RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 TBX3O15119 743 aa13□□□□□ -0.33
CLK3-222ENST00000568232 DKC1O60832 514 aaKnown RBP eCLIP13□□□□□ -0.33
CLK3-222ENST00000568232 RECQL4O94761 1208 aa13□□□□□ -0.33
CLK3-222ENST00000568232 PRKCBP05771 671 aa13□□□□□ -0.33
CLK3-222ENST00000568232 ATF2P15336 505 aa13□□□□□ -0.33
CLK3-222ENST00000568232 GLRA2P23416 452 aa13□□□□□ -0.33
CLK3-222ENST00000568232 ARL2P36404 184 aa13□□□□□ -0.33
CLK3-222ENST00000568232 NLRP5P59047 1200 aa13□□□□□ -0.33
CLK3-222ENST00000568232 POU5F1BQ06416 359 aa13□□□□□ -0.33
CLK3-222ENST00000568232 AAMPQ13685 434 aa13□□□□□ -0.33
CLK3-222ENST00000568232 PLK5Q496M5 336 aa13□□□□□ -0.33
CLK3-222ENST00000568232 GLRA4Q5JXX5 417 aa13□□□□□ -0.33
CLK3-222ENST00000568232 SLC8B1Q6J4K2 584 aa13□□□□□ -0.33
CLK3-222ENST00000568232 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
CLK3-222ENST00000568232 OTUD6AQ7L8S5 288 aa13□□□□□ -0.33
CLK3-222ENST00000568232 NOSTRINQ8IVI9 506 aa13□□□□□ -0.33
CLK3-222ENST00000568232 YAF2Q8IY57 180 aa13□□□□□ -0.33
CLK3-222ENST00000568232 TCEAL8Q8IYN2 117 aa13□□□□□ -0.33
CLK3-222ENST00000568232 CCDC148Q8NFR7 591 aa13□□□□□ -0.33
CLK3-222ENST00000568232 MSANTD3Q96H12 275 aa13□□□□□ -0.33
CLK3-222ENST00000568232 DYDC2Q96IM9 177 aa13□□□□□ -0.33
CLK3-222ENST00000568232 ZC3H10Q96K80 434 aaKnown RBP13□□□□□ -0.33
CLK3-222ENST00000568232 LRRC3BQ96PB8 259 aa13□□□□□ -0.33
CLK3-222ENST00000568232 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
CLK3-222ENST00000568232 GOLGA2P5Q9HBQ8 144 aa13□□□□□ -0.33
CLK3-222ENST00000568232 ANO2Q9NQ90 1003 aa13□□□□□ -0.33
CLK3-222ENST00000568232 DDX25Q9UHL0 483 aaKnown RBP13□□□□□ -0.33
CLK3-222ENST00000568232 CCDC196A0A1B0GTZ2 297 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 LNP1A1A4G5 178 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 DCLK1O15075 740 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 CHADO15335 359 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 HYAL3O43820 417 aaPredicted RBP12.99□□□□□ -0.33
CLK3-222ENST00000568232 CPA1P15085 419 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 RCAN1P53805 252 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 AKAP17AQ02040 695 aaKnown RBP12.99□□□□□ -0.33
CLK3-222ENST00000568232 CYP4A11Q02928 519 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 CREB5Q02930 508 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 DAB2IPQ5VWQ8 1189 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 C1orf228Q6PIY5 440 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 C19orf48Q6RUI8 117 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 RALGPS2Q86X27 583 aaPredicted RBP12.99□□□□□ -0.33
CLK3-222ENST00000568232 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 ZNF512Q96ME7 567 aaPredicted RBP12.99□□□□□ -0.33
CLK3-222ENST00000568232 ESYT1Q9BSJ8 1104 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 DUSP15Q9H1R2 295 aaPredicted RBP12.99□□□□□ -0.33
CLK3-222ENST00000568232 SLITRK6Q9H5Y7 841 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 GDAQ9Y2T3 454 aa12.99□□□□□ -0.33
CLK3-222ENST00000568232 CAVIN2O95810 425 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 CEACAM1P13688 526 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 TNK2Q07912 1038 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 FCHO2Q0JRZ9 810 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 TWF1Q12792 350 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 EPHA7Q15375 998 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 NTRK3Q16288 839 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 UPP1Q16831 310 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 STXBP5Q5T5C0 1151 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 IQCEQ6IPM2 695 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 TPH2Q8IWU9 490 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 DEFB124Q8NES8 71 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 SHKBP1Q8TBC3 707 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 NFKBIZQ9BYH8 718 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 PDZD7Q9H5P4 517 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 KLK13Q9UKR3 277 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 PCDHA4Q9UN74 947 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
CLK3-222ENST00000568232 ASH1LQ9NR48 2969 aaKnown RBP12.98□□□□□ -0.33
CLK3-222ENST00000568232 A0A087WWV3 80 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 CCDC163A0A0D9SF12 145 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 A0A1W2PRU2 124 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 TMEM189-UBE2V1I3L0A0 370 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 M0R2N6 131 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 CDX4O14627 284 aaPredicted RBP12.97□□□□□ -0.33
CLK3-222ENST00000568232 INF2Q27J81 1249 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 NCAPH2Q6IBW4 605 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 MOXD1Q6UVY6 613 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 ELMOD1Q8N336 334 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 SYNPOQ8N3V7 929 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 HAS1Q92839 578 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 POLR3FQ9H1D9 316 aaPredicted RBP12.97□□□□□ -0.33
CLK3-222ENST00000568232 ZSWIM4Q9H7M6 989 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 KCNMB3Q9NPA1 279 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 ASAH2Q9NR71 780 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 SLC8A2Q9UPR5 921 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 IGSF10Q6WRI0 2623 aa12.97□□□□□ -0.33
CLK3-222ENST00000568232 PDCD11Q14690 1871 aaKnown RBP12.96□□□□□ -0.33
CLK3-222ENST00000568232 BCLAF3A2AJT9 711 aaKnown RBP12.96□□□□□ -0.33
CLK3-222ENST00000568232 LRRIQ4A6NIV6 560 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 PATE3B3GLJ2 98 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 TRAPPC3O43617 180 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 AKAP3O75969 853 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 SLITRK3O94933 977 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 EDN1P05305 212 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 CSRP1P21291 193 aaKnown RBP12.96□□□□□ -0.33
CLK3-222ENST00000568232 EPHA5P54756 1037 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 FGD1P98174 961 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 SOX4Q06945 474 aaPredicted RBP12.96□□□□□ -0.33
CLK3-222ENST00000568232 UAP1L1Q3KQV9 507 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 RNF20Q5VTR2 975 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 EEF1DP3Q658K8 133 aa12.96□□□□□ -0.33
CLK3-222ENST00000568232 Q6ZUG5 572 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms