RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 TOPORSQ9NS56 1045 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-204ENST00000577664 RBAKQ9NYW8 714 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-204ENST00000577664 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
CDK5RAP3-204ENST00000577664 C2CD2Q9Y426 696 aa12.07□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CEP250Q9BV73 2442 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 GOLGA8IPA6NC78 632 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 GOLGA8JA6NMD2 632 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 P4HA2O15460 535 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ITGA4P13612 1032 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 MATR3P43243 847 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 KCNJ6P48051 423 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 VAMP7P51809 220 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 MIIPQ5JXC2 388 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 SMYD5Q6GMV2 418 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 RDH13Q8NBN7 331 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 PLEKHO2Q8TD55 490 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 SLC35C1Q96A29 364 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 EEF2KMTQ96G04 330 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CNOT6LQ96LI5 555 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 TUBGCP2Q9BSJ2 902 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 NXF3Q9H4D5 531 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 SNTG2Q9NY99 539 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 COQ4Q9Y3A0 265 aa12.06□□□□□ -0.48
CDK5RAP3-204ENST00000577664 GTPBP10A4D1E9 387 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 LACTBL1A8MY62 500 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 LOC730098B7Z3J9 87 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 STX10O60499 249 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 OFD1O75665 1012 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 RECQL4O94761 1208 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 C4BPAP04003 597 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ATP1A3P13637 1013 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 KRT13P13646 458 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CYP3A5P20815 502 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 YARSP54577 528 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 SMAD4Q13485 552 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 NR1I3Q14994 352 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 KRT31Q15323 416 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 MAN2A1Q16706 1144 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 SEZ6Q53EL9 994 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 TCEAL5Q5H9L2 206 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 NPAS4Q8IUM7 802 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 WDR49Q8IV35 697 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ZNF516Q92618 1163 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ZBED2Q9BTP6 218 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 RNF19AQ9NV58 838 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 DLL3Q9NYJ7 618 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 KANSL3Q9P2N6 904 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 HES2Q9Y543 173 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 FASNP49327 2511 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 FAM208BQ5VWN6 2430 aa12.05□□□□□ -0.48
CDK5RAP3-204ENST00000577664 MICAL3Q7RTP6 2002 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 A0A1B0GTH6 734 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 SMIM28A0A1B0GU29 152 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ARL5CA6NH57 179 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 LRRIQ3A6PVS8 624 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 HOXA2O43364 376 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CXCL8P10145 99 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 AKAP5P24588 427 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 WNT7BP56706 349 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 DLG4P78352 724 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 KCNH2Q12809 1159 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 GSE1Q14687 1217 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 NAB2Q15742 525 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ST3GAL2Q16842 350 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 DUOXA2Q1HG44 320 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ZACNQ401N2 412 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CCDC40Q4G0X9 1142 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 VWA3BQ502W6 1294 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 RNF214Q8ND24 703 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ANKRD20A12PQ8NF67 263 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CXorf38Q8TB03 319 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CACTINQ8WUQ7 758 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ZNF689Q96CS4 500 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 ZMAT2Q96NC0 199 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 PPP1R10Q96QC0 940 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CGRRF1Q99675 332 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 NDST4Q9H3R1 872 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 NSUN3Q9H649 340 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 RSAD1Q9HA92 442 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 INTS13Q9NVM9 706 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CLDND1Q9NY35 253 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 PCDHB7Q9Y5E2 793 aa12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.04□□□□□ -0.48
CDK5RAP3-204ENST00000577664 CITO14578 2027 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 MEIS3P2A8K0S8 358 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 H3BNC9 293 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 PTGESO14684 152 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 DGKIO75912 1065 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 AFPP02771 609 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 COPB1P53618 953 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 OSTNP61366 133 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 DEFB103AP81534 67 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 FANCCQ00597 558 aa12.03□□□□□ -0.48
CDK5RAP3-204ENST00000577664 PPP3CAQ08209 521 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms