CCDC178-212ENST00000583550 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
CCDC178-212ENST00000583550 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
CCDC178-212ENST00000583550 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
CCDC178-212ENST00000583550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
CCDC178-212ENST00000583550 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
CCDC178-212ENST00000583550 ZBTB22O15209 634 aa12.59□□□□□ -0.39
CCDC178-212ENST00000583550 SAMD1Q6SPF0 538 aaPredicted RBP12.55□□□□□ -0.4
CCDC178-212ENST00000583550 APLP2Q06481 763 aa12.54□□□□□ -0.4
CCDC178-212ENST00000583550 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
CCDC178-212ENST00000583550 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
CCDC178-212ENST00000583550 CAPN15O75808 1086 aa12.42□□□□□ -0.42
CCDC178-212ENST00000583550 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
CCDC178-212ENST00000583550 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
CCDC178-212ENST00000583550 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
CCDC178-212ENST00000583550 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
CCDC178-212ENST00000583550 DSG3P32926 999 aa12.26□□□□□ -0.45
CCDC178-212ENST00000583550 ATF5Q9Y2D1 282 aaPredicted RBP12.23□□□□□ -0.45
CCDC178-212ENST00000583550 ABCB7O75027 752 aa12.14□□□□□ -0.47
CCDC178-212ENST00000583550 POLA2Q14181 598 aa12.09□□□□□ -0.47
CCDC178-212ENST00000583550 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
CCDC178-212ENST00000583550 FBLN2P98095 1184 aa11.8□□□□□ -0.52
CCDC178-212ENST00000583550 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
CCDC178-212ENST00000583550 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.53
CCDC178-212ENST00000583550 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
CCDC178-212ENST00000583550 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
CCDC178-212ENST00000583550 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
CCDC178-212ENST00000583550 SPDYE2Q495Y8 402 aa11.58□□□□□ -0.56
CCDC178-212ENST00000583550 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
CCDC178-212ENST00000583550 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
CCDC178-212ENST00000583550 SSUH2Q9Y2M2 353 aa11.46□□□□□ -0.57
CCDC178-212ENST00000583550 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
CCDC178-212ENST00000583550 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
CCDC178-212ENST00000583550 PABPN1Q86U42 306 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC178-212ENST00000583550 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
CCDC178-212ENST00000583550 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
CCDC178-212ENST00000583550 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
CCDC178-212ENST00000583550 FKBP8Q14318 412 aa11.23□□□□□ -0.61
CCDC178-212ENST00000583550 PROM2Q8N271 834 aa11.2□□□□□ -0.62
CCDC178-212ENST00000583550 CLEC11AQ9Y240 323 aa11.2□□□□□ -0.62
CCDC178-212ENST00000583550 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
CCDC178-212ENST00000583550 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
CCDC178-212ENST00000583550 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC178-212ENST00000583550 POTEHQ6S545 545 aa11.1□□□□□ -0.63
CCDC178-212ENST00000583550 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
CCDC178-212ENST00000583550 PRKAR2AP13861 404 aaKnown RBP10.98□□□□□ -0.65
CCDC178-212ENST00000583550 NISCHQ9Y2I1 1504 aa10.98□□□□□ -0.65
CCDC178-212ENST00000583550 FBXO3Q9UK99 471 aa10.94□□□□□ -0.66
CCDC178-212ENST00000583550 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
CCDC178-212ENST00000583550 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
CCDC178-212ENST00000583550 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
CCDC178-212ENST00000583550 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
CCDC178-212ENST00000583550 MIER1Q8N108 512 aa10.82□□□□□ -0.68
CCDC178-212ENST00000583550 PLCD3Q8N3E9 789 aa10.79□□□□□ -0.68
CCDC178-212ENST00000583550 HAX1O00165 279 aa10.78□□□□□ -0.68
CCDC178-212ENST00000583550 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
CCDC178-212ENST00000583550 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
CCDC178-212ENST00000583550 VASPP50552 380 aaPredicted RBP10.75□□□□□ -0.69
CCDC178-212ENST00000583550 C19orf67A6NJJ6 358 aa10.73□□□□□ -0.69
CCDC178-212ENST00000583550 ZBTB47Q9UFB7 747 aaPredicted RBP10.73□□□□□ -0.69
CCDC178-212ENST00000583550 CD44P16070 742 aaKnown RBP10.66□□□□□ -0.7
CCDC178-212ENST00000583550 EVX2Q03828 476 aa10.63□□□□□ -0.71
CCDC178-212ENST00000583550 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
CCDC178-212ENST00000583550 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
CCDC178-212ENST00000583550 SP7Q8TDD2 431 aaPredicted RBP10.61□□□□□ -0.71
CCDC178-212ENST00000583550 IFNLR1Q8IU57 520 aaPredicted RBP10.58□□□□□ -0.72
CCDC178-212ENST00000583550 ZRANB1Q9UGI0 708 aa10.57□□□□□ -0.72
CCDC178-212ENST00000583550 NUBP1P53384 320 aa10.56□□□□□ -0.72
CCDC178-212ENST00000583550 RASEFQ8IZ41 740 aa10.54□□□□□ -0.72
CCDC178-212ENST00000583550 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
CCDC178-212ENST00000583550 CLCN6P51797 869 aa10.53□□□□□ -0.72
CCDC178-212ENST00000583550 TSPYL2Q9H2G4 693 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms